RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 ALDH9A1P49189 494 aa3.09□□□□□ -1.91
RNU6-238P-201ENST00000363313 THBS3P49746 956 aa3.09□□□□□ -1.91
RNU6-238P-201ENST00000363313 KRTAP5-1Q6L8H4 278 aa3.09□□□□□ -1.91
RNU6-238P-201ENST00000363313 FAM9AQ8IZU1 332 aaPredicted RBP3.09□□□□□ -1.91
RNU6-238P-201ENST00000363313 C8orf58Q8NAV2 365 aa3.09□□□□□ -1.91
RNU6-238P-201ENST00000363313 CLRN3Q8NCR9 226 aa3.09□□□□□ -1.91
RNU6-238P-201ENST00000363313 C16orf52Q8NHV5 167 aa3.09□□□□□ -1.91
RNU6-238P-201ENST00000363313 CCHCR1Q8TD31 782 aa3.09□□□□□ -1.91
RNU6-238P-201ENST00000363313 USP7Q93009 1102 aa3.09□□□□□ -1.91
RNU6-238P-201ENST00000363313 COQ8BQ96D53 544 aa3.09□□□□□ -1.91
RNU6-238P-201ENST00000363313 IFT22Q9H7X7 185 aa3.09□□□□□ -1.91
RNU6-238P-201ENST00000363313 SH3BP4Q9P0V3 963 aa3.09□□□□□ -1.91
RNU6-238P-201ENST00000363313 MAPRE3Q9UPY8 281 aa3.09□□□□□ -1.91
RNU6-238P-201ENST00000363313 SH2B3Q9UQQ2 575 aa3.09□□□□□ -1.91
RNU6-238P-201ENST00000363313 CDYLQ9Y232 598 aa3.09□□□□□ -1.91
RNU6-238P-201ENST00000363313 RUVBL1Q9Y265 456 aaKnown RBP3.09□□□□□ -1.91
RNU6-238P-201ENST00000363313 NR2E3Q9Y5X4 410 aa3.09□□□□□ -1.91
RNU6-238P-201ENST00000363313 KCNU1A8MYU2 1149 aa3.08□□□□□ -1.92
RNU6-238P-201ENST00000363313 E9PSI1 815 aa3.08□□□□□ -1.92
RNU6-238P-201ENST00000363313 ZNF213O14771 459 aa3.08□□□□□ -1.92
RNU6-238P-201ENST00000363313 SLC6A4P31645 630 aa3.08□□□□□ -1.92
RNU6-238P-201ENST00000363313 HOXA4Q00056 320 aaPredicted RBP3.08□□□□□ -1.92
RNU6-238P-201ENST00000363313 HYAL1Q12794 435 aa3.08□□□□□ -1.92
RNU6-238P-201ENST00000363313 ZNF618Q5T7W0 954 aa3.08□□□□□ -1.92
RNU6-238P-201ENST00000363313 ZNF365Q70YC5 407 aa3.08□□□□□ -1.92
RNU6-238P-201ENST00000363313 ZGPATQ8N5A5 531 aaKnown RBP3.08□□□□□ -1.92
RNU6-238P-201ENST00000363313 APPBP2Q92624 585 aa3.08□□□□□ -1.92
RNU6-238P-201ENST00000363313 MFSD3Q96ES6 412 aa3.08□□□□□ -1.92
RNU6-238P-201ENST00000363313 KLHL32Q96NJ5 620 aa3.08□□□□□ -1.92
RNU6-238P-201ENST00000363313 ASB2Q96Q27 587 aa3.08□□□□□ -1.92
RNU6-238P-201ENST00000363313 SMOQ99835 787 aa3.08□□□□□ -1.92
RNU6-238P-201ENST00000363313 C7orf25Q9BPX7 421 aa3.08□□□□□ -1.92
RNU6-238P-201ENST00000363313 KANSL2Q9H9L4 492 aa3.08□□□□□ -1.92
RNU6-238P-201ENST00000363313 DMRT3Q9NQL9 472 aa3.08□□□□□ -1.92
RNU6-238P-201ENST00000363313 GOLGA8AA7E2F4 631 aa3.07□□□□□ -1.92
RNU6-238P-201ENST00000363313 F5H697 171 aa3.07□□□□□ -1.92
RNU6-238P-201ENST00000363313 GRM6O15303 877 aa3.07□□□□□ -1.92
RNU6-238P-201ENST00000363313 NHLRC4P0CG21 123 aaPredicted RBP3.07□□□□□ -1.92
RNU6-238P-201ENST00000363313 JUPP14923 745 aa3.07□□□□□ -1.92
RNU6-238P-201ENST00000363313 SCP2P22307 547 aa3.07□□□□□ -1.92
RNU6-238P-201ENST00000363313 PCSK6P29122 969 aa3.07□□□□□ -1.92
RNU6-238P-201ENST00000363313 CCT2P78371 535 aaKnown RBP3.07□□□□□ -1.92
RNU6-238P-201ENST00000363313 ERV3-1Q14264 604 aa3.07□□□□□ -1.92
RNU6-238P-201ENST00000363313 IRF2BP2Q7Z5L9 587 aa3.07□□□□□ -1.92
RNU6-238P-201ENST00000363313 DTX2Q86UW9 622 aa3.07□□□□□ -1.92
RNU6-238P-201ENST00000363313 PDSS2Q86YH6 399 aa3.07□□□□□ -1.92
RNU6-238P-201ENST00000363313 NANOGP1Q8N7R0 232 aa3.07□□□□□ -1.92
RNU6-238P-201ENST00000363313 SSH1Q8WYL5 1049 aa3.07□□□□□ -1.92
RNU6-238P-201ENST00000363313 LRIG1Q96JA1 1093 aa3.07□□□□□ -1.92
RNU6-238P-201ENST00000363313 TRIB1Q96RU8 372 aa3.07□□□□□ -1.92
RNU6-238P-201ENST00000363313 TTC1Q99614 292 aa3.07□□□□□ -1.92
RNU6-238P-201ENST00000363313 TPSD1Q9BZJ3 242 aa3.07□□□□□ -1.92
RNU6-238P-201ENST00000363313 APOBEC2Q9Y235 224 aaKnown RBP3.07□□□□□ -1.92
RNU6-238P-201ENST00000363313 WDR17Q8IZU2 1322 aa3.07□□□□□ -1.92
RNU6-238P-201ENST00000363313 PRSS44E7EML9 344 aa3.06□□□□□ -1.92
RNU6-238P-201ENST00000363313 H7C1Q1 480 aa3.06□□□□□ -1.92
RNU6-238P-201ENST00000363313 CHRM5P08912 532 aaPredicted RBP3.06□□□□□ -1.92
RNU6-238P-201ENST00000363313 NDUFV1P49821 464 aa3.06□□□□□ -1.92
RNU6-238P-201ENST00000363313 MC2RQ01718 297 aa3.06□□□□□ -1.92
RNU6-238P-201ENST00000363313 SEMA3AQ14563 771 aa3.06□□□□□ -1.92
RNU6-238P-201ENST00000363313 BMS1Q14692 1282 aaKnown RBP3.06□□□□□ -1.92
RNU6-238P-201ENST00000363313 NPY5RQ15761 445 aa3.06□□□□□ -1.92
RNU6-238P-201ENST00000363313 TBCCQ15814 346 aa3.06□□□□□ -1.92
RNU6-238P-201ENST00000363313 TAPT1Q6NXT6 567 aa3.06□□□□□ -1.92
RNU6-238P-201ENST00000363313 MIS18BP1Q6P0N0 1132 aa3.06□□□□□ -1.92
RNU6-238P-201ENST00000363313 MTHFD1LQ6UB35 978 aa3.06□□□□□ -1.92
RNU6-238P-201ENST00000363313 C9orf47Q6ZRZ4 202 aa3.06□□□□□ -1.92
RNU6-238P-201ENST00000363313 FAM109AQ8N4B1 249 aa3.06□□□□□ -1.92
RNU6-238P-201ENST00000363313 PUS7Q96PZ0 661 aaKnown RBP3.06□□□□□ -1.92
RNU6-238P-201ENST00000363313 FAM118BQ9BPY3 351 aa3.06□□□□□ -1.92
RNU6-238P-201ENST00000363313 PACSIN1Q9BY11 444 aa3.06□□□□□ -1.92
RNU6-238P-201ENST00000363313 ACTRT3Q9BYD9 372 aa3.06□□□□□ -1.92
RNU6-238P-201ENST00000363313 QRSL1Q9H0R6 528 aaKnown RBP3.06□□□□□ -1.92
RNU6-238P-201ENST00000363313 CCDC9Q9Y3X0 531 aaKnown RBP3.06□□□□□ -1.92
RNU6-238P-201ENST00000363313 LY6G6EA0A0G2JKS1 128 aa3.05□□□□□ -1.92
RNU6-238P-201ENST00000363313 QSOX1O00391 747 aa3.05□□□□□ -1.92
RNU6-238P-201ENST00000363313 SGTAO43765 313 aa3.05□□□□□ -1.92
RNU6-238P-201ENST00000363313 TLR5O60602 858 aa3.05□□□□□ -1.92
RNU6-238P-201ENST00000363313 CHEK2O96017 543 aa3.05□□□□□ -1.92
RNU6-238P-201ENST00000363313 RHOP08100 348 aa3.05□□□□□ -1.92
RNU6-238P-201ENST00000363313 MTNR1BP49286 362 aa3.05□□□□□ -1.92
RNU6-238P-201ENST00000363313 EEFSECP57772 596 aaKnown RBP3.05□□□□□ -1.92
RNU6-238P-201ENST00000363313 CDC42EP1Q00587 391 aa3.05□□□□□ -1.92
RNU6-238P-201ENST00000363313 SRSF1Q07955 248 aaKnown RBP eCLIP3.05□□□□□ -1.92
RNU6-238P-201ENST00000363313 RAB39AQ14964 217 aa3.05□□□□□ -1.92
RNU6-238P-201ENST00000363313 KRTAP27-1Q3LI81 207 aa3.05□□□□□ -1.92
RNU6-238P-201ENST00000363313 Q6ZTC4 211 aa3.05□□□□□ -1.92
RNU6-238P-201ENST00000363313 CHSY1Q86X52 802 aa3.05□□□□□ -1.92
RNU6-238P-201ENST00000363313 ADHFE1Q8IWW8 467 aa3.05□□□□□ -1.92
RNU6-238P-201ENST00000363313 DHX37Q8IY37 1157 aaKnown RBP3.05□□□□□ -1.92
RNU6-238P-201ENST00000363313 DCBLD1Q8N8Z6 715 aa3.05□□□□□ -1.92
RNU6-238P-201ENST00000363313 LEO1Q8WVC0 666 aaPredicted RBP3.05□□□□□ -1.92
RNU6-238P-201ENST00000363313 SCAMP4Q969E2 229 aa3.05□□□□□ -1.92
RNU6-238P-201ENST00000363313 FAM136AQ96C01 138 aa3.05□□□□□ -1.92
RNU6-238P-201ENST00000363313 C5orf34Q96MH7 638 aa3.05□□□□□ -1.92
RNU6-238P-201ENST00000363313 PPP1R10Q96QC0 940 aaKnown RBP3.05□□□□□ -1.92
RNU6-238P-201ENST00000363313 IMPG2Q9BZV3 1241 aa3.05□□□□□ -1.92
RNU6-238P-201ENST00000363313 RLIMQ9NVW2 624 aa3.05□□□□□ -1.92
RNU6-238P-201ENST00000363313 TRNAU1APQ9NX07 287 aaKnown RBP3.05□□□□□ -1.92
RNU6-238P-201ENST00000363313 CD8B2A6NJW9 211 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms