RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 FTHL17Q9BXU8 183 aa11.28□□□□□ -0.6
PTPRK-205ENST00000368213 CYP39A1Q9NYL5 469 aa11.28□□□□□ -0.6
PTPRK-205ENST00000368213 UXTQ9UBK9 157 aaPredicted RBP11.28□□□□□ -0.6
PTPRK-205ENST00000368213 MAP2P11137 1827 aaKnown RBP11.28□□□□□ -0.6
PTPRK-205ENST00000368213 NDUFS3O75489 264 aa11.28□□□□□ -0.6
PTPRK-205ENST00000368213 KRT14P02533 472 aa11.28□□□□□ -0.6
PTPRK-205ENST00000368213 CHRNA3P32297 505 aa11.28□□□□□ -0.6
PTPRK-205ENST00000368213 PHEXP78562 749 aa11.28□□□□□ -0.6
PTPRK-205ENST00000368213 RBBP7Q16576 425 aa11.28□□□□□ -0.6
PTPRK-205ENST00000368213 METTL16Q86W50 562 aaKnown RBP11.28□□□□□ -0.6
PTPRK-205ENST00000368213 RCOR2Q8IZ40 523 aa11.28□□□□□ -0.6
PTPRK-205ENST00000368213 IL17RBQ9NRM6 502 aa11.28□□□□□ -0.6
PTPRK-205ENST00000368213 AIPL1Q9NZN9 384 aa11.28□□□□□ -0.6
PTPRK-205ENST00000368213 VPS28Q9UK41 221 aa11.28□□□□□ -0.6
PTPRK-205ENST00000368213 DBR1Q9UK59 544 aaKnown RBP11.28□□□□□ -0.6
PTPRK-205ENST00000368213 HPS5Q9UPZ3 1129 aa11.28□□□□□ -0.6
PTPRK-205ENST00000368213 CNTNAP2Q9UHC6 1331 aa11.28□□□□□ -0.6
PTPRK-205ENST00000368213 WDR91A4D1P6 747 aa11.28□□□□□ -0.6
PTPRK-205ENST00000368213 GARTP22102 1010 aa11.28□□□□□ -0.6
PTPRK-205ENST00000368213 EPHB2P29323 1055 aa11.28□□□□□ -0.6
PTPRK-205ENST00000368213 CRY2Q49AN0 593 aa11.28□□□□□ -0.6
PTPRK-205ENST00000368213 HP1BP3Q5SSJ5 553 aaPredicted RBP11.28□□□□□ -0.6
PTPRK-205ENST00000368213 PPP4R4Q6NUP7 873 aa11.28□□□□□ -0.6
PTPRK-205ENST00000368213 NIPA1Q7RTP0 329 aa11.28□□□□□ -0.6
PTPRK-205ENST00000368213 CGRRF1Q99675 332 aa11.28□□□□□ -0.6
PTPRK-205ENST00000368213 COG4Q9H9E3 785 aa11.28□□□□□ -0.6
PTPRK-205ENST00000368213 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.28□□□□□ -0.6
PTPRK-205ENST00000368213 SNX24Q9Y343 169 aa11.28□□□□□ -0.6
PTPRK-205ENST00000368213 TXNDC9O14530 226 aa11.27□□□□□ -0.6
PTPRK-205ENST00000368213 MAPK13O15264 365 aa11.27□□□□□ -0.6
PTPRK-205ENST00000368213 UBA1P22314 1058 aaKnown RBP11.27□□□□□ -0.6
PTPRK-205ENST00000368213 RIC1Q4ADV7 1423 aa11.27□□□□□ -0.6
PTPRK-205ENST00000368213 CFAP61Q8NHU2 1237 aa11.27□□□□□ -0.6
PTPRK-205ENST00000368213 CYFIP2Q96F07 1278 aa11.27□□□□□ -0.6
PTPRK-205ENST00000368213 PPP1R2P1Q96PQ5 205 aa11.27□□□□□ -0.6
PTPRK-205ENST00000368213 GTSE1Q9NYZ3 720 aa11.27□□□□□ -0.6
PTPRK-205ENST00000368213 PKP3Q9Y446 797 aa11.27□□□□□ -0.6
PTPRK-205ENST00000368213 ADGRB2O60241 1585 aa11.27□□□□□ -0.6
PTPRK-205ENST00000368213 COPEO14579 308 aa11.27□□□□□ -0.6
PTPRK-205ENST00000368213 RASGRF2O14827 1237 aa11.27□□□□□ -0.6
PTPRK-205ENST00000368213 CTCFP49711 727 aaPredicted RBP11.27□□□□□ -0.6
PTPRK-205ENST00000368213 FOXD4Q12950 439 aaPredicted RBP11.27□□□□□ -0.6
PTPRK-205ENST00000368213 GRIK5Q16478 980 aa11.27□□□□□ -0.6
PTPRK-205ENST00000368213 CCDC149Q6ZUS6 474 aa11.27□□□□□ -0.6
PTPRK-205ENST00000368213 SYT15Q9BQS2 421 aa11.27□□□□□ -0.6
PTPRK-205ENST00000368213 TRIM45Q9H8W5 580 aaPredicted RBP11.27□□□□□ -0.6
PTPRK-205ENST00000368213 SENP1Q9P0U3 644 aa11.27□□□□□ -0.6
PTPRK-205ENST00000368213 TAF6LQ9Y6J9 622 aa11.27□□□□□ -0.6
PTPRK-205ENST00000368213 TTC26A0AVF1 554 aa11.27□□□□□ -0.61
PTPRK-205ENST00000368213 ANP32DO95626 131 aa11.27□□□□□ -0.61
PTPRK-205ENST00000368213 VDRP11473 427 aa11.27□□□□□ -0.61
PTPRK-205ENST00000368213 UCHL3P15374 230 aa11.27□□□□□ -0.61
PTPRK-205ENST00000368213 CCT5P48643 541 aa11.27□□□□□ -0.61
PTPRK-205ENST00000368213 SESN2P58004 480 aaPredicted RBP11.27□□□□□ -0.61
PTPRK-205ENST00000368213 CREMQ03060 361 aa11.27□□□□□ -0.61
PTPRK-205ENST00000368213 PDK1Q15118 436 aa11.27□□□□□ -0.61
PTPRK-205ENST00000368213 PPM1NQ8N819 430 aa11.27□□□□□ -0.61
PTPRK-205ENST00000368213 BPIFA3Q9BQP9 254 aa11.27□□□□□ -0.61
PTPRK-205ENST00000368213 APOL5Q9BWW9 433 aa11.27□□□□□ -0.61
PTPRK-205ENST00000368213 LATS2Q9NRM7 1088 aa11.27□□□□□ -0.61
PTPRK-205ENST00000368213 KIAA1257Q9ULG3 409 aa11.27□□□□□ -0.61
PTPRK-205ENST00000368213 BCAT1P54687 386 aa11.27□□□□□ -0.61
PTPRK-205ENST00000368213 COPS2P61201 443 aa11.27□□□□□ -0.61
PTPRK-205ENST00000368213 WASHC5Q12768 1159 aa11.27□□□□□ -0.61
PTPRK-205ENST00000368213 SEC23AQ15436 765 aa11.27□□□□□ -0.61
PTPRK-205ENST00000368213 CBWD2Q8IUF1 395 aa11.27□□□□□ -0.61
PTPRK-205ENST00000368213 ITGA11Q9UKX5 1188 aa11.27□□□□□ -0.61
PTPRK-205ENST00000368213 A0A1W2PQC6 194 aa11.27□□□□□ -0.61
PTPRK-205ENST00000368213 WTIPA6NIX2 430 aaPredicted RBP11.27□□□□□ -0.61
PTPRK-205ENST00000368213 KPNA7A9QM74 516 aa11.27□□□□□ -0.61
PTPRK-205ENST00000368213 SP100P23497 879 aaPredicted RBP11.27□□□□□ -0.61
PTPRK-205ENST00000368213 TUFMP49411 452 aaKnown RBP11.27□□□□□ -0.61
PTPRK-205ENST00000368213 PRMT2P55345 433 aa11.27□□□□□ -0.61
PTPRK-205ENST00000368213 GRB10Q13322 594 aa11.27□□□□□ -0.61
PTPRK-205ENST00000368213 TRIM59Q8IWR1 403 aa11.27□□□□□ -0.61
PTPRK-205ENST00000368213 GIPC2Q8TF65 315 aa11.27□□□□□ -0.61
PTPRK-205ENST00000368213 USP13Q92995 863 aaPredicted RBP11.27□□□□□ -0.61
PTPRK-205ENST00000368213 CASS4Q9NQ75 786 aa11.27□□□□□ -0.61
PTPRK-205ENST00000368213 UVRAGQ9P2Y5 699 aa11.27□□□□□ -0.61
PTPRK-205ENST00000368213 ARHGAP10A1A4S6 786 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 PCDH8O95206 1070 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 RAP1GAPP47736 663 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 OXCT1P55809 520 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 CAV1Q03135 178 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 P3H1Q32P28 736 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 ACBD5Q5T8D3 534 aaPredicted RBP11.26□□□□□ -0.61
PTPRK-205ENST00000368213 RASGRP2Q7LDG7 609 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 WDR49Q8IV35 697 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 RNPC3Q96LT9 517 aaKnown RBP11.26□□□□□ -0.61
PTPRK-205ENST00000368213 ARHGEF28Q8N1W1 1705 aaKnown RBP11.26□□□□□ -0.61
PTPRK-205ENST00000368213 SMIM24O75264 130 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 RHOCP08134 193 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 OAS2P29728 719 aaKnown RBP11.26□□□□□ -0.61
PTPRK-205ENST00000368213 PSMC6P62333 389 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 GNGT1P63211 74 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 PRKCQQ04759 706 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 PDAP1Q13442 181 aaKnown RBP11.26□□□□□ -0.61
PTPRK-205ENST00000368213 ATG16L1Q676U5 607 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 PTRHD1Q6GMV3 140 aaKnown RBP11.26□□□□□ -0.61
PTPRK-205ENST00000368213 ZNF677Q86XU0 584 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms