RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 BEST2Q8NFU1 509 aa16.38■□□□□ 0.21
SS18L1-202ENST00000370848 IPO9Q96P70 1041 aaKnown RBP16.38■□□□□ 0.21
SS18L1-202ENST00000370848 KCTD10Q9H3F6 313 aa16.38■□□□□ 0.21
SS18L1-202ENST00000370848 ASB7Q9H672 318 aa16.38■□□□□ 0.21
SS18L1-202ENST00000370848 HCFC1R1Q9NWW0 138 aa16.38■□□□□ 0.21
SS18L1-202ENST00000370848 NUB1Q9Y5A7 615 aa16.38■□□□□ 0.21
SS18L1-202ENST00000370848 EP300Q09472 2414 aaPredicted RBP16.38■□□□□ 0.21
SS18L1-202ENST00000370848 PTPRJQ12913 1337 aa16.38■□□□□ 0.21
SS18L1-202ENST00000370848 KANSL1LA0AUZ9 987 aa16.37■□□□□ 0.21
SS18L1-202ENST00000370848 SPTLC1O15269 473 aa16.37■□□□□ 0.21
SS18L1-202ENST00000370848 PRPF40AO75400 957 aaKnown RBP16.37■□□□□ 0.21
SS18L1-202ENST00000370848 IL18RAPO95256 599 aa16.37■□□□□ 0.21
SS18L1-202ENST00000370848 LDHAP00338 332 aaKnown RBP16.37■□□□□ 0.21
SS18L1-202ENST00000370848 MAGEA9P43362 315 aa16.37■□□□□ 0.21
SS18L1-202ENST00000370848 AARSP49588 968 aaKnown RBP eCLIP16.37■□□□□ 0.21
SS18L1-202ENST00000370848 EPHA5P54756 1037 aa16.37■□□□□ 0.21
SS18L1-202ENST00000370848 KCNB1Q14721 858 aa16.37■□□□□ 0.21
SS18L1-202ENST00000370848 SLC5A9Q2M3M2 681 aa16.37■□□□□ 0.21
SS18L1-202ENST00000370848 ZNF528Q3MIS6 628 aa16.37■□□□□ 0.21
SS18L1-202ENST00000370848 C9orf57Q5W0N0 161 aa16.37■□□□□ 0.21
SS18L1-202ENST00000370848 POTEHQ6S545 545 aa16.37■□□□□ 0.21
SS18L1-202ENST00000370848 HS2ST1Q7LGA3 356 aa16.37■□□□□ 0.21
SS18L1-202ENST00000370848 C1orf210Q8IVY1 113 aa16.37■□□□□ 0.21
SS18L1-202ENST00000370848 DERAQ9Y315 318 aa16.37■□□□□ 0.21
SS18L1-202ENST00000370848 C2CD2Q9Y426 696 aa16.37■□□□□ 0.21
SS18L1-202ENST00000370848 COL4A3Q01955 1670 aa16.37■□□□□ 0.21
SS18L1-202ENST00000370848 CACNA1IQ9P0X4 2223 aa16.36■□□□□ 0.21
SS18L1-202ENST00000370848 H7C4K7 107 aa16.36■□□□□ 0.21
SS18L1-202ENST00000370848 XPOTO43592 962 aaKnown RBP16.36■□□□□ 0.21
SS18L1-202ENST00000370848 RHOP08100 348 aa16.36■□□□□ 0.21
SS18L1-202ENST00000370848 FCARP24071 287 aa16.36■□□□□ 0.21
SS18L1-202ENST00000370848 TFAMQ00059 246 aaKnown RBP16.36■□□□□ 0.21
SS18L1-202ENST00000370848 POU5F1Q01860 360 aaKnown RBP16.36■□□□□ 0.21
SS18L1-202ENST00000370848 MLF2Q15773 248 aaPredicted RBP16.36■□□□□ 0.21
SS18L1-202ENST00000370848 MAML2Q8IZL2 1156 aaPredicted RBP16.36■□□□□ 0.21
SS18L1-202ENST00000370848 CCDC47Q96A33 483 aaKnown RBP16.36■□□□□ 0.21
SS18L1-202ENST00000370848 TIGD1Q96MW7 591 aa16.36■□□□□ 0.21
SS18L1-202ENST00000370848 TSPAN18Q96SJ8 248 aa16.36■□□□□ 0.21
SS18L1-202ENST00000370848 OXCT2Q9BYC2 517 aaPredicted RBP16.36■□□□□ 0.21
SS18L1-202ENST00000370848 DPP3Q9NY33 737 aa16.36■□□□□ 0.21
SS18L1-202ENST00000370848 FBXL5Q9UKA1 691 aa16.36■□□□□ 0.21
SS18L1-202ENST00000370848 PCDHA5Q9Y5H7 936 aa16.36■□□□□ 0.21
SS18L1-202ENST00000370848 TIMM13Q9Y5L4 95 aaPredicted RBP16.36■□□□□ 0.21
SS18L1-202ENST00000370848 ANO9A1A5B4 782 aa16.35■□□□□ 0.21
SS18L1-202ENST00000370848 ZNF233A6NK53 670 aa16.35■□□□□ 0.21
SS18L1-202ENST00000370848 SHISA7A6NL88 538 aa16.35■□□□□ 0.21
SS18L1-202ENST00000370848 M0QZQ0 153 aa16.35■□□□□ 0.21
SS18L1-202ENST00000370848 PIRO00625 290 aa16.35■□□□□ 0.21
SS18L1-202ENST00000370848 KIAA0391O15091 583 aaKnown RBP16.35■□□□□ 0.21
SS18L1-202ENST00000370848 KINO60870 393 aaKnown RBP16.35■□□□□ 0.21
SS18L1-202ENST00000370848 DCNP07585 359 aaKnown RBP16.35■□□□□ 0.21
SS18L1-202ENST00000370848 SP9P0CG40 484 aa16.35■□□□□ 0.21
SS18L1-202ENST00000370848 PTPN2P17706 415 aa16.35■□□□□ 0.21
SS18L1-202ENST00000370848 SNRNP35Q16560 246 aaKnown RBP16.35■□□□□ 0.21
SS18L1-202ENST00000370848 C12orf56Q8IXR9 622 aa16.35■□□□□ 0.21
SS18L1-202ENST00000370848 ADSSL1Q8N142 457 aa16.35■□□□□ 0.21
SS18L1-202ENST00000370848 C1orf127Q8N9H9 656 aa16.35■□□□□ 0.21
SS18L1-202ENST00000370848 XXYLT1Q8NBI6 393 aa16.35■□□□□ 0.21
SS18L1-202ENST00000370848 OR5B17Q8NGF7 314 aa16.35■□□□□ 0.21
SS18L1-202ENST00000370848 PLEKHO2Q8TD55 490 aa16.35■□□□□ 0.21
SS18L1-202ENST00000370848 NELL1Q92832 810 aa16.35■□□□□ 0.21
SS18L1-202ENST00000370848 DNASE1L2Q92874 299 aa16.35■□□□□ 0.21
SS18L1-202ENST00000370848 CLDN23Q96B33 292 aa16.35■□□□□ 0.21
SS18L1-202ENST00000370848 ELSPBP1Q96BH3 223 aa16.35■□□□□ 0.21
SS18L1-202ENST00000370848 FOXQ1Q9C009 403 aa16.35■□□□□ 0.21
SS18L1-202ENST00000370848 MTMR12Q9C0I1 747 aa16.35■□□□□ 0.21
SS18L1-202ENST00000370848 GZF1Q9H116 711 aaPredicted RBP16.35■□□□□ 0.21
SS18L1-202ENST00000370848 TRPV5Q9NQA5 729 aa16.35■□□□□ 0.21
SS18L1-202ENST00000370848 FBXO4Q9UKT5 387 aa16.35■□□□□ 0.21
SS18L1-202ENST00000370848 MRPS23Q9Y3D9 190 aaKnown RBP16.35■□□□□ 0.21
SS18L1-202ENST00000370848 INSL5Q9Y5Q6 135 aa16.35■□□□□ 0.21
SS18L1-202ENST00000370848 ANK1P16157 1881 aa16.35■□□□□ 0.21
SS18L1-202ENST00000370848 TSC2P49815 1807 aa16.34■□□□□ 0.21
SS18L1-202ENST00000370848 OAZ2O95190 189 aa16.34■□□□□ 0.21
SS18L1-202ENST00000370848 LMNAP02545 664 aaKnown RBP16.34■□□□□ 0.21
SS18L1-202ENST00000370848 RPS9P46781 194 aaKnown RBP16.34■□□□□ 0.21
SS18L1-202ENST00000370848 UBE2HP62256 183 aa16.34■□□□□ 0.21
SS18L1-202ENST00000370848 SNRPFP62306 86 aaKnown RBP16.34■□□□□ 0.21
SS18L1-202ENST00000370848 CYP24A1Q07973 514 aa16.34■□□□□ 0.21
SS18L1-202ENST00000370848 SLC44A4Q53GD3 710 aa16.34■□□□□ 0.21
SS18L1-202ENST00000370848 ISM2Q6H9L7 571 aa16.34■□□□□ 0.21
SS18L1-202ENST00000370848 ZC3H14Q6PJT7 736 aaKnown RBP16.34■□□□□ 0.21
SS18L1-202ENST00000370848 ZNF687Q8N1G0 1237 aa16.34■□□□□ 0.21
SS18L1-202ENST00000370848 LEMD2Q8NC56 503 aa16.34■□□□□ 0.21
SS18L1-202ENST00000370848 CXorf38Q8TB03 319 aa16.34■□□□□ 0.21
SS18L1-202ENST00000370848 SPATA20Q8TB22 786 aa16.34■□□□□ 0.21
SS18L1-202ENST00000370848 SMARCE1Q969G3 411 aa16.34■□□□□ 0.21
SS18L1-202ENST00000370848 CCDC34Q96HJ3 373 aa16.34■□□□□ 0.21
SS18L1-202ENST00000370848 TRPV4Q9HBA0 871 aa16.34■□□□□ 0.21
SS18L1-202ENST00000370848 DMAC2Q9NW81 257 aa16.34■□□□□ 0.21
SS18L1-202ENST00000370848 AFF4Q9UHB7 1163 aaKnown RBP16.34■□□□□ 0.21
SS18L1-202ENST00000370848 PCDHB8Q9UN66 801 aa16.34■□□□□ 0.21
SS18L1-202ENST00000370848 POLIQ9UNA4 740 aa16.34■□□□□ 0.21
SS18L1-202ENST00000370848 PDXKO00764 312 aa16.33■□□□□ 0.2
SS18L1-202ENST00000370848 EXOC3O60645 756 aa16.33■□□□□ 0.2
SS18L1-202ENST00000370848 SEC24AO95486 1093 aa16.33■□□□□ 0.2
SS18L1-202ENST00000370848 LRG1P02750 347 aa16.33■□□□□ 0.2
SS18L1-202ENST00000370848 NR3C1P04150 777 aa16.33■□□□□ 0.2
SS18L1-202ENST00000370848 ITGB3P05106 788 aa16.33■□□□□ 0.2
SS18L1-202ENST00000370848 CEBPBP17676 345 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms