RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 PLCB3Q01970 1234 aa19.14■□□□□ 0.65
UBQLN4-201ENST00000368309 LAMTOR4Q0VGL1 99 aa19.14■□□□□ 0.65
UBQLN4-201ENST00000368309 TRPC3Q13507 836 aa19.14■□□□□ 0.65
UBQLN4-201ENST00000368309 CAPN12Q6ZSI9 719 aa19.14■□□□□ 0.65
UBQLN4-201ENST00000368309 RCOR2Q8IZ40 523 aa19.14■□□□□ 0.65
UBQLN4-201ENST00000368309 MRPL4Q9BYD3 311 aaKnown RBP19.14■□□□□ 0.65
UBQLN4-201ENST00000368309 CCDC134Q9H6E4 229 aa19.14■□□□□ 0.65
UBQLN4-201ENST00000368309 KLC4Q9NSK0 619 aa19.14■□□□□ 0.65
UBQLN4-201ENST00000368309 NXF1Q9UBU9 619 aaKnown RBP19.14■□□□□ 0.65
UBQLN4-201ENST00000368309 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.14■□□□□ 0.65
UBQLN4-201ENST00000368309 USP2O75604 605 aaPredicted RBP19.14■□□□□ 0.65
UBQLN4-201ENST00000368309 VGLL4Q14135 290 aa19.14■□□□□ 0.65
UBQLN4-201ENST00000368309 DUOXA2Q1HG44 320 aa19.14■□□□□ 0.65
UBQLN4-201ENST00000368309 HSDL1Q3SXM5 330 aa19.14■□□□□ 0.65
UBQLN4-201ENST00000368309 WDR49Q8IV35 697 aa19.14■□□□□ 0.65
UBQLN4-201ENST00000368309 CEP120Q8N960 986 aa19.14■□□□□ 0.65
UBQLN4-201ENST00000368309 TRAPPC12Q8WVT3 735 aa19.14■□□□□ 0.65
UBQLN4-201ENST00000368309 ACO2Q99798 780 aaKnown RBP19.14■□□□□ 0.65
UBQLN4-201ENST00000368309 KDM4CQ9H3R0 1056 aa19.14■□□□□ 0.65
UBQLN4-201ENST00000368309 RASSF9O75901 435 aa19.13■□□□□ 0.65
UBQLN4-201ENST00000368309 MAGEA4P43358 317 aa19.13■□□□□ 0.65
UBQLN4-201ENST00000368309 FAM160B1Q5W0V3 765 aa19.13■□□□□ 0.65
UBQLN4-201ENST00000368309 ZPBP2Q6X784 338 aa19.13■□□□□ 0.65
UBQLN4-201ENST00000368309 SAYSD1Q9NPB0 183 aa19.13■□□□□ 0.65
UBQLN4-201ENST00000368309 SAE1Q9UBE0 346 aaPredicted RBP19.13■□□□□ 0.65
UBQLN4-201ENST00000368309 LRRD1A4D1F6 860 aa19.13■□□□□ 0.65
UBQLN4-201ENST00000368309 GOLGA8SH3BPF8 625 aa19.13■□□□□ 0.65
UBQLN4-201ENST00000368309 PGK2P07205 417 aa19.13■□□□□ 0.65
UBQLN4-201ENST00000368309 ARSEP51690 589 aa19.13■□□□□ 0.65
UBQLN4-201ENST00000368309 NUGGCQ68CJ6 796 aa19.13■□□□□ 0.65
UBQLN4-201ENST00000368309 HIBCHQ6NVY1 386 aaPredicted RBP19.13■□□□□ 0.65
UBQLN4-201ENST00000368309 RHPN2Q8IUC4 686 aa19.13■□□□□ 0.65
UBQLN4-201ENST00000368309 SUGP1Q8IWZ8 645 aaKnown RBP19.13■□□□□ 0.65
UBQLN4-201ENST00000368309 UBR7Q8N806 425 aa19.13■□□□□ 0.65
UBQLN4-201ENST00000368309 TMEM35BQ8NCS4 154 aa19.13■□□□□ 0.65
UBQLN4-201ENST00000368309 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.13■□□□□ 0.654e-8■■■■□ 20.2
UBQLN4-201ENST00000368309 C10orf88Q9H8K7 445 aa19.13■□□□□ 0.65
UBQLN4-201ENST00000368309 TJP2Q9UDY2 1190 aa19.13■□□□□ 0.65
UBQLN4-201ENST00000368309 ARIH2O95376 493 aa19.13■□□□□ 0.65
UBQLN4-201ENST00000368309 IFNB1P01574 187 aa19.13■□□□□ 0.65
UBQLN4-201ENST00000368309 PRKCBP05771 671 aa19.13■□□□□ 0.65
UBQLN4-201ENST00000368309 GPS1Q13098 491 aa19.13■□□□□ 0.65
UBQLN4-201ENST00000368309 ORC1Q13415 861 aa19.13■□□□□ 0.65
UBQLN4-201ENST00000368309 NEDD9Q14511 834 aa19.13■□□□□ 0.65
UBQLN4-201ENST00000368309 PLCB4Q15147 1175 aa19.13■□□□□ 0.65
UBQLN4-201ENST00000368309 LACTB2Q53H82 288 aaPredicted RBP19.13■□□□□ 0.65
UBQLN4-201ENST00000368309 FAM133BQ5BKY9 247 aaKnown RBP19.13■□□□□ 0.65
UBQLN4-201ENST00000368309 ERICH1Q86X53 443 aa19.13■□□□□ 0.65
UBQLN4-201ENST00000368309 NIF3L1Q9GZT8 377 aa19.13■□□□□ 0.65
UBQLN4-201ENST00000368309 TJP3O95049 919 aa19.12■□□□□ 0.65
UBQLN4-201ENST00000368309 MAPK6Q16659 721 aa19.12■□□□□ 0.65
UBQLN4-201ENST00000368309 MRRFQ96E11 262 aaKnown RBP19.12■□□□□ 0.65
UBQLN4-201ENST00000368309 ADAM33Q9BZ11 813 aa19.12■□□□□ 0.65
UBQLN4-201ENST00000368309 CALB1P05937 261 aa19.12■□□□□ 0.65
UBQLN4-201ENST00000368309 ATP5DP30049 168 aa19.12■□□□□ 0.65
UBQLN4-201ENST00000368309 DYNLT1P63172 113 aa19.12■□□□□ 0.65
UBQLN4-201ENST00000368309 FASTKD3Q14CZ7 662 aaKnown RBP19.12■□□□□ 0.65
UBQLN4-201ENST00000368309 ZKSCAN8Q15776 578 aaPredicted RBP19.12■□□□□ 0.65
UBQLN4-201ENST00000368309 TMEM132AQ24JP5 1023 aa19.12■□□□□ 0.65
UBQLN4-201ENST00000368309 SGSM1Q2NKQ1 1148 aa19.12■□□□□ 0.65
UBQLN4-201ENST00000368309 SPOCD1Q6ZMY3 1216 aa19.12■□□□□ 0.65
UBQLN4-201ENST00000368309 GADL1Q6ZQY3 521 aa19.12■□□□□ 0.65
UBQLN4-201ENST00000368309 BBOF1Q8ND07 529 aa19.12■□□□□ 0.65
UBQLN4-201ENST00000368309 RBM41Q96IZ5 413 aaKnown RBP19.12■□□□□ 0.65
UBQLN4-201ENST00000368309 NLRP4Q96MN2 994 aa19.12■□□□□ 0.65
UBQLN4-201ENST00000368309 TMEM121Q9BTD3 319 aa19.12■□□□□ 0.65
UBQLN4-201ENST00000368309 OGTO15294 1046 aa19.12■□□□□ 0.65
UBQLN4-201ENST00000368309 B4GALT5O43286 388 aa19.12■□□□□ 0.65
UBQLN4-201ENST00000368309 CD19P15391 556 aa19.12■□□□□ 0.65
UBQLN4-201ENST00000368309 RAP1GAPP47736 663 aa19.12■□□□□ 0.65
UBQLN4-201ENST00000368309 EFNA5P52803 228 aa19.12■□□□□ 0.65
UBQLN4-201ENST00000368309 SMTNL2Q2TAL5 461 aa19.12■□□□□ 0.65
UBQLN4-201ENST00000368309 KCNN1Q92952 543 aa19.12■□□□□ 0.65
UBQLN4-201ENST00000368309 ABCF3Q9NUQ8 709 aa19.12■□□□□ 0.65
UBQLN4-201ENST00000368309 POLIQ9UNA4 740 aa19.12■□□□□ 0.65
UBQLN4-201ENST00000368309 SNCAIPQ9Y6H5 919 aa19.12■□□□□ 0.65
UBQLN4-201ENST00000368309 SNX3O60493 162 aa19.11■□□□□ 0.65
UBQLN4-201ENST00000368309 KRT19P08727 400 aa19.11■□□□□ 0.65
UBQLN4-201ENST00000368309 KCNT1Q5JUK3 1230 aa19.11■□□□□ 0.65
UBQLN4-201ENST00000368309 METTL7BQ6UX53 244 aa19.11■□□□□ 0.65
UBQLN4-201ENST00000368309 FUKQ8N0W3 1084 aa19.11■□□□□ 0.65
UBQLN4-201ENST00000368309 SPATC1LQ9H0A9 340 aa19.11■□□□□ 0.65
UBQLN4-201ENST00000368309 TCRBV5S1A1TA0A578 114 aa19.11■□□□□ 0.65
UBQLN4-201ENST00000368309 GTF2A1P52655 376 aaPredicted RBP19.11■□□□□ 0.65
UBQLN4-201ENST00000368309 TMED2Q15363 201 aa19.11■□□□□ 0.65
UBQLN4-201ENST00000368309 ZNF699Q32M78 642 aa19.11■□□□□ 0.65
UBQLN4-201ENST00000368309 TAB3Q8N5C8 712 aaPredicted RBP19.11■□□□□ 0.65
UBQLN4-201ENST00000368309 CCDC77Q9BR77 488 aa19.11■□□□□ 0.65
UBQLN4-201ENST00000368309 NSRP1Q9H0G5 558 aaKnown RBP19.11■□□□□ 0.65
UBQLN4-201ENST00000368309 ZWILCHQ9H900 591 aa19.11■□□□□ 0.65
UBQLN4-201ENST00000368309 INO80B-WBP1J3KQ70 363 aa19.11■□□□□ 0.65
UBQLN4-201ENST00000368309 CDH16O75309 829 aa19.11■□□□□ 0.65
UBQLN4-201ENST00000368309 CSDE1O75534 798 aaKnown RBP19.11■□□□□ 0.65
UBQLN4-201ENST00000368309 PECAM1P16284 738 aaPredicted RBP19.11■□□□□ 0.65
UBQLN4-201ENST00000368309 RFC1P35251 1148 aaPredicted RBP19.11■□□□□ 0.65
UBQLN4-201ENST00000368309 CDH8P55286 799 aa19.11■□□□□ 0.65
UBQLN4-201ENST00000368309 ITIH4Q14624 930 aa19.11■□□□□ 0.65
UBQLN4-201ENST00000368309 TMEM63BQ5T3F8 832 aa19.11■□□□□ 0.65
UBQLN4-201ENST00000368309 IER5Q5VY09 327 aa19.11■□□□□ 0.65
UBQLN4-201ENST00000368309 DENND1BQ6P3S1 775 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms