RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 VNN2O95498 520 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 C1RP00736 705 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 HLA-DRAP01903 254 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 VCANP13611 3396 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 PIK3CAP42336 1068 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 WDR72Q3MJ13 1102 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 TJAP1Q5JTD0 557 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 TCERG1LQ5VWI1 586 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 METTL23Q86XA0 190 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 ADGRF2Q8IZF7 708 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 ZNF461Q8TAF7 563 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 TAS1R2Q8TE23 839 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 KBTBD7Q8WVZ9 684 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 PLEKHA4Q9H4M7 779 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 ARMCX3Q9UH62 379 aaPredicted RBP16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 OR6C75A6NL08 312 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 SEC24AO95486 1093 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 STAU1O95793 577 aaKnown RBP16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 C8AP07357 584 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 ATICP31939 592 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 CCDC142Q17RM4 750 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 ZNF699Q32M78 642 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 CCDC40Q4G0X9 1142 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 CBWD6Q4V339 395 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 CBWD3Q5JTY5 395 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 CBWD5Q5RIA9 395 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 SPOPLQ6IQ16 392 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 TOP6BLQ8N6T0 577 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 SLC7A14Q8TBB6 771 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 HDAC7Q8WUI4 952 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 SUSD6Q92537 303 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 SLC35C1Q96A29 364 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 PGLYRP2Q96PD5 576 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 PI4K2AQ9BTU6 479 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 ADAM7Q9H2U9 754 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 TMEM8AQ9HCN3 771 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 NXF1Q9UBU9 619 aaKnown RBP16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 NME7Q9Y5B8 376 aa16.18■□□□□ 0.18
SMPDL3A-201ENST00000368440 CCDC195A0A1B0GUA6 201 aa16.17■□□□□ 0.18
SMPDL3A-201ENST00000368440 ZMYND10O75800 440 aa16.17■□□□□ 0.18
SMPDL3A-201ENST00000368440 ACAT1P24752 427 aaKnown RBP16.17■□□□□ 0.18
SMPDL3A-201ENST00000368440 SMAD2Q15796 467 aaKnown RBP16.17■□□□□ 0.18
SMPDL3A-201ENST00000368440 FRMD5Q7Z6J6 570 aa16.17■□□□□ 0.18
SMPDL3A-201ENST00000368440 ZNF707Q96C28 371 aaPredicted RBP16.17■□□□□ 0.18
SMPDL3A-201ENST00000368440 MMS19Q96T76 1030 aa16.17■□□□□ 0.18
SMPDL3A-201ENST00000368440 MRPL45Q9BRJ2 306 aaKnown RBP16.17■□□□□ 0.18
SMPDL3A-201ENST00000368440 CRISPLD1Q9H336 500 aa16.17■□□□□ 0.18
SMPDL3A-201ENST00000368440 VRTNQ9H8Y1 702 aa16.17■□□□□ 0.18
SMPDL3A-201ENST00000368440 DDX43Q9NXZ2 648 aaKnown RBP16.17■□□□□ 0.18
SMPDL3A-201ENST00000368440 GABRDO14764 452 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 CLSTN1O94985 981 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 ATF2P15336 505 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 MXI1P50539 228 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 ADCY1Q08828 1119 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 PUS10Q3MIT2 529 aaKnown RBP16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 LIN9Q5TKA1 542 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 KRT39Q6A163 491 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 SCARA5Q6ZMJ2 495 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 LRRTM3Q86VH5 581 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 GAS2L3Q86XJ1 694 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 TMEM86AQ8N2M4 240 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 SEMA4DQ92854 862 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 NECAB3Q96P71 396 aaPredicted RBP16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 OXCT2Q9BYC2 517 aaPredicted RBP16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 ZCWPW1Q9H0M4 648 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 SMYD3Q9H7B4 428 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 MTMR11A4FU01 709 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 ASS1P00966 412 aaKnown RBP16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 LMO2P25791 158 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 GTF2H1P32780 548 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 DEKP35659 375 aaKnown RBP16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 RAP1GAPP47736 663 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 TNNC1P63316 161 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 ITIH3Q06033 890 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 GPR17Q13304 367 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 SLC39A12Q504Y0 691 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 ZNF667Q5HYK9 610 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 TPGS2Q68CL5 300 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 DPH6Q7L8W6 267 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 GPR149Q86SP6 731 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 THEM5Q8N1Q8 247 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 CMASQ8NFW8 434 aaPredicted RBP16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 SDCBP2Q9H190 292 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 POMKQ9H5K3 350 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 CYP4F11Q9HBI6 524 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 APOBEC3GQ9HC16 384 aaKnown RBP16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 METTL14Q9HCE5 456 aaKnown RBP16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 TMLHEQ9NVH6 421 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 ZDHHC7Q9NXF8 308 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 AFF4Q9UHB7 1163 aaKnown RBP16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 DPP7Q9UHL4 492 aa16.16■□□□□ 0.18
SMPDL3A-201ENST00000368440 A0A0C4DFX4 3053 aa16.15■□□□□ 0.18
SMPDL3A-201ENST00000368440 CDH8P55286 799 aa16.15■□□□□ 0.18
SMPDL3A-201ENST00000368440 CBX2Q14781 532 aaPredicted RBP16.15■□□□□ 0.18
SMPDL3A-201ENST00000368440 SGSM1Q2NKQ1 1148 aa16.15■□□□□ 0.18
SMPDL3A-201ENST00000368440 PPM1LQ5SGD2 360 aa16.15■□□□□ 0.18
SMPDL3A-201ENST00000368440 CES5AQ6NT32 575 aa16.15■□□□□ 0.18
SMPDL3A-201ENST00000368440 ELMSAN1Q6PJG2 1045 aa16.15■□□□□ 0.18
SMPDL3A-201ENST00000368440 C11orf57Q6ZUT1 292 aaPredicted RBP16.15■□□□□ 0.18
SMPDL3A-201ENST00000368440 IRF2BP1Q8IU81 584 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms