RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 NOCTQ9UK39 431 aaKnown RBP10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 AGAP1Q9UPQ3 857 aa10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 MAP3K13O43283 966 aa10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 CEP104O60308 925 aa10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 PECAM1P16284 738 aaPredicted RBP10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 TNFSF9P41273 254 aa10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 SLC8A3P57103 927 aa10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 CDR2Q01850 454 aa10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 ZNF844Q08AG5 666 aa10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 IRF5Q13568 498 aa10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 MTHFD1LQ6UB35 978 aa10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 PEX26Q7Z412 305 aa10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 DAAM2Q86T65 1068 aa10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 RHOT2Q8IXI1 618 aa10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 THNSL1Q8IYQ7 743 aa10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 TAS2R14Q9NYV8 317 aa10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 TNFSF13BQ9Y275 285 aa10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 PTPRJQ12913 1337 aa10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 CCT8L1PA6NM43 557 aa10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 DYNC1LI2O43237 492 aaPredicted RBP10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 VNN1O95497 513 aa10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 HOXD8P13378 290 aaPredicted RBP10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 TBXAS1P24557 533 aaPredicted RBP10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 GPC5P78333 572 aa10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 ITIH3Q06033 890 aa10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 GRIK4Q16099 956 aa10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 DUOXA2Q1HG44 320 aa10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 SAPCD2Q86UD0 394 aa10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 LRRC57Q8N9N7 239 aa10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 OR5B17Q8NGF7 314 aa10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 DHX38Q92620 1227 aaKnown RBP10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 THAP2Q9H0W7 228 aa10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.6□□□□□ -0.712e-6■■■■■ 29.3
PRPF38B-203ENST00000370025 CPSF3Q9UKF6 684 aaKnown RBP10.6□□□□□ -0.71
PRPF38B-203ENST00000370025 ZNF236Q9UL36 1845 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 ATXN2Q99700 1313 aaKnown RBP10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 A0A087WZ62 844 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 DAPK3O43293 454 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 CHRNB2P17787 502 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 PROZP22891 400 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 RPS6KA3P51812 740 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 SESN3P58005 492 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 DHX9Q08211 1270 aaKnown RBP10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 NCOA4Q13772 614 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 ZNF572Q7Z3I7 529 aaPredicted RBP10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 PALB2Q86YC2 1186 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 IFNL1Q8IU54 200 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 ELMO3Q96BJ8 720 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 FDXACB1Q9BRP7 624 aaPredicted RBP10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 NEUROG2Q9H2A3 272 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 ZFYVE28Q9HCC9 887 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 PTPRHQ9HD43 1115 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 PAPOLBQ9NRJ5 636 aaKnown RBP10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 RRN3P2A6NIE6 340 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 ABLIM1O14639 778 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 B4GALT5O43286 388 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 FAM189A1O60320 539 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 MMEP08473 750 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 FAM187BQ17R55 369 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 IFNLR1Q8IU57 520 aaPredicted RBP10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 LRRC34Q8IZ02 419 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 LINC01465Q8N7H1 131 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 DYDC1Q8WWB3 177 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 KLHL29Q96CT2 875 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 PBKQ96KB5 322 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 CELF4Q9BZC1 486 aaKnown RBP10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 RPF1Q9H9Y2 349 aaKnown RBP10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 IFT122Q9HBG6 1241 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 AMFRQ9UKV5 643 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 PCDHB2Q9Y5E7 798 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 DOCK3Q8IZD9 2030 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 SMNDC1O75940 238 aaKnown RBP eCLIP10.59□□□□□ -0.713e-7■■□□□ 13.7
PRPF38B-203ENST00000370025 UBOX5O94941 541 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 HOXC6P09630 235 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 NOP14P78316 857 aaKnown RBP10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 FMO1Q01740 532 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 TRPC3Q13507 836 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 CUL2Q13617 745 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 UAP1Q16222 522 aaPredicted RBP10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 PRAMEF19Q5SWL8 479 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 SPOPLQ6IQ16 392 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 C17orf99Q6UX52 265 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 SLFN11Q7Z7L1 901 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 CCDC25Q86WR0 208 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 ZNF677Q86XU0 584 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 NLRP7Q8WX94 980 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 CHMP6Q96FZ7 201 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 PCDHB18PQ96TA0 734 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 MINDY3Q9H8M7 445 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 SAMD15Q9P1V8 674 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 CTTNBP2NLQ9P2B4 639 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 AMACRQ9UHK6 382 aa10.59□□□□□ -0.71
PRPF38B-203ENST00000370025 DPPA5A6NC42 116 aa10.58□□□□□ -0.72
PRPF38B-203ENST00000370025 CES2O00748 559 aa10.58□□□□□ -0.72
PRPF38B-203ENST00000370025 TNNC2P02585 160 aa10.58□□□□□ -0.72
PRPF38B-203ENST00000370025 VTNP04004 478 aa10.58□□□□□ -0.72
PRPF38B-203ENST00000370025 LINGO3P0C6S8 592 aa10.58□□□□□ -0.72
PRPF38B-203ENST00000370025 TMEM191BP0C7N4 346 aa10.58□□□□□ -0.72
PRPF38B-203ENST00000370025 NEFHP12036 1026 aa10.58□□□□□ -0.72
PRPF38B-203ENST00000370025 CHN1P15882 459 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms