RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 SPATA31A7Q8IWB4 1347 aa12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 ATF7IP2Q5U623 682 aa12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 FIS1Q9Y3D6 152 aa12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 TIMM44O43615 452 aa12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 GFAPP14136 432 aa12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 PTPRN2Q92932 1015 aa12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 OSBPL1AQ9BXW6 950 aa12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 SCHIP1Q9P0W5 487 aaPredicted RBP12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 SNAP25P60880 206 aa12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 TSTA3Q13630 321 aaPredicted RBP12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 TERB1Q8NA31 727 aa12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 F8VZ95 297 aa12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 GPR101Q96P66 508 aaPredicted RBP12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 CYP3A43Q9HB55 503 aa12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 CDYLQ9Y232 598 aa12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 MEGF6O75095 1541 aa12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 ANXA9O76027 345 aa12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 MYBP10242 640 aa12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 TXNP10599 105 aaKnown RBP12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 GPD1P21695 349 aa12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 TNFRSF8P28908 595 aa12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 C1QBPQ07021 282 aaKnown RBP12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 C1orf228Q6PIY5 440 aa12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 PID1Q7Z2X4 250 aa12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 MANSC1Q9H8J5 431 aa12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 IL1RAPL1Q9NZN1 696 aa12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 DCDC2Q9UHG0 476 aa12.58□□□□□ -0.4
CDC42BPA-203ENST00000366766 ECM2O94769 699 aaPredicted RBP12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 F9P00740 461 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 SNAPC2Q13487 334 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 TMEM117Q9H0C3 514 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 PCDHGB4Q9UN71 923 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 H0Y626 953 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 TRIM16O95361 564 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 MYL3P08590 195 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 TGFB3P10600 412 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 ATICP31939 592 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 MRPS25P82663 173 aaKnown RBP12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 PJA2O43164 708 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 POU5F1BQ06416 359 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 CHCHD3Q9NX63 227 aaKnown RBP12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 RBP3P10745 1247 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 ZNF135P52742 658 aaPredicted RBP12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 NUDT18Q6ZVK8 323 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 SCN4BQ8IWT1 228 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 NSL1Q96IY1 281 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 KANSL1LA0AUZ9 987 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 ITGA8P53708 1063 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 IL1RL1Q01638 556 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 SLC29A2Q14542 456 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 MFN1Q8IWA4 741 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 FOPNLQ96NB1 174 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 PARK7Q99497 189 aaKnown RBP12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 WARS2Q9UGM6 360 aaKnown RBP12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 MYO18AQ92614 2054 aaKnown RBP12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 FGFR2P21802 821 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 SARSP49591 514 aaKnown RBP12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 RGS4P49798 205 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 HMGCS2P54868 508 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 PTENP60484 403 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 ERP27Q96DN0 273 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 NPHS2Q9NP85 383 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 TNS2Q63HR2 1409 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 SLCO1B7G3V0H7 640 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 RIN3Q8TB24 985 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 TRIM51Q9BSJ1 452 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 MSH4O15457 936 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 NAA30Q147X3 362 aaPredicted RBP12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 SLC26A7Q8TE54 656 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 PARD3BQ8TEW8 1205 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 MPP6Q9NZW5 540 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 LMO7Q8WWI1 1683 aa12.57□□□□□ -0.4
CDC42BPA-203ENST00000366766 STX5Q13190 355 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 MYCBPAPQ8TBZ2 947 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 SUPT3HO75486 399 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 TBC1D19Q8N5T2 526 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 DACT3Q96B18 629 aaPredicted RBP12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 PHACTR1Q9C0D0 580 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 BRD8Q9H0E9 1235 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 PPP2R3BQ9Y5P8 575 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 A0A087X0T9 212 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 LRRC10BA6NIK2 292 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 FAM228BP0C875 321 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 SLC9A1P19634 815 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 CARSP49589 748 aaKnown RBP12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 TOB1P50616 345 aaPredicted RBP12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 FAM83EQ2M2I3 478 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 ZNF555Q8NEP9 628 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 SLC16A10Q8TF71 515 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 HPDLQ96IR7 371 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 MTFR1Q15390 333 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 KYNUQ16719 465 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 CPA5Q8WXQ8 436 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 TBCBQ99426 244 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 MLXIPLQ9NP71 852 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 CCDC195A0A1B0GUA6 201 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 AFG1LQ8WV93 481 aa12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 NAF1Q96HR8 494 aaKnown RBP12.56□□□□□ -0.4
CDC42BPA-203ENST00000366766 ARHGEF38Q9NXL2 777 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms