RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 CNTNAP1P78357 1384 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 RPTORQ8N122 1335 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 PFDN6O15212 129 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 AGTP01019 485 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 LGALS2P05162 132 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 RRM1P23921 792 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 SSTR3P32745 418 aaPredicted RBP5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 INHBEP58166 350 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 EIF3EP60228 445 aaKnown RBP5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 ATP11AP98196 1134 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 EFHC1Q5JVL4 640 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 AGBL2Q5U5Z8 902 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 KIAA1841Q6NSI8 718 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 LRRC31Q6UY01 552 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 C4orf22Q6V702 233 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 IRF2BP2Q7Z5L9 587 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 NT5DC3Q86UY8 548 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 CREG2Q8IUH2 290 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 VPS52Q8N1B4 723 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 TTC16Q8NEE8 873 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 EXD1Q8NHP7 514 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 ASAP3Q8TDY4 903 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 EPS8L1Q8TE68 723 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 CAVIN3Q969G5 261 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 CYFIP2Q96F07 1278 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 ROPN1BQ9BZX4 212 aaPredicted RBP5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 DHX35Q9H5Z1 703 aaKnown RBP5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 ROPN1Q9HAT0 212 aaPredicted RBP5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 CHD4Q14839 1912 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 SLC15A5A6NIM6 579 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 HGSO14964 777 aaPredicted RBP5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 FARP2O94887 1054 aaPredicted RBP5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 ALDH1A1P00352 501 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 ADRB2P07550 413 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 PAEPP09466 180 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 SETSIPP0DME0 302 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 CA4P22748 312 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 GNL1P36915 607 aaPredicted RBP5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 PTENP60484 403 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 TMEM62Q0P6H9 643 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 RRP1BQ14684 758 aaKnown RBP5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 ZACNQ401N2 412 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 SH3D19Q5HYK7 790 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 PHLDB3Q6NSJ2 640 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 CDR2LQ86X02 465 aaPredicted RBP5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 RAET1EQ8TD07 263 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 ZNF606Q8WXB4 792 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 PURBQ96QR8 312 aaKnown RBP5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 NIFKQ9BYG3 293 aaKnown RBP5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 FGFBP2Q9BYJ0 223 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 FRMD8Q9BZ67 464 aaPredicted RBP5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 TBK1Q9UHD2 729 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 ZNF214Q9UL59 606 aaPredicted RBP5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 TNFSF13BQ9Y275 285 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 NCANO14594 1321 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 TYW5A2RUC4 315 aaKnown RBP5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 PHF20L1A8MW92 1017 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 TISP43B9A030 160 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 PI4K2BG5E9Z4 385 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 RNF225M0QZC1 329 aaPredicted RBP5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 CHUKO15111 745 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 KRT38O76015 456 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 VTNP04004 478 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 RPSAP08865 295 aaKnown RBP5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 CXCL8P10145 99 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 SLC8A1P32418 973 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 DLG4P78352 724 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 PTPN11Q06124 597 aaPredicted RBP5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 DGKZQ13574 1117 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 ACVR2BQ13705 512 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 SPARCL1Q14515 664 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 HIF1AQ16665 826 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 TREML2Q5T2D2 321 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 TAF2Q6P1X5 1199 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 NOP9Q86U38 636 aaKnown RBP5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 N4BP2L2Q92802 583 aaPredicted RBP5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 DNAJC17Q9NVM6 304 aaKnown RBP5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 EHD2Q9NZN4 543 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 DMGDHQ9UI17 866 aaKnown RBP5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 TTC7AQ9ULT0 858 aaPredicted RBP5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 REXO2Q9Y3B8 237 aaKnown RBP5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 NRAPQ86VF7 1730 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 MAST2Q6P0Q8 1798 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 RASA4BC9J798 803 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 PPP1R12AO14974 1030 aaPredicted RBP5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 GPR182O15218 404 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 RASA4O43374 803 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 CDH16O75309 829 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 RALAP11233 206 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 EIF4BP23588 611 aaKnown RBP5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 SERPINB6P35237 376 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 ITKQ08881 620 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 PDIA2Q13087 525 aaKnown RBP5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 CAPSQ13938 189 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 KIZQ2M2Z5 673 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 ITPRIPL1Q6GPH6 555 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 SLC27A1Q6PCB7 646 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 FOXR1Q6PIV2 292 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 MICAL1Q8TDZ2 1067 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 CASKIN2Q8WXE0 1202 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms