RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 JPH2Q9BR39 696 aaPredicted RBP12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 RPP25Q9BUL9 199 aaKnown RBP12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 EDEM3Q9BZQ6 932 aa12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 TTYH3Q9C0H2 523 aa12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 POLR3FQ9H1D9 316 aaPredicted RBP12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 STK39Q9UEW8 545 aa12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 GMEB2Q9UKD1 530 aa12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 CAPN11Q9UMQ6 739 aa12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 SIK3Q9Y2K2 1263 aa12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 CCDC169A6NNP5 214 aa12.14□□□□□ -0.47
CSNK1E-202ENST00000366216 MAPK13O15264 365 aa12.14□□□□□ -0.47
CSNK1E-202ENST00000366216 INPPL1O15357 1258 aa12.14□□□□□ -0.47
CSNK1E-202ENST00000366216 TBC1D4O60343 1298 aa12.14□□□□□ -0.47
CSNK1E-202ENST00000366216 LAMP2P13473 410 aa12.14□□□□□ -0.47
CSNK1E-202ENST00000366216 NAMPTP43490 491 aa12.14□□□□□ -0.47
CSNK1E-202ENST00000366216 GOLGA8FQ08AF8 430 aa12.14□□□□□ -0.47
CSNK1E-202ENST00000366216 GOLGA8DPQ0D2H9 430 aa12.14□□□□□ -0.47
CSNK1E-202ENST00000366216 TAS1R1Q7RTX1 841 aa12.14□□□□□ -0.47
CSNK1E-202ENST00000366216 TCP11Q8WWU5 503 aa12.14□□□□□ -0.47
CSNK1E-202ENST00000366216 SMG7Q92540 1137 aaKnown RBP12.14□□□□□ -0.47
CSNK1E-202ENST00000366216 ZNF707Q96C28 371 aaPredicted RBP12.14□□□□□ -0.47
CSNK1E-202ENST00000366216 DDX23Q9BUQ8 820 aaKnown RBP12.14□□□□□ -0.47
CSNK1E-202ENST00000366216 MRPL17Q9NRX2 175 aaKnown RBP12.14□□□□□ -0.47
CSNK1E-202ENST00000366216 TBC1D13Q9NVG8 400 aa12.14□□□□□ -0.47
CSNK1E-202ENST00000366216 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.14□□□□□ -0.47
CSNK1E-202ENST00000366216 ARHGAP28Q9P2N2 729 aa12.14□□□□□ -0.47
CSNK1E-202ENST00000366216 DPP7Q9UHL4 492 aa12.14□□□□□ -0.47
CSNK1E-202ENST00000366216 ANGPTL2Q9UKU9 493 aa12.14□□□□□ -0.47
CSNK1E-202ENST00000366216 TBX20Q9UMR3 447 aa12.14□□□□□ -0.47
CSNK1E-202ENST00000366216 AKT3Q9Y243 479 aa12.14□□□□□ -0.47
CSNK1E-202ENST00000366216 FRMD4BQ9Y2L6 1034 aa12.14□□□□□ -0.47
CSNK1E-202ENST00000366216 MTF2Q9Y483 593 aaPredicted RBP12.14□□□□□ -0.47
CSNK1E-202ENST00000366216 NUMBLQ9Y6R0 609 aa12.14□□□□□ -0.47
CSNK1E-202ENST00000366216 IGKV6-21A0A0C4DH24 114 aa12.13□□□□□ -0.47
CSNK1E-202ENST00000366216 TTC26A0AVF1 554 aa12.13□□□□□ -0.47
CSNK1E-202ENST00000366216 RFPL2O75678 378 aa12.13□□□□□ -0.47
CSNK1E-202ENST00000366216 AFPP02771 609 aaKnown RBP12.13□□□□□ -0.47
CSNK1E-202ENST00000366216 DARSP14868 501 aaKnown RBP12.13□□□□□ -0.47
CSNK1E-202ENST00000366216 KRT9P35527 623 aa12.13□□□□□ -0.47
CSNK1E-202ENST00000366216 MAGEA9P43362 315 aa12.13□□□□□ -0.47
CSNK1E-202ENST00000366216 CASP4P49662 377 aa12.13□□□□□ -0.47
CSNK1E-202ENST00000366216 GPC3P51654 580 aa12.13□□□□□ -0.47
CSNK1E-202ENST00000366216 MCCD1P59942 119 aaPredicted RBP12.13□□□□□ -0.47
CSNK1E-202ENST00000366216 ZBED6P86452 979 aa12.13□□□□□ -0.47
CSNK1E-202ENST00000366216 RNASELQ05823 741 aaKnown RBP12.13□□□□□ -0.47
CSNK1E-202ENST00000366216 SPEM2Q0P670 501 aa12.13□□□□□ -0.47
CSNK1E-202ENST00000366216 KCNH2Q12809 1159 aa12.13□□□□□ -0.47
CSNK1E-202ENST00000366216 UBXN2BQ14CS0 331 aa12.13□□□□□ -0.47
CSNK1E-202ENST00000366216 NOMO2Q5JPE7 1267 aa12.13□□□□□ -0.47
CSNK1E-202ENST00000366216 FAM186BQ8IYM0 893 aa12.13□□□□□ -0.47
CSNK1E-202ENST00000366216 ZNF710Q8N1W2 664 aa12.13□□□□□ -0.47
CSNK1E-202ENST00000366216 OR8K1Q8NGG5 319 aa12.13□□□□□ -0.47
CSNK1E-202ENST00000366216 CPLX3Q8WVH0 158 aa12.13□□□□□ -0.47
CSNK1E-202ENST00000366216 MAP7D2Q96T17 732 aa12.13□□□□□ -0.47
CSNK1E-202ENST00000366216 OSBPL6Q9BZF3 934 aa12.13□□□□□ -0.47
CSNK1E-202ENST00000366216 ABHD10Q9NUJ1 306 aa12.13□□□□□ -0.47
CSNK1E-202ENST00000366216 LUC7L2Q9Y383 392 aaKnown RBP12.13□□□□□ -0.47
CSNK1E-202ENST00000366216 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.13□□□□□ -0.47
CSNK1E-202ENST00000366216 EML5Q05BV3 1969 aa12.12□□□□□ -0.47
CSNK1E-202ENST00000366216 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.12□□□□□ -0.47
CSNK1E-202ENST00000366216 GTPBP10A4D1E9 387 aaKnown RBP12.12□□□□□ -0.47
CSNK1E-202ENST00000366216 FAM170BA6NMN3 283 aa12.12□□□□□ -0.47
CSNK1E-202ENST00000366216 RNF225M0QZC1 329 aaPredicted RBP12.12□□□□□ -0.47
CSNK1E-202ENST00000366216 CCP110O43303 1012 aa12.12□□□□□ -0.47
CSNK1E-202ENST00000366216 OFD1O75665 1012 aa12.12□□□□□ -0.47
CSNK1E-202ENST00000366216 DDHD2O94830 711 aa12.12□□□□□ -0.47
CSNK1E-202ENST00000366216 ADH1AP07327 375 aa12.12□□□□□ -0.47
CSNK1E-202ENST00000366216 HOXB3P14651 431 aaPredicted RBP12.12□□□□□ -0.47
CSNK1E-202ENST00000366216 TRIM21P19474 475 aaKnown RBP12.12□□□□□ -0.47
CSNK1E-202ENST00000366216 GLRA2P23416 452 aa12.12□□□□□ -0.47
CSNK1E-202ENST00000366216 PHKA2P46019 1235 aa12.12□□□□□ -0.47
CSNK1E-202ENST00000366216 GPC5P78333 572 aa12.12□□□□□ -0.47
CSNK1E-202ENST00000366216 ENPEPQ07075 957 aa12.12□□□□□ -0.47
CSNK1E-202ENST00000366216 KCNMA1Q12791 1236 aa12.12□□□□□ -0.47
CSNK1E-202ENST00000366216 MLF2Q15773 248 aaPredicted RBP12.12□□□□□ -0.47
CSNK1E-202ENST00000366216 EFCAB12Q6NXP0 572 aa12.12□□□□□ -0.47
CSNK1E-202ENST00000366216 GLB1LQ6UWU2 654 aa12.12□□□□□ -0.47
CSNK1E-202ENST00000366216 GET4Q7L5D6 327 aaPredicted RBP12.12□□□□□ -0.47
CSNK1E-202ENST00000366216 TMTC1Q8IUR5 882 aa12.12□□□□□ -0.47
CSNK1E-202ENST00000366216 ZNF397Q8NF99 534 aaPredicted RBP12.12□□□□□ -0.47
CSNK1E-202ENST00000366216 ASAP3Q8TDY4 903 aa12.12□□□□□ -0.47
CSNK1E-202ENST00000366216 TMEM143Q96AN5 459 aa12.12□□□□□ -0.47
CSNK1E-202ENST00000366216 PCMTD1Q96MG8 357 aaPredicted RBP12.12□□□□□ -0.47
CSNK1E-202ENST00000366216 DNAJC7Q99615 494 aa12.12□□□□□ -0.47
CSNK1E-202ENST00000366216 IKZF4Q9H2S9 585 aa12.12□□□□□ -0.47
CSNK1E-202ENST00000366216 TMEM134Q9H6X4 195 aa12.12□□□□□ -0.47
CSNK1E-202ENST00000366216 INPP5FQ9Y2H2 1132 aa12.12□□□□□ -0.47
CSNK1E-202ENST00000366216 AKAP13Q12802 2813 aa12.12□□□□□ -0.47
CSNK1E-202ENST00000366216 PHLPP2Q6ZVD8 1323 aa12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 COL4A2P08572 1712 aa12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 VWA8A3KMH1 1905 aa12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 F8W810 466 aa12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 C2CD2LO14523 706 aa12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 MAGEB2O15479 319 aa12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 EXOC3O60645 756 aa12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 LRP3O75074 770 aa12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 PAPLNO95428 1278 aa12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 EFEMP2O95967 443 aa12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 GLUD1P00367 558 aa12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 PIGRP01833 764 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms