RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 TRADDQ15628 312 aa20.57■□□□□ 0.88
LMO4-202ENST00000370544 PCSK7Q16549 785 aa20.57■□□□□ 0.88
LMO4-202ENST00000370544 SAMD3Q8N6K7 520 aa20.57■□□□□ 0.88
LMO4-202ENST00000370544 IL1R1P14778 569 aa20.57■□□□□ 0.88
LMO4-202ENST00000370544 E2F4Q16254 413 aa20.57■□□□□ 0.88
LMO4-202ENST00000370544 PPP1R36Q96LQ0 422 aa20.57■□□□□ 0.88
LMO4-202ENST00000370544 OGTO15294 1046 aa20.57■□□□□ 0.88
LMO4-202ENST00000370544 NCAM1P13591 858 aa20.57■□□□□ 0.88
LMO4-202ENST00000370544 COILP38432 576 aaPredicted RBP20.57■□□□□ 0.88
LMO4-202ENST00000370544 ZNF484Q5JVG2 852 aa20.57■□□□□ 0.88
LMO4-202ENST00000370544 LRRC8EQ6NSJ5 796 aa20.57■□□□□ 0.88
LMO4-202ENST00000370544 CBWD2Q8IUF1 395 aa20.57■□□□□ 0.88
LMO4-202ENST00000370544 RIMBP3CA6NJZ7 1639 aa20.56■□□□□ 0.88
LMO4-202ENST00000370544 RIMBP3BA6NNM3 1639 aa20.56■□□□□ 0.88
LMO4-202ENST00000370544 RIMBP3Q9UFD9 1639 aa20.56■□□□□ 0.88
LMO4-202ENST00000370544 DDTLA6NHG4 134 aaPredicted RBP20.56■□□□□ 0.88
LMO4-202ENST00000370544 RPAINQ86UA6 219 aa20.56■□□□□ 0.88
LMO4-202ENST00000370544 TMEM106CQ9BVX2 250 aa20.56■□□□□ 0.88
LMO4-202ENST00000370544 SETSIPP0DME0 302 aa20.56■□□□□ 0.88
LMO4-202ENST00000370544 RBP3P10745 1247 aa20.56■□□□□ 0.88
LMO4-202ENST00000370544 MTBPQ96DY7 904 aa20.56■□□□□ 0.88
LMO4-202ENST00000370544 C20orf96Q9NUD7 363 aaPredicted RBP20.56■□□□□ 0.88
LMO4-202ENST00000370544 SPATS2LQ9NUQ6 558 aaKnown RBP20.56■□□□□ 0.88
LMO4-202ENST00000370544 KBTBD4Q9NVX7 518 aa20.56■□□□□ 0.88
LMO4-202ENST00000370544 KIF17Q9P2E2 1029 aa20.56■□□□□ 0.88
LMO4-202ENST00000370544 PLAGL2Q9UPG8 496 aa20.56■□□□□ 0.88
LMO4-202ENST00000370544 RIMS1Q86UR5 1692 aaKnown RBP20.56■□□□□ 0.88
LMO4-202ENST00000370544 FAM47DPA6NHR8 397 aa20.56■□□□□ 0.88
LMO4-202ENST00000370544 KCNJ1P48048 391 aa20.56■□□□□ 0.88
LMO4-202ENST00000370544 STX3Q13277 289 aa20.56■□□□□ 0.88
LMO4-202ENST00000370544 PTK2BQ14289 1009 aa20.56■□□□□ 0.88
LMO4-202ENST00000370544 TRIM45Q9H8W5 580 aaPredicted RBP20.56■□□□□ 0.88
LMO4-202ENST00000370544 SGPL1O95470 568 aa20.56■□□□□ 0.88
LMO4-202ENST00000370544 CARSP49589 748 aaKnown RBP20.56■□□□□ 0.88
LMO4-202ENST00000370544 ST8SIA6P61647 398 aa20.56■□□□□ 0.88
LMO4-202ENST00000370544 PCNX4Q63HM2 1172 aa20.56■□□□□ 0.88
LMO4-202ENST00000370544 SGSM3Q96HU1 749 aa20.56■□□□□ 0.88
LMO4-202ENST00000370544 NSMCE4AQ9NXX6 385 aa20.56■□□□□ 0.88
LMO4-202ENST00000370544 TNS2Q63HR2 1409 aa20.56■□□□□ 0.88
LMO4-202ENST00000370544 TCRBV5S4A2TA0A5A2 114 aa20.56■□□□□ 0.88
LMO4-202ENST00000370544 PRPF4O43172 522 aaKnown RBP eCLIP20.56■□□□□ 0.88
LMO4-202ENST00000370544 PFDN1O60925 122 aa20.56■□□□□ 0.88
LMO4-202ENST00000370544 ERVK-24P63145 666 aa20.56■□□□□ 0.88
LMO4-202ENST00000370544 C3orf62Q6ZUJ4 267 aa20.56■□□□□ 0.88
LMO4-202ENST00000370544 PARP9Q8IXQ6 854 aa20.56■□□□□ 0.88
LMO4-202ENST00000370544 NAGPAQ9UK23 515 aa20.56■□□□□ 0.88
LMO4-202ENST00000370544 NCOA3Q9Y6Q9 1424 aa20.55■□□□□ 0.88
LMO4-202ENST00000370544 NDUFS3O75489 264 aa20.55■□□□□ 0.88
LMO4-202ENST00000370544 SYF2O95926 243 aaKnown RBP20.55■□□□□ 0.88
LMO4-202ENST00000370544 NPTX2P47972 431 aa20.55■□□□□ 0.88
LMO4-202ENST00000370544 SYTL3Q4VX76 610 aa20.55■□□□□ 0.88
LMO4-202ENST00000370544 FAM71DQ8N9W8 422 aa20.55■□□□□ 0.88
LMO4-202ENST00000370544 ZNF473Q8WTR7 871 aaKnown RBP20.55■□□□□ 0.88
LMO4-202ENST00000370544 CEP19Q96LK0 163 aa20.55■□□□□ 0.88
LMO4-202ENST00000370544 TASP1Q9H6P5 420 aa20.55■□□□□ 0.88
LMO4-202ENST00000370544 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.55■□□□□ 0.88
LMO4-202ENST00000370544 POLBP06746 335 aa20.55■□□□□ 0.88
LMO4-202ENST00000370544 DDX42Q86XP3 938 aaKnown RBP eCLIP20.55■□□□□ 0.88
LMO4-202ENST00000370544 ROPN1BQ9BZX4 212 aaPredicted RBP20.55■□□□□ 0.88
LMO4-202ENST00000370544 ROPN1Q9HAT0 212 aaPredicted RBP20.55■□□□□ 0.88
LMO4-202ENST00000370544 NPHS2Q9NP85 383 aa20.55■□□□□ 0.88
LMO4-202ENST00000370544 KLK14Q9P0G3 267 aa20.55■□□□□ 0.88
LMO4-202ENST00000370544 FAM205AQ6ZU69 1335 aa20.55■□□□□ 0.88
LMO4-202ENST00000370544 FOXN3O00409 490 aaPredicted RBP20.55■□□□□ 0.88
LMO4-202ENST00000370544 HMOX2P30519 316 aa20.55■□□□□ 0.88
LMO4-202ENST00000370544 KYNUQ16719 465 aa20.55■□□□□ 0.88
LMO4-202ENST00000370544 COBLL1Q53SF7 1204 aa20.55■□□□□ 0.88
LMO4-202ENST00000370544 PPIL6Q8IXY8 311 aa20.55■□□□□ 0.88
LMO4-202ENST00000370544 SLC25A41Q8N5S1 370 aa20.55■□□□□ 0.88
LMO4-202ENST00000370544 ZSWIM1Q9BR11 485 aa20.55■□□□□ 0.88
LMO4-202ENST00000370544 GGT7Q9UJ14 662 aa20.55■□□□□ 0.88
LMO4-202ENST00000370544 VCAM1P19320 739 aa20.55■□□□□ 0.88
LMO4-202ENST00000370544 FCGRTP55899 365 aa20.55■□□□□ 0.88
LMO4-202ENST00000370544 MPZL3Q6UWV2 235 aa20.55■□□□□ 0.88
LMO4-202ENST00000370544 C4orf22Q6V702 233 aa20.55■□□□□ 0.88
LMO4-202ENST00000370544 MFN1Q8IWA4 741 aa20.55■□□□□ 0.88
LMO4-202ENST00000370544 RAB42Q8N4Z0 105 aa20.55■□□□□ 0.88
LMO4-202ENST00000370544 PXMP2Q9NR77 195 aa20.55■□□□□ 0.88
LMO4-202ENST00000370544 PXDNQ92626 1479 aa20.55■□□□□ 0.88
LMO4-202ENST00000370544 DCCP43146 1447 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 PSTPIP1O43586 416 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 ENO1P06733 434 aaKnown RBP20.54■□□□□ 0.88
LMO4-202ENST00000370544 HIST1H2AGP0C0S8 130 aaPredicted RBP20.54■□□□□ 0.88
LMO4-202ENST00000370544 ODC1P11926 461 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 HIST1H2ADP20671 130 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 SPRP35270 261 aaPredicted RBP20.54■□□□□ 0.88
LMO4-202ENST00000370544 HIC1Q14526 733 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 IPMKQ8NFU5 416 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 HIST1H2AHQ96KK5 128 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 HIST1H2AJQ99878 128 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 H2AFJQ9BTM1 129 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 MTMR12Q9C0I1 747 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 MTIF3Q9H2K0 278 aaKnown RBP20.54■□□□□ 0.88
LMO4-202ENST00000370544 SEMA6BQ9H3T3 888 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 RIOX1Q9H6W3 641 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 PCDHB7Q9Y5E2 793 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 SLC30A1Q9Y6M5 507 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 SALL1Q9NSC2 1324 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 SYCE1LA8MT33 242 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 CYP2C8P10632 490 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms