RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 MCM8Q9UJA3 840 aa3.18□□□□□ -1.9
RNU4-42P-201ENST00000364738 LIMCH1Q9UPQ0 1083 aa3.18□□□□□ -1.9
RNU4-42P-201ENST00000364738 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.18□□□□□ -1.9
RNU4-42P-201ENST00000364738 KAT6AQ92794 2004 aa3.18□□□□□ -1.9
RNU4-42P-201ENST00000364738 PHLDB1Q86UU1 1377 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 TARM1B6A8C7 271 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 IKBKBO14920 756 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 TP73O15350 636 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 CHEK2O96017 543 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 RPLP2P05387 115 aaKnown RBP3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 GJB1P08034 283 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 CHRM3P20309 590 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 ITGALP20701 1170 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 KELP23276 732 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 EDNRBP24530 442 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 EPHB2P29323 1055 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 CD6P30203 668 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 ZNF135P52742 658 aaPredicted RBP3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 KLF9Q13886 244 aaPredicted RBP3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 TBCCQ15814 346 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 ETFDHQ16134 617 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 ABCB5Q2M3G0 1257 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 RBM20Q5T481 1227 aaKnown RBP3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 LCE1AQ5T7P2 110 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 SLC4A10Q6U841 1118 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 PDSS2Q86YH6 399 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 CBARPQ8N350 705 aaPredicted RBP3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 PSD4Q8NDX1 1056 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 POC1BQ8TC44 478 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 OSBPL9Q96SU4 736 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 VRK1Q99986 396 aaPredicted RBP3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 CNPPD1Q9BV87 410 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 SMOC2Q9H3U7 446 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 BRD9Q9H8M2 597 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 SLAMF7Q9NQ25 335 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 NRIP3Q9NQ35 241 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 RLIMQ9NVW2 624 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 ETAA1Q9NY74 926 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 SLC5A4Q9NY91 659 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 SH3BP4Q9P0V3 963 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 PRKAB1Q9Y478 270 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 SPATA31A3Q5VYP0 1347 aa3.17□□□□□ -1.9
RNU4-42P-201ENST00000364738 KLHL33A6NCF5 533 aa3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 F2RL2O00254 374 aa3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 NXPH3O95157 252 aa3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 BMP15O95972 392 aa3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 MYBL2P10244 700 aa3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 NDUFB7P17568 137 aa3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 POU3F3P20264 500 aaPredicted RBP3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 MALP21145 153 aa3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 LPOP22079 712 aaPredicted RBP3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 PCSK6P29122 969 aa3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 CYP2C19P33261 490 aa3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 PTGER1P34995 402 aa3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 TUBA4AP68366 448 aa3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 SSBP2P81877 361 aaPredicted RBP3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 BMPR2Q13873 1038 aa3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 INAVAQ3KP66 663 aa3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 UAP1L1Q3KQV9 507 aa3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 TEDDM1Q5T9Z0 273 aa3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 TAF2Q6P1X5 1199 aa3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 CEP85Q6P2H3 762 aa3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 ZNF66Q6ZN08 573 aa3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 ZNF551Q7Z340 670 aaPredicted RBP3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 NECAB2Q7Z6G3 386 aa3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 NEK8Q86SG6 692 aa3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 KLHDC4Q8TBB5 520 aa3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 NSUN6Q8TEA1 469 aaKnown RBP3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 ATRIPQ8WXE1 791 aa3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 RPL36ALQ969Q0 106 aaKnown RBP3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 DMRTA2Q96SC8 542 aa3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 SEMA4CQ9C0C4 833 aa3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 SERTAD4Q9NUC0 356 aa3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 GNL3LQ9NVN8 582 aaKnown RBP3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 SIDT1Q9NXL6 827 aaKnown RBP3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 CFAP97Q9P2B7 532 aa3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 USP35Q9P2H5 1018 aa3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 DKK3Q9UBP4 350 aa3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 PCDHB1Q9Y5F3 818 aa3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 MRFAP1Q9Y605 127 aa3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 CFAP20Q9Y6A4 193 aaKnown RBP3.16□□□□□ -1.9
RNU4-42P-201ENST00000364738 SETD1BQ9UPS6 1966 aaKnown RBP3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 NT5C1B-RDH14C9J2C7 533 aa3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 SMIM22K7EJ46 135 aa3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 PCDHGA12O60330 932 aa3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 VPS4BO75351 444 aa3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 SOAT2O75908 522 aa3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 IGKV2-30P06310 120 aa3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 RARBP10826 455 aa3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 CERS1P27544 350 aa3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 SMARCA1P28370 1054 aa3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 MPGP29372 298 aa3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 HABP2Q14520 560 aaPredicted RBP3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 KHDC1Q4VXA5 237 aaKnown RBP3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 MORN5Q5VZ52 161 aa3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 SLC29A4Q7RTT9 530 aa3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 ZNF804AQ7Z570 1209 aa3.15□□□□□ -1.91
RNU4-42P-201ENST00000364738 YTHDF3Q7Z739 585 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms