RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 AGPAT1Q99943 283 aa12.96□□□□□ -0.34
TPR-201ENST00000367478 UBXN6Q9BZV1 441 aa12.96□□□□□ -0.34
TPR-201ENST00000367478 GREM2Q9H772 168 aa12.96□□□□□ -0.34
TPR-201ENST00000367478 KLHL20Q9Y2M5 609 aa12.96□□□□□ -0.34
TPR-201ENST00000367478 SLCO1B7G3V0H7 640 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 THRAP10827 490 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 WDR36Q8NI36 951 aaKnown RBP12.95□□□□□ -0.34
TPR-201ENST00000367478 PCDHA6Q9UN73 950 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 PCDHA8Q9Y5H6 950 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 EIF2AK2P19525 551 aaKnown RBP12.95□□□□□ -0.34
TPR-201ENST00000367478 USP11P51784 963 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 C1orf54Q8WWF1 131 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 YIPF2Q9BWQ6 316 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 RSAD1Q9HA92 442 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.95□□□□□ -0.34
TPR-201ENST00000367478 SSU72P8A0A1W2PR75 194 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 A8MXQ7 604 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 CLPTM1O96005 669 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 CYP19A1P11511 503 aaPredicted RBP12.95□□□□□ -0.34
TPR-201ENST00000367478 ATP6V1B1P15313 513 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 JADE3Q92613 823 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 MCRS1Q96EZ8 462 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.95□□□□□ -0.34
TPR-201ENST00000367478 STX11O75558 287 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 P4HBP07237 508 aaKnown RBP12.95□□□□□ -0.34
TPR-201ENST00000367478 SNRPFP62306 86 aaKnown RBP12.95□□□□□ -0.34
TPR-201ENST00000367478 C12orf60Q5U649 245 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 PLEKHA7Q6IQ23 1121 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 VTA1Q9NP79 307 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 MRPL39Q9NYK5 338 aaKnown RBP12.95□□□□□ -0.34
TPR-201ENST00000367478 CYP39A1Q9NYL5 469 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 GUCY1A2P33402 732 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 HNMTP50135 292 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 ZNF438Q7Z4V0 828 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 HDHD2Q9H0R4 259 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 MEI4A8MW99 385 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 TM9SF1O15321 606 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 APBA3O96018 575 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 CDK8P49336 464 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 ZNF211Q13398 564 aaPredicted RBP12.95□□□□□ -0.34
TPR-201ENST00000367478 TSNQ15631 228 aaKnown RBP12.95□□□□□ -0.34
TPR-201ENST00000367478 SPANXN2Q5MJ10 180 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 ANKS6Q68DC2 871 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 WDR48Q8TAF3 677 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 NAT9Q9BTE0 207 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 PHACTR1Q9C0D0 580 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 TUFT1Q9NNX1 390 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 AGO2Q9UKV8 859 aaKnown RBP12.95□□□□□ -0.34
TPR-201ENST00000367478 ASMTLO95671 621 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 MAPKAPK2P49137 400 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 SESN2P58004 480 aaPredicted RBP12.95□□□□□ -0.34
TPR-201ENST00000367478 ALDH6A1Q02252 535 aaKnown RBP12.95□□□□□ -0.34
TPR-201ENST00000367478 INTS2Q9H0H0 1204 aaKnown RBP12.95□□□□□ -0.34
TPR-201ENST00000367478 MYL3P08590 195 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 DARSP14868 501 aaKnown RBP12.95□□□□□ -0.34
TPR-201ENST00000367478 ALOX15P16050 662 aaPredicted RBP12.95□□□□□ -0.34
TPR-201ENST00000367478 PEG10Q86TG7 708 aaKnown RBP12.95□□□□□ -0.34
TPR-201ENST00000367478 HMG20AQ9NP66 347 aa12.95□□□□□ -0.34
TPR-201ENST00000367478 CTCFP49711 727 aaPredicted RBP12.94□□□□□ -0.34
TPR-201ENST00000367478 STX4Q12846 297 aa12.94□□□□□ -0.34
TPR-201ENST00000367478 ATAD3BQ5T9A4 648 aa12.94□□□□□ -0.34
TPR-201ENST00000367478 RAD54BQ9Y620 910 aa12.94□□□□□ -0.34
TPR-201ENST00000367478 LAMC1P11047 1609 aa12.94□□□□□ -0.34
TPR-201ENST00000367478 PSMC5P62195 406 aa12.94□□□□□ -0.34
TPR-201ENST00000367478 DDR2Q16832 855 aa12.94□□□□□ -0.34
TPR-201ENST00000367478 CCNJLQ8IV13 435 aa12.94□□□□□ -0.34
TPR-201ENST00000367478 L3MBTL3Q96JM7 780 aaPredicted RBP12.94□□□□□ -0.34
TPR-201ENST00000367478 ITIH6Q6UXX5 1313 aa12.94□□□□□ -0.34
TPR-201ENST00000367478 ZNF862O60290 1169 aa12.94□□□□□ -0.34
TPR-201ENST00000367478 HOXD10P28358 340 aa12.94□□□□□ -0.34
TPR-201ENST00000367478 CENPCQ03188 943 aa12.94□□□□□ -0.34
TPR-201ENST00000367478 TRIM25Q14258 630 aaKnown RBP12.94□□□□□ -0.34
TPR-201ENST00000367478 RCN1Q15293 331 aa12.94□□□□□ -0.34
TPR-201ENST00000367478 NDUFAF6Q330K2 333 aa12.94□□□□□ -0.34
TPR-201ENST00000367478 E2F7Q96AV8 911 aa12.94□□□□□ -0.34
TPR-201ENST00000367478 THUMPD3Q9BV44 507 aaKnown RBP12.94□□□□□ -0.34
TPR-201ENST00000367478 ADGRA2Q96PE1 1338 aa12.94□□□□□ -0.34
TPR-201ENST00000367478 VWA5AO00534 786 aa12.94□□□□□ -0.34
TPR-201ENST00000367478 CYP51A1Q16850 503 aa12.94□□□□□ -0.34
TPR-201ENST00000367478 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.94□□□□□ -0.34
TPR-201ENST00000367478 ZNF341Q9BYN7 854 aa12.94□□□□□ -0.34
TPR-201ENST00000367478 COPG2Q9UBF2 871 aa12.94□□□□□ -0.34
TPR-201ENST00000367478 RFX7Q2KHR2 1363 aa12.94□□□□□ -0.34
TPR-201ENST00000367478 KLHL18O94889 574 aa12.94□□□□□ -0.34
TPR-201ENST00000367478 FBXW10Q5XX13 1052 aa12.94□□□□□ -0.34
TPR-201ENST00000367478 ZCCHC8Q6NZY4 707 aaKnown RBP12.94□□□□□ -0.34
TPR-201ENST00000367478 SPATA2LQ8IUW3 424 aaPredicted RBP12.94□□□□□ -0.34
TPR-201ENST00000367478 PCMTD2Q9NV79 361 aa12.94□□□□□ -0.34
TPR-201ENST00000367478 BCL10O95999 233 aa12.94□□□□□ -0.34
TPR-201ENST00000367478 ATP6V1C1P21283 382 aa12.94□□□□□ -0.34
TPR-201ENST00000367478 GRIK1P39086 918 aa12.94□□□□□ -0.34
TPR-201ENST00000367478 STAT5AP42229 794 aa12.94□□□□□ -0.34
TPR-201ENST00000367478 STAT5BP51692 787 aa12.94□□□□□ -0.34
TPR-201ENST00000367478 RPS6P62753 249 aaKnown RBP12.94□□□□□ -0.34
TPR-201ENST00000367478 NAPEPLDQ6IQ20 393 aa12.94□□□□□ -0.34
TPR-201ENST00000367478 ZNF677Q86XU0 584 aa12.94□□□□□ -0.34
TPR-201ENST00000367478 GSPT2Q8IYD1 628 aaKnown RBP12.94□□□□□ -0.34
TPR-201ENST00000367478 ELOA2Q8IYF1 753 aaPredicted RBP12.94□□□□□ -0.34
TPR-201ENST00000367478 CENPLQ8N0S6 344 aaPredicted RBP12.94□□□□□ -0.34
TPR-201ENST00000367478 FKBP6O75344 327 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms