RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 FEZF2Q8TBJ5 459 aa14.88□□□□□ -0.03
USF1-202ENST00000368020 ARL8AQ96BM9 186 aa14.88□□□□□ -0.03
USF1-202ENST00000368020 TXLNGYQ9BZA5 131 aa14.88□□□□□ -0.03
USF1-202ENST00000368020 NEUROG2Q9H2A3 272 aa14.88□□□□□ -0.03
USF1-202ENST00000368020 ASB7Q9H672 318 aa14.88□□□□□ -0.03
USF1-202ENST00000368020 CISHQ9NSE2 258 aa14.88□□□□□ -0.03
USF1-202ENST00000368020 FLRT1Q9NZU1 646 aa14.88□□□□□ -0.03
USF1-202ENST00000368020 WHRNQ9P202 907 aa14.88□□□□□ -0.03
USF1-202ENST00000368020 CHORDC1Q9UHD1 332 aaPredicted RBP14.88□□□□□ -0.03
USF1-202ENST00000368020 NFS1Q9Y697 457 aa14.88□□□□□ -0.03
USF1-202ENST00000368020 KAT6AQ92794 2004 aa14.87□□□□□ -0.03
USF1-202ENST00000368020 PPFIA4O75335 1185 aa14.87□□□□□ -0.03
USF1-202ENST00000368020 PAEPP09466 180 aa14.87□□□□□ -0.03
USF1-202ENST00000368020 RARAP10276 462 aa14.87□□□□□ -0.03
USF1-202ENST00000368020 ATICP31939 592 aa14.87□□□□□ -0.03
USF1-202ENST00000368020 MYL6P60660 151 aa14.87□□□□□ -0.03
USF1-202ENST00000368020 LMNB2Q03252 620 aa14.87□□□□□ -0.03
USF1-202ENST00000368020 PPP1R7Q15435 360 aa14.87□□□□□ -0.03
USF1-202ENST00000368020 SIX1Q15475 284 aaPredicted RBP14.87□□□□□ -0.03
USF1-202ENST00000368020 UAP1Q16222 522 aaPredicted RBP14.87□□□□□ -0.03
USF1-202ENST00000368020 CCL14Q16627 93 aa14.87□□□□□ -0.03
USF1-202ENST00000368020 MFSD14CQ5VZR4 134 aa14.87□□□□□ -0.03
USF1-202ENST00000368020 CEP128Q6ZU80 1094 aa14.87□□□□□ -0.03
USF1-202ENST00000368020 BBOF1Q8ND07 529 aa14.87□□□□□ -0.03
USF1-202ENST00000368020 PXYLP1Q8TE99 480 aa14.87□□□□□ -0.03
USF1-202ENST00000368020 FAM212AQ96EL1 285 aa14.87□□□□□ -0.03
USF1-202ENST00000368020 RBM41Q96IZ5 413 aaKnown RBP14.87□□□□□ -0.03
USF1-202ENST00000368020 PABPC3Q9H361 631 aaKnown RBP14.87□□□□□ -0.03
USF1-202ENST00000368020 CEP350Q5VT06 3117 aa14.87□□□□□ -0.03
USF1-202ENST00000368020 UMODL1Q5DID0 1318 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 NDC80O14777 642 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 EIF3HO15372 352 aaKnown RBP eCLIP14.86□□□□□ -0.03
USF1-202ENST00000368020 TLR3O15455 904 aaKnown RBP14.86□□□□□ -0.03
USF1-202ENST00000368020 CST3P01034 146 aaPredicted RBP14.86□□□□□ -0.03
USF1-202ENST00000368020 PMS2P54278 862 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 HNRNPH2P55795 449 aaKnown RBP14.86□□□□□ -0.03
USF1-202ENST00000368020 COPS2P61201 443 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 CDC42EP1Q00587 391 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 ZNF844Q08AG5 666 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 IFFO1Q0D2I5 559 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 PIGHQ14442 188 aaPredicted RBP14.86□□□□□ -0.03
USF1-202ENST00000368020 ZNF667Q5HYK9 610 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 DENND2CQ68D51 928 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 AADACL2Q6P093 401 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 MMS22LQ6ZRQ5 1243 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 CCHCR1Q8TD31 782 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 DDX27Q96GQ7 796 aaKnown RBP14.86□□□□□ -0.03
USF1-202ENST00000368020 TRIM31Q9BZY9 425 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 CDT1Q9H211 546 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 LHX5Q9H2C1 402 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 PDGFCQ9NRA1 345 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 TTLL13PA6NNM8 815 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 ZNF865P0CJ78 1059 aaPredicted RBP14.86□□□□□ -0.03
USF1-202ENST00000368020 INSRRP14616 1297 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 IRAK1P51617 712 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 CLCN3P51790 818 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 PLTPP55058 493 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 DUSP28Q4G0W2 176 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 SEZ6Q53EL9 994 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 DNAJC24Q6P3W2 148 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 PASD1Q8IV76 773 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 THNSL1Q8IYQ7 743 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 RCOR2Q8IZ40 523 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 LINC01465Q8N7H1 131 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 TRIB2Q92519 343 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 COPS5Q92905 334 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 ELMO3Q96BJ8 720 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 BCO2Q9BYV7 579 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 STMN4Q9H169 189 aaPredicted RBP14.86□□□□□ -0.03
USF1-202ENST00000368020 XYLT2Q9H1B5 865 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 VRTNQ9H8Y1 702 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 CYP3A43Q9HB55 503 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 GRHL1Q9NZI5 618 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 ATP8A1Q9Y2Q0 1164 aa14.86□□□□□ -0.03
USF1-202ENST00000368020 ITIH2P19823 946 aa14.85□□□□□ -0.03
USF1-202ENST00000368020 ASPAP45381 313 aa14.85□□□□□ -0.03
USF1-202ENST00000368020 RPL21P46778 160 aaKnown RBP14.85□□□□□ -0.03
USF1-202ENST00000368020 PCBP1Q15365 356 aaKnown RBP eCLIP14.85□□□□□ -0.03
USF1-202ENST00000368020 CCNG2Q16589 344 aa14.85□□□□□ -0.03
USF1-202ENST00000368020 TTC27Q6P3X3 843 aa14.85□□□□□ -0.03
USF1-202ENST00000368020 LRRC31Q6UY01 552 aa14.85□□□□□ -0.03
USF1-202ENST00000368020 ZNF410Q86VK4 478 aa14.85□□□□□ -0.03
USF1-202ENST00000368020 CCDC50Q8IVM0 306 aa14.85□□□□□ -0.03
USF1-202ENST00000368020 NIPA2Q8N8Q9 360 aa14.85□□□□□ -0.03
USF1-202ENST00000368020 C3orf20Q8ND61 904 aa14.85□□□□□ -0.03
USF1-202ENST00000368020 ATL2Q8NHH9 583 aa14.85□□□□□ -0.03
USF1-202ENST00000368020 ART4Q93070 314 aa14.85□□□□□ -0.03
USF1-202ENST00000368020 FAM84AQ96KN4 292 aa14.85□□□□□ -0.03
USF1-202ENST00000368020 FAM107BQ9H098 131 aa14.85□□□□□ -0.03
USF1-202ENST00000368020 IFT122Q9HBG6 1241 aa14.85□□□□□ -0.03
USF1-202ENST00000368020 DDX56Q9NY93 547 aaKnown RBP14.85□□□□□ -0.03
USF1-202ENST00000368020 WDR35Q9P2L0 1181 aa14.85□□□□□ -0.03
USF1-202ENST00000368020 SNX24Q9Y343 169 aa14.85□□□□□ -0.03
USF1-202ENST00000368020 RALGAPA2Q2PPJ7 1873 aa14.85□□□□□ -0.03
USF1-202ENST00000368020 CITO14578 2027 aa14.85□□□□□ -0.03
USF1-202ENST00000368020 FAM170AA1A519 330 aa14.84□□□□□ -0.03
USF1-202ENST00000368020 TMEM191CA6NGB0 347 aa14.84□□□□□ -0.03
USF1-202ENST00000368020 HOXD8P13378 290 aaPredicted RBP14.84□□□□□ -0.03
USF1-202ENST00000368020 RARGP13631 454 aa14.84□□□□□ -0.03
USF1-202ENST00000368020 PTPN7P35236 360 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms