RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 NUP205Q92621 2012 aa16.75■□□□□ 0.27
SSR4-204ENST00000370087 TCHHQ07283 1943 aa16.75■□□□□ 0.27
SSR4-204ENST00000370087 OR6C75A6NL08 312 aa16.75■□□□□ 0.27
SSR4-204ENST00000370087 DPYSL4O14531 572 aa16.75■□□□□ 0.27
SSR4-204ENST00000370087 CCDC192P0DO97 292 aa16.75■□□□□ 0.27
SSR4-204ENST00000370087 ATF6P18850 670 aa16.75■□□□□ 0.27
SSR4-204ENST00000370087 TNFSF9P41273 254 aa16.75■□□□□ 0.27
SSR4-204ENST00000370087 COL9A2Q14055 689 aaPredicted RBP16.75■□□□□ 0.27
SSR4-204ENST00000370087 ZBTB6Q15916 424 aa16.75■□□□□ 0.27
SSR4-204ENST00000370087 ITPRIPL2Q3MIP1 535 aa16.75■□□□□ 0.27
SSR4-204ENST00000370087 TMEM196Q5HYL7 178 aa16.75■□□□□ 0.27
SSR4-204ENST00000370087 TTC38Q5R3I4 469 aa16.75■□□□□ 0.27
SSR4-204ENST00000370087 ERICH6BQ5W0A0 696 aa16.75■□□□□ 0.27
SSR4-204ENST00000370087 TRIM68Q6AZZ1 485 aa16.75■□□□□ 0.27
SSR4-204ENST00000370087 OR10T2Q8NGX3 314 aa16.75■□□□□ 0.27
SSR4-204ENST00000370087 SNX29Q8TEQ0 813 aa16.75■□□□□ 0.27
SSR4-204ENST00000370087 HHIPQ96QV1 700 aa16.75■□□□□ 0.27
SSR4-204ENST00000370087 LRWD1Q9UFC0 647 aa16.75■□□□□ 0.27
SSR4-204ENST00000370087 SCN1AP35498 2009 aa16.75■□□□□ 0.27
SSR4-204ENST00000370087 TTC26A0AVF1 554 aa16.74■□□□□ 0.27
SSR4-204ENST00000370087 DCLK1O15075 740 aa16.74■□□□□ 0.27
SSR4-204ENST00000370087 TOM1L1O75674 476 aa16.74■□□□□ 0.27
SSR4-204ENST00000370087 EGFP01133 1207 aa16.74■□□□□ 0.27
SSR4-204ENST00000370087 SPINK2P20155 84 aa16.74■□□□□ 0.27
SSR4-204ENST00000370087 U2AF2P26368 475 aaKnown RBP eCLIP16.74■□□□□ 0.275e-15■■■□□ 14.8
SSR4-204ENST00000370087 MCM2P49736 904 aa16.74■□□□□ 0.27
SSR4-204ENST00000370087 RAD51AP2Q09MP3 1159 aa16.74■□□□□ 0.27
SSR4-204ENST00000370087 ANKRD1Q15327 319 aa16.74■□□□□ 0.27
SSR4-204ENST00000370087 OVOS1Q6IE37 1185 aa16.74■□□□□ 0.27
SSR4-204ENST00000370087 RINT1Q6NUQ1 792 aa16.74■□□□□ 0.27
SSR4-204ENST00000370087 C1orf186Q6ZWK4 172 aa16.74■□□□□ 0.27
SSR4-204ENST00000370087 HAUS6Q7Z4H7 955 aa16.74■□□□□ 0.27
SSR4-204ENST00000370087 TMEM161BQ8NDZ6 487 aa16.74■□□□□ 0.27
SSR4-204ENST00000370087 KIF12Q96FN5 646 aa16.74■□□□□ 0.27
SSR4-204ENST00000370087 SLC46A2Q9BY10 475 aa16.74■□□□□ 0.27
SSR4-204ENST00000370087 TASP1Q9H6P5 420 aa16.74■□□□□ 0.27
SSR4-204ENST00000370087 FBRSL1Q9HCM7 1045 aaKnown RBP16.74■□□□□ 0.27
SSR4-204ENST00000370087 WASF3Q9UPY6 502 aa16.74■□□□□ 0.27
SSR4-204ENST00000370087 CCL26Q9Y258 94 aa16.74■□□□□ 0.27
SSR4-204ENST00000370087 IGF2RP11717 2491 aa16.73■□□□□ 0.27
SSR4-204ENST00000370087 CCDC163A0A0D9SF12 145 aa16.73■□□□□ 0.27
SSR4-204ENST00000370087 RNF40O75150 1001 aa16.73■□□□□ 0.27
SSR4-204ENST00000370087 TOP3BO95985 862 aaKnown RBP16.73■□□□□ 0.27
SSR4-204ENST00000370087 MAPTP10636 758 aaKnown RBP16.73■□□□□ 0.27
SSR4-204ENST00000370087 WEE1P30291 646 aa16.73■□□□□ 0.27
SSR4-204ENST00000370087 CDC25AP30304 524 aa16.73■□□□□ 0.27
SSR4-204ENST00000370087 MCL1Q07820 350 aa16.73■□□□□ 0.27
SSR4-204ENST00000370087 ORC2Q13416 577 aaPredicted RBP16.73■□□□□ 0.27
SSR4-204ENST00000370087 MYBPC2Q14324 1141 aa16.73■□□□□ 0.27
SSR4-204ENST00000370087 IL17AQ16552 155 aa16.73■□□□□ 0.27
SSR4-204ENST00000370087 PLK5Q496M5 336 aa16.73■□□□□ 0.27
SSR4-204ENST00000370087 ARHGAP15Q53QZ3 475 aa16.73■□□□□ 0.27
SSR4-204ENST00000370087 RNF43Q68DV7 783 aa16.73■□□□□ 0.27
SSR4-204ENST00000370087 UNQ6494/PRO21346Q6UXR6 183 aa16.73■□□□□ 0.27
SSR4-204ENST00000370087 DSTYKQ6XUX3 929 aa16.73■□□□□ 0.27
SSR4-204ENST00000370087 USP37Q86T82 979 aa16.73■□□□□ 0.27
SSR4-204ENST00000370087 IGSF22Q8N9C0 903 aa16.73■□□□□ 0.27
SSR4-204ENST00000370087 ZC3H10Q96K80 434 aaKnown RBP16.73■□□□□ 0.27
SSR4-204ENST00000370087 DRC1Q96MC2 740 aa16.73■□□□□ 0.27
SSR4-204ENST00000370087 SEPT5Q99719 369 aaPredicted RBP16.73■□□□□ 0.27
SSR4-204ENST00000370087 FAM83CQ9BQN1 747 aa16.73■□□□□ 0.27
SSR4-204ENST00000370087 MMTAG2Q9BU76 263 aaKnown RBP16.73■□□□□ 0.27
SSR4-204ENST00000370087 TMEM121BQ9BXQ6 578 aaPredicted RBP16.73■□□□□ 0.27
SSR4-204ENST00000370087 DUSP15Q9H1R2 295 aaPredicted RBP16.73■□□□□ 0.27
SSR4-204ENST00000370087 EBF3Q9H4W6 596 aa16.73■□□□□ 0.27
SSR4-204ENST00000370087 GKN1Q9NS71 199 aa16.73■□□□□ 0.27
SSR4-204ENST00000370087 ZMIZ1Q9ULJ6 1067 aa16.73■□□□□ 0.27
SSR4-204ENST00000370087 SLC8A2Q9UPR5 921 aa16.73■□□□□ 0.27
SSR4-204ENST00000370087 RBM19Q9Y4C8 960 aaKnown RBP16.73■□□□□ 0.27
SSR4-204ENST00000370087 ASB3Q9Y575 518 aa16.73■□□□□ 0.27
SSR4-204ENST00000370087 PCDHGA5Q9Y5G8 931 aa16.73■□□□□ 0.27
SSR4-204ENST00000370087 LACTBL1A8MY62 500 aa16.72■□□□□ 0.27
SSR4-204ENST00000370087 FAM189A1O60320 539 aa16.72■□□□□ 0.27
SSR4-204ENST00000370087 ARSAP15289 507 aa16.72■□□□□ 0.27
SSR4-204ENST00000370087 PLCB2Q00722 1185 aa16.72■□□□□ 0.27
SSR4-204ENST00000370087 TMEM150AQ86TG1 271 aa16.72■□□□□ 0.27
SSR4-204ENST00000370087 STKLD1Q8NE28 680 aa16.72■□□□□ 0.27
SSR4-204ENST00000370087 EZH1Q92800 747 aaPredicted RBP16.72■□□□□ 0.27
SSR4-204ENST00000370087 EDEM2Q9BV94 578 aa16.72■□□□□ 0.27
SSR4-204ENST00000370087 OXCT2Q9BYC2 517 aaPredicted RBP16.72■□□□□ 0.27
SSR4-204ENST00000370087 VPS45Q9NRW7 570 aa16.72■□□□□ 0.27
SSR4-204ENST00000370087 PTPRDP23468 1912 aa16.71■□□□□ 0.27
SSR4-204ENST00000370087 AKAP3O75969 853 aa16.71■□□□□ 0.27
SSR4-204ENST00000370087 TYMPP19971 482 aa16.71■□□□□ 0.27
SSR4-204ENST00000370087 NMT1P30419 496 aaKnown RBP16.71■□□□□ 0.27
SSR4-204ENST00000370087 NOVA1P51513 510 aaKnown RBP16.71■□□□□ 0.27
SSR4-204ENST00000370087 FOXC1Q12948 553 aa16.71■□□□□ 0.27
SSR4-204ENST00000370087 STRN3Q13033 797 aa16.71■□□□□ 0.27
SSR4-204ENST00000370087 RUNX3Q13761 415 aa16.71■□□□□ 0.27
SSR4-204ENST00000370087 SAFBQ15424 915 aaKnown RBP eCLIP16.71■□□□□ 0.27
SSR4-204ENST00000370087 ENOX2Q16206 610 aaKnown RBP16.71■□□□□ 0.27
SSR4-204ENST00000370087 SLC39A12Q504Y0 691 aa16.71■□□□□ 0.27
SSR4-204ENST00000370087 ZPBP2Q6X784 338 aa16.71■□□□□ 0.27
SSR4-204ENST00000370087 GIPC2Q8TF65 315 aa16.71■□□□□ 0.27
SSR4-204ENST00000370087 SENP8Q96LD8 212 aa16.71■□□□□ 0.27
SSR4-204ENST00000370087 NTPCRQ9BSD7 190 aaKnown RBP16.71■□□□□ 0.27
SSR4-204ENST00000370087 PLEKHA5Q9HAU0 1116 aa16.71■□□□□ 0.27
SSR4-204ENST00000370087 SH2B1Q9NRF2 756 aaPredicted RBP16.71■□□□□ 0.27
SSR4-204ENST00000370087 UBQLN1Q9UMX0 589 aaKnown RBP16.71■□□□□ 0.27
SSR4-204ENST00000370087 DNM3Q9UQ16 869 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms