RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 CLLU1OSQ5K130 101 aa25.45■■□□□ 1.66
SNX3-203ENST00000368979 ACAD10Q6JQN1 1059 aa25.45■■□□□ 1.66
SNX3-203ENST00000368979 NECAB2Q7Z6G3 386 aa25.45■■□□□ 1.66
SNX3-203ENST00000368979 TFAP2BQ92481 460 aa25.45■■□□□ 1.66
SNX3-203ENST00000368979 CACNG4Q9UBN1 327 aa25.45■■□□□ 1.66
SNX3-203ENST00000368979 PCDHGC3Q9UN70 934 aa25.45■■□□□ 1.66
SNX3-203ENST00000368979 INPP5FQ9Y2H2 1132 aa25.45■■□□□ 1.66
SNX3-203ENST00000368979 TACC1O75410 805 aa25.44■■□□□ 1.66
SNX3-203ENST00000368979 MOCS3O95396 460 aa25.44■■□□□ 1.66
SNX3-203ENST00000368979 CASQ1P31415 396 aa25.44■■□□□ 1.66
SNX3-203ENST00000368979 NOMO3P69849 1222 aa25.44■■□□□ 1.66
SNX3-203ENST00000368979 CENPCQ03188 943 aa25.44■■□□□ 1.66
SNX3-203ENST00000368979 GLB1LQ6UWU2 654 aa25.44■■□□□ 1.66
SNX3-203ENST00000368979 CTNNBL1Q8WYA6 563 aaPredicted RBP25.44■■□□□ 1.66
SNX3-203ENST00000368979 THAP2Q9H0W7 228 aa25.44■■□□□ 1.66
SNX3-203ENST00000368979 TMEM39AQ9NV64 488 aa25.44■■□□□ 1.66
SNX3-203ENST00000368979 ABCB4P21439 1286 aa25.43■■□□□ 1.66
SNX3-203ENST00000368979 ORC1Q13415 861 aa25.43■■□□□ 1.66
SNX3-203ENST00000368979 TUSC3Q13454 348 aa25.43■■□□□ 1.66
SNX3-203ENST00000368979 UPP1Q16831 310 aa25.43■■□□□ 1.66
SNX3-203ENST00000368979 TRIM58Q8NG06 486 aa25.43■■□□□ 1.66
SNX3-203ENST00000368979 KBTBD7Q8WVZ9 684 aa25.43■■□□□ 1.66
SNX3-203ENST00000368979 CYFIP2Q96F07 1278 aa25.43■■□□□ 1.66
SNX3-203ENST00000368979 NOX5Q96PH1 765 aa25.43■■□□□ 1.66
SNX3-203ENST00000368979 NT5C1AQ9BXI3 368 aa25.43■■□□□ 1.66
SNX3-203ENST00000368979 PDCL3Q9H2J4 239 aa25.43■■□□□ 1.66
SNX3-203ENST00000368979 NME7Q9Y5B8 376 aa25.43■■□□□ 1.66
SNX3-203ENST00000368979 CASTOR2A6NHX0 329 aa25.42■■□□□ 1.66
SNX3-203ENST00000368979 BUB1O43683 1085 aa25.42■■□□□ 1.66
SNX3-203ENST00000368979 DPH6Q7L8W6 267 aa25.42■■□□□ 1.66
SNX3-203ENST00000368979 UNC93AQ86WB7 457 aa25.42■■□□□ 1.66
SNX3-203ENST00000368979 TOP6BLQ8N6T0 577 aa25.42■■□□□ 1.66
SNX3-203ENST00000368979 C3orf58Q8NDZ4 430 aa25.42■■□□□ 1.66
SNX3-203ENST00000368979 RFFLQ8WZ73 363 aa25.42■■□□□ 1.66
SNX3-203ENST00000368979 ARHGEF26Q96DR7 871 aa25.42■■□□□ 1.66
SNX3-203ENST00000368979 DDX27Q96GQ7 796 aaKnown RBP25.42■■□□□ 1.66
SNX3-203ENST00000368979 UROC1Q96N76 676 aa25.42■■□□□ 1.66
SNX3-203ENST00000368979 MCOLN1Q9GZU1 580 aa25.42■■□□□ 1.66
SNX3-203ENST00000368979 L1RE1Q9UN81 338 aa25.42■■□□□ 1.66
SNX3-203ENST00000368979 FAM170AA1A519 330 aa25.42■■□□□ 1.66
SNX3-203ENST00000368979 MED7O43513 233 aa25.42■■□□□ 1.66
SNX3-203ENST00000368979 FGFR1P11362 822 aa25.42■■□□□ 1.66
SNX3-203ENST00000368979 VDRP11473 427 aa25.42■■□□□ 1.66
SNX3-203ENST00000368979 CD19P15391 556 aa25.42■■□□□ 1.66
SNX3-203ENST00000368979 IGFBP6P24592 240 aaPredicted RBP25.42■■□□□ 1.66
SNX3-203ENST00000368979 AARSP49588 968 aaKnown RBP eCLIP25.42■■□□□ 1.66
SNX3-203ENST00000368979 NAA35Q5VZE5 725 aa25.42■■□□□ 1.66
SNX3-203ENST00000368979 PASD1Q8IV76 773 aa25.42■■□□□ 1.66
SNX3-203ENST00000368979 APPL2Q8NEU8 664 aa25.42■■□□□ 1.66
SNX3-203ENST00000368979 ALS2CR12Q96Q35 445 aa25.42■■□□□ 1.66
SNX3-203ENST00000368979 PAAF1Q9BRP4 392 aa25.42■■□□□ 1.66
SNX3-203ENST00000368979 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.41■■□□□ 1.66
SNX3-203ENST00000368979 HUS1O60921 280 aa25.41■■□□□ 1.66
SNX3-203ENST00000368979 LSM8O95777 96 aaKnown RBP25.41■■□□□ 1.66
SNX3-203ENST00000368979 FAM163BP0C2L3 166 aa25.41■■□□□ 1.66
SNX3-203ENST00000368979 SSTR3P32745 418 aaPredicted RBP25.41■■□□□ 1.66
SNX3-203ENST00000368979 CDH5P33151 784 aaPredicted RBP25.41■■□□□ 1.66
SNX3-203ENST00000368979 RFC2P35250 354 aa25.41■■□□□ 1.66
SNX3-203ENST00000368979 GPC5P78333 572 aa25.41■■□□□ 1.66
SNX3-203ENST00000368979 TCEAL1Q15170 157 aa25.41■■□□□ 1.66
SNX3-203ENST00000368979 NOMO2Q5JPE7 1267 aa25.41■■□□□ 1.66
SNX3-203ENST00000368979 PPP1R2P3Q6NXS1 205 aa25.41■■□□□ 1.66
SNX3-203ENST00000368979 KIAA1257Q9ULG3 409 aa25.41■■□□□ 1.66
SNX3-203ENST00000368979 PCDHGC5Q9Y5F6 944 aa25.41■■□□□ 1.66
SNX3-203ENST00000368979 TET1Q8NFU7 2136 aa25.4■■□□□ 1.66
SNX3-203ENST00000368979 WARSP23381 471 aaKnown RBP25.4■■□□□ 1.66
SNX3-203ENST00000368979 NSFP46459 744 aaKnown RBP25.4■■□□□ 1.66
SNX3-203ENST00000368979 DEFB128Q7Z7B8 93 aa25.4■■□□□ 1.66
SNX3-203ENST00000368979 CRIPAKQ8N1N5 446 aa25.4■■□□□ 1.66
SNX3-203ENST00000368979 URGCPQ8TCY9 931 aa25.4■■□□□ 1.66
SNX3-203ENST00000368979 CPA5Q8WXQ8 436 aa25.4■■□□□ 1.66
SNX3-203ENST00000368979 VWCEQ96DN2 955 aa25.4■■□□□ 1.66
SNX3-203ENST00000368979 NAPGQ99747 312 aaPredicted RBP25.4■■□□□ 1.66
SNX3-203ENST00000368979 GTF3C4Q9UKN8 822 aa25.4■■□□□ 1.66
SNX3-203ENST00000368979 PCDHB7Q9Y5E2 793 aa25.4■■□□□ 1.66
SNX3-203ENST00000368979 CYB561D2O14569 222 aa25.39■■□□□ 1.66
SNX3-203ENST00000368979 NAP1L1P55209 391 aaKnown RBP25.39■■□□□ 1.66
SNX3-203ENST00000368979 DSC1Q08554 894 aa25.39■■□□□ 1.66
SNX3-203ENST00000368979 IFI16Q16666 785 aaKnown RBP25.39■■□□□ 1.66
SNX3-203ENST00000368979 MON1BQ7L1V2 547 aa25.39■■□□□ 1.66
SNX3-203ENST00000368979 PHF13Q86YI8 300 aaPredicted RBP25.39■■□□□ 1.66
SNX3-203ENST00000368979 ADGRF2Q8IZF7 708 aa25.39■■□□□ 1.66
SNX3-203ENST00000368979 MCOLN2Q8IZK6 566 aa25.39■■□□□ 1.66
SNX3-203ENST00000368979 PDCL2Q8N4E4 241 aa25.39■■□□□ 1.66
SNX3-203ENST00000368979 OR6B3Q8NGW1 331 aa25.39■■□□□ 1.66
SNX3-203ENST00000368979 ZNF518BQ9C0D4 1074 aa25.39■■□□□ 1.66
SNX3-203ENST00000368979 LHX5Q9H2C1 402 aa25.39■■□□□ 1.66
SNX3-203ENST00000368979 KANSL3Q9P2N6 904 aa25.39■■□□□ 1.66
SNX3-203ENST00000368979 CTAGE9A4FU28 777 aa25.38■■□□□ 1.65
SNX3-203ENST00000368979 O00370 1275 aa25.38■■□□□ 1.65
SNX3-203ENST00000368979 CYP1A2P05177 515 aa25.38■■□□□ 1.65
SNX3-203ENST00000368979 PAX3P23760 479 aa25.38■■□□□ 1.65
SNX3-203ENST00000368979 SGO2Q562F6 1265 aa25.38■■□□□ 1.65
SNX3-203ENST00000368979 CNKSR3Q6P9H4 555 aa25.38■■□□□ 1.65
SNX3-203ENST00000368979 CD300LGQ6UXG3 332 aa25.38■■□□□ 1.65
SNX3-203ENST00000368979 RHOT2Q8IXI1 618 aa25.38■■□□□ 1.65
SNX3-203ENST00000368979 TMEM35BQ8NCS4 154 aa25.38■■□□□ 1.65
SNX3-203ENST00000368979 SLC35G2Q8TBE7 412 aa25.38■■□□□ 1.65
SNX3-203ENST00000368979 ZNF653Q96CK0 615 aa25.38■■□□□ 1.65
SNX3-203ENST00000368979 SENP8Q96LD8 212 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms