RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 KREMEN2Q8NCW0 462 aa15.91■□□□□ 0.14
COL9A1-204ENST00000370496 TAS1R2Q8TE23 839 aa15.91■□□□□ 0.14
COL9A1-204ENST00000370496 ATXN2LQ8WWM7 1075 aaKnown RBP15.91■□□□□ 0.14
COL9A1-204ENST00000370496 TAF4BQ92750 862 aa15.91■□□□□ 0.14
COL9A1-204ENST00000370496 SLC35C1Q96A29 364 aa15.91■□□□□ 0.14
COL9A1-204ENST00000370496 MSLNLQ96KJ4 702 aa15.91■□□□□ 0.14
COL9A1-204ENST00000370496 PLEKHA4Q9H4M7 779 aa15.91■□□□□ 0.14
COL9A1-204ENST00000370496 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.91■□□□□ 0.14
COL9A1-204ENST00000370496 PRRG1O14668 218 aa15.9■□□□□ 0.14
COL9A1-204ENST00000370496 TBC1D4O60343 1298 aa15.9■□□□□ 0.14
COL9A1-204ENST00000370496 N4BP1O75113 896 aaKnown RBP15.9■□□□□ 0.14
COL9A1-204ENST00000370496 C1RP00736 705 aa15.9■□□□□ 0.14
COL9A1-204ENST00000370496 OR4Q2P0C623 313 aa15.9■□□□□ 0.14
COL9A1-204ENST00000370496 NOP14P78316 857 aaKnown RBP15.9■□□□□ 0.14
COL9A1-204ENST00000370496 TSPY1Q01534 308 aa15.9■□□□□ 0.14
COL9A1-204ENST00000370496 TYRO3Q06418 890 aa15.9■□□□□ 0.14
COL9A1-204ENST00000370496 SMAD4Q13485 552 aaKnown RBP15.9■□□□□ 0.14
COL9A1-204ENST00000370496 SOWAHAQ2M3V2 549 aa15.9■□□□□ 0.14
COL9A1-204ENST00000370496 SGSM1Q2NKQ1 1148 aa15.9■□□□□ 0.14
COL9A1-204ENST00000370496 SKOR2Q2VWA4 1001 aaPredicted RBP15.9■□□□□ 0.14
COL9A1-204ENST00000370496 RARS2Q5T160 578 aaKnown RBP15.9■□□□□ 0.14
COL9A1-204ENST00000370496 FAM114A1Q8IWE2 563 aa15.9■□□□□ 0.14
COL9A1-204ENST00000370496 SMRP1Q8NCR6 262 aa15.9■□□□□ 0.14
COL9A1-204ENST00000370496 FBXL13Q8NEE6 735 aa15.9■□□□□ 0.14
COL9A1-204ENST00000370496 OR10T2Q8NGX3 314 aa15.9■□□□□ 0.14
COL9A1-204ENST00000370496 SPATA18Q8TC71 538 aa15.9■□□□□ 0.14
COL9A1-204ENST00000370496 MED15Q96RN5 788 aa15.9■□□□□ 0.14
COL9A1-204ENST00000370496 THAP9Q9H5L6 903 aa15.9■□□□□ 0.14
COL9A1-204ENST00000370496 VRTNQ9H8Y1 702 aa15.9■□□□□ 0.14
COL9A1-204ENST00000370496 DDX43Q9NXZ2 648 aaKnown RBP15.9■□□□□ 0.14
COL9A1-204ENST00000370496 MAGEC2Q9UBF1 373 aaPredicted RBP15.9■□□□□ 0.14
COL9A1-204ENST00000370496 POLIQ9UNA4 740 aa15.9■□□□□ 0.14
COL9A1-204ENST00000370496 FAM50BQ9Y247 325 aa15.9■□□□□ 0.14
COL9A1-204ENST00000370496 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.9■□□□□ 0.14
COL9A1-204ENST00000370496 UNC80Q8N2C7 3258 aa15.9■□□□□ 0.14
COL9A1-204ENST00000370496 ASS1P00966 412 aaKnown RBP15.89■□□□□ 0.13
COL9A1-204ENST00000370496 C8AP07357 584 aa15.89■□□□□ 0.13
COL9A1-204ENST00000370496 PCSK1P29120 753 aa15.89■□□□□ 0.13
COL9A1-204ENST00000370496 ELF1P32519 619 aa15.89■□□□□ 0.13
COL9A1-204ENST00000370496 LHX1P48742 406 aa15.89■□□□□ 0.13
COL9A1-204ENST00000370496 KCNQ1P51787 676 aa15.89■□□□□ 0.13
COL9A1-204ENST00000370496 MARSP56192 900 aaKnown RBP15.89■□□□□ 0.13
COL9A1-204ENST00000370496 PUS10Q3MIT2 529 aaKnown RBP15.89■□□□□ 0.13
COL9A1-204ENST00000370496 CBWD6Q4V339 395 aa15.89■□□□□ 0.13
COL9A1-204ENST00000370496 CBWD3Q5JTY5 395 aa15.89■□□□□ 0.13
COL9A1-204ENST00000370496 CBWD5Q5RIA9 395 aa15.89■□□□□ 0.13
COL9A1-204ENST00000370496 TPGS2Q68CL5 300 aa15.89■□□□□ 0.13
COL9A1-204ENST00000370496 PTCRAQ6ISU1 281 aaPredicted RBP15.89■□□□□ 0.13
COL9A1-204ENST00000370496 CES5AQ6NT32 575 aa15.89■□□□□ 0.13
COL9A1-204ENST00000370496 SYCE2Q6PIF2 218 aa15.89■□□□□ 0.13
COL9A1-204ENST00000370496 C11orf57Q6ZUT1 292 aaPredicted RBP15.89■□□□□ 0.13
COL9A1-204ENST00000370496 DPH6Q7L8W6 267 aa15.89■□□□□ 0.13
COL9A1-204ENST00000370496 C12orf76Q8N812 135 aaPredicted RBP15.89■□□□□ 0.13
COL9A1-204ENST00000370496 ZNF461Q8TAF7 563 aa15.89■□□□□ 0.13
COL9A1-204ENST00000370496 SLC7A14Q8TBB6 771 aa15.89■□□□□ 0.13
COL9A1-204ENST00000370496 HDAC7Q8WUI4 952 aa15.89■□□□□ 0.13
COL9A1-204ENST00000370496 ELMO3Q96BJ8 720 aa15.89■□□□□ 0.13
COL9A1-204ENST00000370496 PGLYRP2Q96PD5 576 aa15.89■□□□□ 0.13
COL9A1-204ENST00000370496 PI4K2AQ9BTU6 479 aa15.89■□□□□ 0.13
COL9A1-204ENST00000370496 DNAJC25Q9H1X3 360 aa15.89■□□□□ 0.13
COL9A1-204ENST00000370496 SNX25Q9H3E2 840 aa15.89■□□□□ 0.13
COL9A1-204ENST00000370496 SMYD3Q9H7B4 428 aa15.89■□□□□ 0.13
COL9A1-204ENST00000370496 C2orf16Q68DN1 1984 aa15.89■□□□□ 0.13
COL9A1-204ENST00000370496 LETM1O95202 739 aaPredicted RBP15.88■□□□□ 0.13
COL9A1-204ENST00000370496 WARSP23381 471 aaKnown RBP15.88■□□□□ 0.13
COL9A1-204ENST00000370496 ACAT1P24752 427 aaKnown RBP15.88■□□□□ 0.13
COL9A1-204ENST00000370496 MTIF2P46199 727 aaKnown RBP15.88■□□□□ 0.13
COL9A1-204ENST00000370496 FMO5P49326 533 aa15.88■□□□□ 0.13
COL9A1-204ENST00000370496 ITIH3Q06033 890 aa15.88■□□□□ 0.13
COL9A1-204ENST00000370496 ADCY1Q08828 1119 aa15.88■□□□□ 0.13
COL9A1-204ENST00000370496 CETN1Q12798 172 aa15.88■□□□□ 0.13
COL9A1-204ENST00000370496 SLC39A12Q504Y0 691 aa15.88■□□□□ 0.13
COL9A1-204ENST00000370496 PPM1LQ5SGD2 360 aa15.88■□□□□ 0.13
COL9A1-204ENST00000370496 SPOPLQ6IQ16 392 aa15.88■□□□□ 0.13
COL9A1-204ENST00000370496 LILRA6Q6PI73 481 aa15.88■□□□□ 0.13
COL9A1-204ENST00000370496 TMC5Q6UXY8 1006 aa15.88■□□□□ 0.13
COL9A1-204ENST00000370496 CCDC149Q6ZUS6 474 aa15.88■□□□□ 0.13
COL9A1-204ENST00000370496 OSTM1Q86WC4 334 aa15.88■□□□□ 0.13
COL9A1-204ENST00000370496 TRIM59Q8IWR1 403 aa15.88■□□□□ 0.13
COL9A1-204ENST00000370496 KBTBD7Q8WVZ9 684 aa15.88■□□□□ 0.13
COL9A1-204ENST00000370496 TMEM209Q96SK2 561 aa15.88■□□□□ 0.13
COL9A1-204ENST00000370496 RTP3Q9BQQ7 232 aa15.88■□□□□ 0.13
COL9A1-204ENST00000370496 NIF3L1Q9GZT8 377 aa15.88■□□□□ 0.13
COL9A1-204ENST00000370496 NAT10Q9H0A0 1025 aaKnown RBP15.88■□□□□ 0.13
COL9A1-204ENST00000370496 ZCWPW1Q9H0M4 648 aa15.88■□□□□ 0.13
COL9A1-204ENST00000370496 CYP4F11Q9HBI6 524 aa15.88■□□□□ 0.13
COL9A1-204ENST00000370496 ZDHHC7Q9NXF8 308 aa15.88■□□□□ 0.13
COL9A1-204ENST00000370496 AFF4Q9UHB7 1163 aaKnown RBP15.88■□□□□ 0.13
COL9A1-204ENST00000370496 USP15Q9Y4E8 981 aaPredicted RBP15.88■□□□□ 0.13
COL9A1-204ENST00000370496 DENND4AQ7Z401 1863 aa15.88■□□□□ 0.13
COL9A1-204ENST00000370496 SYCE3A1L190 88 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 MBTPS2O43462 519 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 TACC1O75410 805 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 RFPL2O75678 378 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 ABLIM3O94929 683 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 AFPP02771 609 aaKnown RBP15.87■□□□□ 0.13
COL9A1-204ENST00000370496 ATF2P15336 505 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 RAP1GAPP47736 663 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 MCCD1P59942 119 aaPredicted RBP15.87■□□□□ 0.13
COL9A1-204ENST00000370496 GPR17Q13304 367 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms