RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 KIAA0391O15091 583 aaKnown RBP14.75□□□□□ -0.05
TNFRSF1A-202ENST00000366159 EIF3DO15371 548 aaKnown RBP eCLIP14.75□□□□□ -0.05
TNFRSF1A-202ENST00000366159 TGFB1I1O43294 461 aa14.75□□□□□ -0.05
TNFRSF1A-202ENST00000366159 GJA1P17302 382 aa14.75□□□□□ -0.05
TNFRSF1A-202ENST00000366159 PNPLA4P41247 253 aa14.75□□□□□ -0.05
TNFRSF1A-202ENST00000366159 AMPD3Q01432 767 aa14.75□□□□□ -0.05
TNFRSF1A-202ENST00000366159 PFKPQ01813 784 aa14.75□□□□□ -0.05
TNFRSF1A-202ENST00000366159 PLD1Q13393 1074 aa14.75□□□□□ -0.05
TNFRSF1A-202ENST00000366159 ANGPT1Q15389 498 aa14.75□□□□□ -0.05
TNFRSF1A-202ENST00000366159 MLF2Q15773 248 aaPredicted RBP14.75□□□□□ -0.05
TNFRSF1A-202ENST00000366159 SV2CQ496J9 727 aa14.75□□□□□ -0.05
TNFRSF1A-202ENST00000366159 RESP18Q5W5W9 173 aa14.75□□□□□ -0.05
TNFRSF1A-202ENST00000366159 GAREM2Q75VX8 874 aa14.75□□□□□ -0.05
TNFRSF1A-202ENST00000366159 SYCP3Q8IZU3 236 aa14.75□□□□□ -0.05
TNFRSF1A-202ENST00000366159 GPD1LQ8N335 351 aa14.75□□□□□ -0.05
TNFRSF1A-202ENST00000366159 SMARCD2Q92925 531 aa14.75□□□□□ -0.05
TNFRSF1A-202ENST00000366159 PSMG2Q969U7 264 aa14.75□□□□□ -0.05
TNFRSF1A-202ENST00000366159 SHDQ96IW2 340 aa14.75□□□□□ -0.05
TNFRSF1A-202ENST00000366159 MKNK1Q9BUB5 465 aa14.75□□□□□ -0.05
TNFRSF1A-202ENST00000366159 FOXQ1Q9C009 403 aa14.75□□□□□ -0.05
TNFRSF1A-202ENST00000366159 MAGEF1Q9HAY2 307 aa14.75□□□□□ -0.05
TNFRSF1A-202ENST00000366159 ZFP14Q9HCL3 533 aa14.75□□□□□ -0.05
TNFRSF1A-202ENST00000366159 PDE11AQ9HCR9 933 aa14.75□□□□□ -0.05
TNFRSF1A-202ENST00000366159 SIX4Q9UIU6 781 aa14.75□□□□□ -0.05
TNFRSF1A-202ENST00000366159 MTF2Q9Y483 593 aaPredicted RBP14.75□□□□□ -0.05
TNFRSF1A-202ENST00000366159 ASB3Q9Y575 518 aa14.75□□□□□ -0.05
TNFRSF1A-202ENST00000366159 NCANO14594 1321 aa14.75□□□□□ -0.05
TNFRSF1A-202ENST00000366159 KANSL1LA0AUZ9 987 aa14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 STK25O00506 426 aa14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 POLR2DO15514 142 aaKnown RBP14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 SOAT2O75908 522 aa14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 ITGB3P05106 788 aa14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 DCNP07585 359 aaKnown RBP14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 MYL4P12829 197 aa14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 EPHB3P54753 998 aa14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 TFAMQ00059 246 aaKnown RBP14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 DNM1Q05193 864 aaKnown RBP14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 C1QBPQ07021 282 aaKnown RBP14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 SMARCB1Q12824 385 aa14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 TEAD2Q15562 447 aa14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 FOXD4L6Q3SYB3 417 aaPredicted RBP14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 SLC39A12Q504Y0 691 aa14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 FOXD4L3Q6VB84 417 aaPredicted RBP14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 LIMS2Q7Z4I7 341 aa14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 DNAJB7Q7Z6W7 309 aaPredicted RBP14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 LRRC52Q8N7C0 313 aa14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 C2orf15Q8WU43 125 aaKnown RBP14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 CACTINQ8WUQ7 758 aaKnown RBP14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 FAM84AQ96KN4 292 aa14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 ZNF560Q96MR9 790 aa14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 OSBPL6Q9BZF3 934 aa14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 GPR88Q9GZN0 384 aa14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 ZNF334Q9HCZ1 680 aaPredicted RBP14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 TRPV5Q9NQA5 729 aa14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 GDAP2Q9NXN4 497 aa14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 ITGA11Q9UKX5 1188 aa14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 AGAP1Q9UPQ3 857 aa14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 TCHHQ07283 1943 aa14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 PTPRJQ12913 1337 aa14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 FRYLO94915 3013 aa14.74□□□□□ -0.05
TNFRSF1A-202ENST00000366159 LRRN2O75325 713 aa14.73□□□□□ -0.05
TNFRSF1A-202ENST00000366159 ATF6P18850 670 aa14.73□□□□□ -0.05
TNFRSF1A-202ENST00000366159 CASP1P29466 404 aa14.73□□□□□ -0.05
TNFRSF1A-202ENST00000366159 POLR2BP30876 1174 aaKnown RBP14.73□□□□□ -0.05
TNFRSF1A-202ENST00000366159 ALDH1A3P47895 512 aa14.73□□□□□ -0.05
TNFRSF1A-202ENST00000366159 TUFMP49411 452 aaKnown RBP14.73□□□□□ -0.05
TNFRSF1A-202ENST00000366159 FZD5Q13467 585 aa14.73□□□□□ -0.05
TNFRSF1A-202ENST00000366159 VITQ6UXI7 678 aa14.73□□□□□ -0.05
TNFRSF1A-202ENST00000366159 STXBP4Q6ZWJ1 553 aa14.73□□□□□ -0.05
TNFRSF1A-202ENST00000366159 UNC13DQ70J99 1090 aa14.73□□□□□ -0.05
TNFRSF1A-202ENST00000366159 METTL23Q86XA0 190 aa14.73□□□□□ -0.05
TNFRSF1A-202ENST00000366159 CBWD2Q8IUF1 395 aa14.73□□□□□ -0.05
TNFRSF1A-202ENST00000366159 ZNF687Q8N1G0 1237 aa14.73□□□□□ -0.05
TNFRSF1A-202ENST00000366159 THEM5Q8N1Q8 247 aa14.73□□□□□ -0.05
TNFRSF1A-202ENST00000366159 PDCL2Q8N4E4 241 aa14.73□□□□□ -0.05
TNFRSF1A-202ENST00000366159 SCFD1Q8WVM8 642 aa14.73□□□□□ -0.05
TNFRSF1A-202ENST00000366159 DNASE1L2Q92874 299 aa14.73□□□□□ -0.05
TNFRSF1A-202ENST00000366159 PKMYT1Q99640 499 aa14.73□□□□□ -0.05
TNFRSF1A-202ENST00000366159 IL21Q9HBE4 155 aa14.73□□□□□ -0.05
TNFRSF1A-202ENST00000366159 TMLHEQ9NVH6 421 aa14.73□□□□□ -0.05
TNFRSF1A-202ENST00000366159 INTS13Q9NVM9 706 aa14.73□□□□□ -0.05
TNFRSF1A-202ENST00000366159 HSPBP1Q9NZL4 362 aa14.73□□□□□ -0.05
TNFRSF1A-202ENST00000366159 CFAP45Q9UL16 551 aa14.73□□□□□ -0.05
TNFRSF1A-202ENST00000366159 L1RE1Q9UN81 338 aa14.73□□□□□ -0.05
TNFRSF1A-202ENST00000366159 ZDHHC9Q9Y397 364 aa14.73□□□□□ -0.05
TNFRSF1A-202ENST00000366159 PVALEFA0A1B0GWK0 134 aa14.72□□□□□ -0.05
TNFRSF1A-202ENST00000366159 A0A1W2PRU2 124 aa14.72□□□□□ -0.05
TNFRSF1A-202ENST00000366159 ARNTLO00327 626 aa14.72□□□□□ -0.05
TNFRSF1A-202ENST00000366159 GABRDO14764 452 aa14.72□□□□□ -0.05
TNFRSF1A-202ENST00000366159 HSP90AA1P07900 732 aaKnown RBP14.72□□□□□ -0.05
TNFRSF1A-202ENST00000366159 HAPLN1P10915 354 aaPredicted RBP14.72□□□□□ -0.05
TNFRSF1A-202ENST00000366159 PSMC3P17980 439 aa14.72□□□□□ -0.05
TNFRSF1A-202ENST00000366159 WEE1P30291 646 aa14.72□□□□□ -0.05
TNFRSF1A-202ENST00000366159 VIPR2P41587 438 aa14.72□□□□□ -0.05
TNFRSF1A-202ENST00000366159 ASIC1P78348 528 aa14.72□□□□□ -0.05
TNFRSF1A-202ENST00000366159 BMT2Q1RMZ1 405 aa14.72□□□□□ -0.05
TNFRSF1A-202ENST00000366159 FAM26FQ5R3K3 315 aa14.72□□□□□ -0.05
TNFRSF1A-202ENST00000366159 STXBP5Q5T5C0 1151 aa14.72□□□□□ -0.05
TNFRSF1A-202ENST00000366159 MFSD6LQ8IWD5 586 aa14.72□□□□□ -0.05
TNFRSF1A-202ENST00000366159 MAML2Q8IZL2 1156 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms