RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 RNF44Q7L0R7 432 aa4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 SMAP1Q8IYB5 467 aaPredicted RBP4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 ELOA2Q8IYF1 753 aaPredicted RBP4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 TXLNBQ8N3L3 684 aa4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 VGLL2Q8N8G2 317 aa4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 ZNF527Q8NB42 609 aa4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 SPATA5Q8NB90 893 aa4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 RNF169Q8NCN4 708 aa4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 SLC17A8Q8NDX2 589 aa4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 DNERQ8NFT8 737 aa4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 NUP133Q8WUM0 1156 aa4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 TMEM176AQ96HP8 235 aa4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 CNPPD1Q9BV87 410 aa4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 IMPG2Q9BZV3 1241 aa4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 SPON1Q9HCB6 807 aa4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 TM7SF3Q9NS93 570 aa4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 USP40Q9NVE5 1235 aa4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 MAN2B2Q9Y2E5 1009 aa4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 M0QYG6 137 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 MYO1CO00159 1063 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 TLR5O60602 858 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 PRSS23O95084 383 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 CSTBP04080 98 aaKnown RBP4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 A1BGP04217 495 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 ITGB1P05556 798 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 CYP2C9P11712 490 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 XRCC6P12956 609 aaKnown RBP eCLIP4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 PAX3P23760 479 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 VIPR2P41587 438 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 SLFN5Q08AF3 891 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 FOXL1Q12952 345 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 ELAVL1Q15717 326 aaKnown RBP4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 CCDC38Q502W7 563 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 NOMO2Q5JPE7 1267 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 METRNLQ641Q3 311 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 NAIF1Q69YI7 327 aaPredicted RBP4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 KRT28Q7Z3Y7 464 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 GAS2L3Q86XJ1 694 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 SYT12Q8IV01 421 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 YAF2Q8IY57 180 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 CPXCR1Q8N123 301 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 MPP5Q8N3R9 675 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 PDPRQ8NCN5 879 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 FAM46DQ8NEK8 389 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 ZNF384Q8TF68 577 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 IPCEF1Q8WWN9 437 aaPredicted RBP4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 SPSB4Q96A44 273 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 GNRHR2Q96P88 292 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 OR14A2Q96R54 314 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 ISCA1Q9BUE6 129 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 STK31Q9BXU1 1019 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 DHX36Q9H2U1 1008 aaKnown RBP4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 XPNPEP3Q9NQH7 507 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 ETAA1Q9NY74 926 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 PPP4R1LQ9P1A2 415 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 POGKQ9P215 609 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 HESX1Q9UBX0 185 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 ZNF212Q9UDV6 495 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 CAPN11Q9UMQ6 739 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 MAGED2Q9UNF1 606 aaPredicted RBP4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 DGKBQ9Y6T7 804 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 DUSP10Q9Y6W6 482 aa4.49□□□□□ -1.69
RNU6-28P-201ENST00000362378 KCNQ3O43525 872 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 TRIM13O60858 407 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 SKAP2O75563 359 aaPredicted RBP4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 KIF20AO95235 890 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 FCER1AP12319 257 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 BTF3P20290 206 aaKnown RBP4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 IL1R2P27930 398 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 PDIA3P30101 505 aaKnown RBP4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 MSX2P35548 267 aaPredicted RBP4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 CHN2P52757 468 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 FSTL1Q12841 308 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 ELF2Q15723 593 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 ZACNQ401N2 412 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 C1QL3Q5VWW1 255 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 TCTN3Q6NUS6 607 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 LDHAL6AQ6ZMR3 332 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 HTR3DQ70Z44 454 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 CACNA2D3Q8IZS8 1091 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 FUKQ8N0W3 1084 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 CFAP52Q8N1V2 620 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 ANKRD35Q8N283 1001 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 D2HGDHQ8N465 521 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 MYCT1Q8N699 235 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 SYT8Q8NBV8 401 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 CCT6BQ92526 530 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 MIEF2Q96C03 454 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 SCLT1Q96NL6 688 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 TOX2Q96NM4 488 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 MOGAT1Q96PD6 335 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 HEPHQ9BQS7 1158 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 MESP1Q9BRJ9 268 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 TLR10Q9BXR5 811 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 MS4A7Q9GZW8 240 aaPredicted RBP4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 NECTIN3Q9NQS3 549 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 MID2Q9UJV3 735 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 ITGB1BP2Q9UKP3 347 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 SLC39A10Q9ULF5 831 aa4.48□□□□□ -1.69
RNU6-28P-201ENST00000362378 A0A087WZ62 844 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms