RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 FAM71BQ8TC56 605 aa16.1■□□□□ 0.17
LMO4-201ENST00000370542 PANX2Q96RD6 677 aa16.1■□□□□ 0.17
LMO4-201ENST00000370542 PARD6BQ9BYG5 372 aa16.1■□□□□ 0.17
LMO4-201ENST00000370542 PIDD1Q9HB75 910 aa16.1■□□□□ 0.17
LMO4-201ENST00000370542 SLC38A7Q9NVC3 462 aa16.1■□□□□ 0.17
LMO4-201ENST00000370542 MYO1AQ9UBC5 1043 aa16.1■□□□□ 0.17
LMO4-201ENST00000370542 ADAM21Q9UKJ8 722 aa16.1■□□□□ 0.17
LMO4-201ENST00000370542 HPSEQ9Y251 543 aa16.1■□□□□ 0.17
LMO4-201ENST00000370542 CITO14578 2027 aa16.1■□□□□ 0.17
LMO4-201ENST00000370542 TRAPPC3O43617 180 aa16.09■□□□□ 0.17
LMO4-201ENST00000370542 TOM1L1O75674 476 aa16.09■□□□□ 0.17
LMO4-201ENST00000370542 CCDC175P0C221 793 aa16.09■□□□□ 0.17
LMO4-201ENST00000370542 MAPTP10636 758 aaKnown RBP16.09■□□□□ 0.17
LMO4-201ENST00000370542 PLS3P13797 630 aa16.09■□□□□ 0.17
LMO4-201ENST00000370542 PFKFB1P16118 471 aa16.09■□□□□ 0.17
LMO4-201ENST00000370542 RPL9P32969 192 aaKnown RBP16.09■□□□□ 0.17
LMO4-201ENST00000370542 OR1D2P34982 312 aa16.09■□□□□ 0.17
LMO4-201ENST00000370542 YARSP54577 528 aaKnown RBP16.09■□□□□ 0.17
LMO4-201ENST00000370542 ARSHQ5FYA8 562 aa16.09■□□□□ 0.17
LMO4-201ENST00000370542 SLC8B1Q6J4K2 584 aa16.09■□□□□ 0.17
LMO4-201ENST00000370542 ZPBP2Q6X784 338 aa16.09■□□□□ 0.17
LMO4-201ENST00000370542 ANKS3Q6ZW76 656 aa16.09■□□□□ 0.17
LMO4-201ENST00000370542 AK8Q96MA6 479 aa16.09■□□□□ 0.17
LMO4-201ENST00000370542 ACAP3Q96P50 834 aa16.09■□□□□ 0.17
LMO4-201ENST00000370542 RTP3Q9BQQ7 232 aa16.09■□□□□ 0.17
LMO4-201ENST00000370542 GOLGA2P5Q9HBQ8 144 aa16.09■□□□□ 0.17
LMO4-201ENST00000370542 SLC2A4RGQ9NR83 387 aa16.09■□□□□ 0.17
LMO4-201ENST00000370542 RRP15Q9Y3B9 282 aaKnown RBP16.09■□□□□ 0.17
LMO4-201ENST00000370542 MAP1BP46821 2468 aaKnown RBP16.09■□□□□ 0.17
LMO4-201ENST00000370542 MYH11P35749 1972 aa16.08■□□□□ 0.16
LMO4-201ENST00000370542 KRBA1A5PL33 1030 aa16.08■□□□□ 0.16
LMO4-201ENST00000370542 SFI1A8K8P3 1242 aa16.08■□□□□ 0.16
LMO4-201ENST00000370542 SYN3O14994 580 aa16.08■□□□□ 0.16
LMO4-201ENST00000370542 SLC16A4O15374 487 aa16.08■□□□□ 0.16
LMO4-201ENST00000370542 PI15O43692 258 aa16.08■□□□□ 0.16
LMO4-201ENST00000370542 KIF5CO60282 957 aa16.08■□□□□ 0.16
LMO4-201ENST00000370542 ABLIM3O94929 683 aa16.08■□□□□ 0.16
LMO4-201ENST00000370542 FSHRP23945 695 aa16.08■□□□□ 0.16
LMO4-201ENST00000370542 TKTP29401 623 aaKnown RBP16.08■□□□□ 0.16
LMO4-201ENST00000370542 MCL1Q07820 350 aa16.08■□□□□ 0.16
LMO4-201ENST00000370542 RSPO4Q2I0M5 234 aaPredicted RBP16.08■□□□□ 0.16
LMO4-201ENST00000370542 SLC10A6Q3KNW5 377 aa16.08■□□□□ 0.16
LMO4-201ENST00000370542 PPM1LQ5SGD2 360 aa16.08■□□□□ 0.16
LMO4-201ENST00000370542 AXDND1Q5T1B0 1012 aaPredicted RBP16.08■□□□□ 0.16
LMO4-201ENST00000370542 LIN9Q5TKA1 542 aa16.08■□□□□ 0.16
LMO4-201ENST00000370542 SPECC1LQ69YQ0 1117 aa16.08■□□□□ 0.16
LMO4-201ENST00000370542 GRASPQ7Z6J2 395 aaPredicted RBP16.08■□□□□ 0.16
LMO4-201ENST00000370542 ENOX1Q8TC92 643 aaKnown RBP16.08■□□□□ 0.16
LMO4-201ENST00000370542 ZBTB45Q96K62 511 aaPredicted RBP16.08■□□□□ 0.16
LMO4-201ENST00000370542 MFSD1Q9H3U5 465 aa16.08■□□□□ 0.16
LMO4-201ENST00000370542 VIPAS39Q9H9C1 493 aa16.08■□□□□ 0.16
LMO4-201ENST00000370542 AVENQ9NQS1 362 aaPredicted RBP16.08■□□□□ 0.16
LMO4-201ENST00000370542 CDC23Q9UJX2 597 aa16.08■□□□□ 0.16
LMO4-201ENST00000370542 CDH7Q9ULB5 785 aa16.08■□□□□ 0.16
LMO4-201ENST00000370542 KCNH3Q9ULD8 1083 aa16.08■□□□□ 0.16
LMO4-201ENST00000370542 ARHGEF37A1IGU5 675 aa16.07■□□□□ 0.16
LMO4-201ENST00000370542 PLA2G4BP0C869 781 aa16.07■□□□□ 0.16
LMO4-201ENST00000370542 SCP2P22307 547 aa16.07■□□□□ 0.16
LMO4-201ENST00000370542 BRCC3P46736 316 aa16.07■□□□□ 0.16
LMO4-201ENST00000370542 LMAN1P49257 510 aa16.07■□□□□ 0.16
LMO4-201ENST00000370542 SMTNP53814 917 aa16.07■□□□□ 0.16
LMO4-201ENST00000370542 NCKAP1LP55160 1127 aa16.07■□□□□ 0.16
LMO4-201ENST00000370542 WHAMMP3Q1A5X7 153 aa16.07■□□□□ 0.16
LMO4-201ENST00000370542 PHLDB3Q6NSJ2 640 aa16.07■□□□□ 0.16
LMO4-201ENST00000370542 GET4Q7L5D6 327 aaPredicted RBP16.07■□□□□ 0.16
LMO4-201ENST00000370542 TMEM139Q8IV31 216 aa16.07■□□□□ 0.16
LMO4-201ENST00000370542 SIX5Q8N196 739 aa16.07■□□□□ 0.16
LMO4-201ENST00000370542 ZNF461Q8TAF7 563 aa16.07■□□□□ 0.16
LMO4-201ENST00000370542 LRRC15Q8TF66 581 aa16.07■□□□□ 0.16
LMO4-201ENST00000370542 COL26A1Q96A83 441 aa16.07■□□□□ 0.16
LMO4-201ENST00000370542 RSPH14Q9UHP6 348 aa16.07■□□□□ 0.16
LMO4-201ENST00000370542 CDY1Q9Y6F8 540 aa16.07■□□□□ 0.16
LMO4-201ENST00000370542 PDCD11Q14690 1871 aaKnown RBP16.07■□□□□ 0.16
LMO4-201ENST00000370542 PODXLO00592 558 aa16.06■□□□□ 0.16
LMO4-201ENST00000370542 XYLBO75191 536 aa16.06■□□□□ 0.16
LMO4-201ENST00000370542 SASH3O75995 380 aa16.06■□□□□ 0.16
LMO4-201ENST00000370542 SEC31AO94979 1220 aaKnown RBP16.06■□□□□ 0.16
LMO4-201ENST00000370542 ADRB2P07550 413 aa16.06■□□□□ 0.16
LMO4-201ENST00000370542 ZNF131P52739 623 aa16.06■□□□□ 0.16
LMO4-201ENST00000370542 OSTNP61366 133 aa16.06■□□□□ 0.16
LMO4-201ENST00000370542 NTHL1P78549 312 aa16.06■□□□□ 0.16
LMO4-201ENST00000370542 ZBTB6Q15916 424 aa16.06■□□□□ 0.16
LMO4-201ENST00000370542 MAP9Q49MG5 647 aa16.06■□□□□ 0.16
LMO4-201ENST00000370542 RESP18Q5W5W9 173 aa16.06■□□□□ 0.16
LMO4-201ENST00000370542 DTWD2Q8NBA8 298 aa16.06■□□□□ 0.16
LMO4-201ENST00000370542 LRRN4CLQ8ND94 238 aa16.06■□□□□ 0.16
LMO4-201ENST00000370542 FLCNQ8NFG4 579 aa16.06■□□□□ 0.16
LMO4-201ENST00000370542 SLC7A14Q8TBB6 771 aa16.06■□□□□ 0.16
LMO4-201ENST00000370542 FGF13Q92913 245 aa16.06■□□□□ 0.16
LMO4-201ENST00000370542 FGF14Q92915 247 aa16.06■□□□□ 0.16
LMO4-201ENST00000370542 HAPLN2Q9GZV7 340 aa16.06■□□□□ 0.16
LMO4-201ENST00000370542 PLEKHA5Q9HAU0 1116 aa16.06■□□□□ 0.16
LMO4-201ENST00000370542 LARSQ9P2J5 1176 aaKnown RBP16.06■□□□□ 0.16
LMO4-201ENST00000370542 DNMT3BQ9UBC3 853 aaKnown RBP16.06■□□□□ 0.16
LMO4-201ENST00000370542 RALYQ9UKM9 306 aaKnown RBP16.06■□□□□ 0.16
LMO4-201ENST00000370542 FBXL21Q9UKT6 434 aa16.06■□□□□ 0.16
LMO4-201ENST00000370542 ODF2LQ9ULJ1 636 aa16.06■□□□□ 0.16
LMO4-201ENST00000370542 CLIC4Q9Y696 253 aa16.06■□□□□ 0.16
LMO4-201ENST00000370542 NUMBLQ9Y6R0 609 aa16.06■□□□□ 0.16
LMO4-201ENST00000370542 TTC26A0AVF1 554 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms