RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 ZNF197O14709 1029 aa19.46■□□□□ 0.71
CLIP2-202ENST00000361545 PRPF4O43172 522 aaKnown RBP eCLIP19.46■□□□□ 0.715e-7■■□□□ 13.3
CLIP2-202ENST00000361545 PPP2R2AP63151 447 aa19.46■□□□□ 0.71
CLIP2-202ENST00000361545 SMYD3Q9H7B4 428 aa19.46■□□□□ 0.71
CLIP2-202ENST00000361545 IQGAP1P46940 1657 aa19.46■□□□□ 0.71
CLIP2-202ENST00000361545 PDK1Q15118 436 aa19.46■□□□□ 0.71
CLIP2-202ENST00000361545 E4F1Q66K89 784 aaPredicted RBP19.46■□□□□ 0.71
CLIP2-202ENST00000361545 TGS1Q96RS0 853 aaKnown RBP19.46■□□□□ 0.71
CLIP2-202ENST00000361545 MRPL46Q9H2W6 279 aaKnown RBP19.46■□□□□ 0.71
CLIP2-202ENST00000361545 RSAD1Q9HA92 442 aa19.46■□□□□ 0.71
CLIP2-202ENST00000361545 FOXN3O00409 490 aaPredicted RBP19.46■□□□□ 0.71
CLIP2-202ENST00000361545 SLC26A2P50443 739 aa19.46■□□□□ 0.71
CLIP2-202ENST00000361545 CNTN2Q02246 1040 aa19.46■□□□□ 0.71
CLIP2-202ENST00000361545 LAMTOR4Q0VGL1 99 aa19.46■□□□□ 0.71
CLIP2-202ENST00000361545 PKN1Q16512 942 aa19.46■□□□□ 0.71
CLIP2-202ENST00000361545 DNAJB3Q8WWF6 145 aa19.46■□□□□ 0.71
CLIP2-202ENST00000361545 PTPRN2Q92932 1015 aa19.46■□□□□ 0.71
CLIP2-202ENST00000361545 LATS2Q9NRM7 1088 aa19.46■□□□□ 0.71
CLIP2-202ENST00000361545 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.46■□□□□ 0.71
CLIP2-202ENST00000361545 FER1L4A9Z1Z3 1794 aa19.46■□□□□ 0.71
CLIP2-202ENST00000361545 RAP1GAPP47736 663 aa19.46■□□□□ 0.71
CLIP2-202ENST00000361545 PDAP1Q13442 181 aaKnown RBP19.46■□□□□ 0.71
CLIP2-202ENST00000361545 TRIM65Q6PJ69 517 aa19.46■□□□□ 0.71
CLIP2-202ENST00000361545 ENGASEQ8NFI3 743 aa19.46■□□□□ 0.71
CLIP2-202ENST00000361545 CCDC138Q96M89 665 aa19.46■□□□□ 0.71
CLIP2-202ENST00000361545 TFR2Q9UP52 801 aa19.46■□□□□ 0.71
CLIP2-202ENST00000361545 NDUFS3O75489 264 aa19.46■□□□□ 0.71
CLIP2-202ENST00000361545 THP07101 528 aa19.46■□□□□ 0.71
CLIP2-202ENST00000361545 CDH18Q13634 790 aa19.46■□□□□ 0.71
CLIP2-202ENST00000361545 PTK2BQ14289 1009 aa19.46■□□□□ 0.71
CLIP2-202ENST00000361545 C4orf19Q8IY42 314 aa19.46■□□□□ 0.71
CLIP2-202ENST00000361545 IDI2Q9BXS1 227 aa19.46■□□□□ 0.71
CLIP2-202ENST00000361545 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.46■□□□□ 0.71
CLIP2-202ENST00000361545 DNAJB2P25686 324 aa19.45■□□□□ 0.7
CLIP2-202ENST00000361545 CCZ1BP86790 482 aa19.45■□□□□ 0.7
CLIP2-202ENST00000361545 CCZ1P86791 482 aaPredicted RBP19.45■□□□□ 0.7
CLIP2-202ENST00000361545 CTXN3Q4LDR2 81 aa19.45■□□□□ 0.7
CLIP2-202ENST00000361545 RRP15Q9Y3B9 282 aaKnown RBP19.45■□□□□ 0.7
CLIP2-202ENST00000361545 CASTOR2A6NHX0 329 aa19.45■□□□□ 0.7
CLIP2-202ENST00000361545 H0Y626 953 aa19.45■□□□□ 0.7
CLIP2-202ENST00000361545 GYG2O15488 501 aa19.45■□□□□ 0.7
CLIP2-202ENST00000361545 ZNF189O75820 626 aaPredicted RBP19.45■□□□□ 0.7
CLIP2-202ENST00000361545 SGPL1O95470 568 aa19.45■□□□□ 0.7
CLIP2-202ENST00000361545 SERPIND1P05546 499 aa19.45■□□□□ 0.7
CLIP2-202ENST00000361545 RBP3P10745 1247 aa19.45■□□□□ 0.7
CLIP2-202ENST00000361545 PSMC6P62333 389 aa19.45■□□□□ 0.7
CLIP2-202ENST00000361545 CDR2Q01850 454 aa19.45■□□□□ 0.7
CLIP2-202ENST00000361545 ZFP69BQ9UJL9 534 aa19.45■□□□□ 0.7
CLIP2-202ENST00000361545 GRIK4Q16099 956 aa19.45■□□□□ 0.7
CLIP2-202ENST00000361545 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.45■□□□□ 0.7
CLIP2-202ENST00000361545 MAP2P11137 1827 aaKnown RBP19.45■□□□□ 0.7
CLIP2-202ENST00000361545 MGEA5O60502 916 aa19.45■□□□□ 0.7
CLIP2-202ENST00000361545 CD44P16070 742 aaKnown RBP19.45■□□□□ 0.7
CLIP2-202ENST00000361545 EEF1B2P24534 225 aaKnown RBP19.45■□□□□ 0.7
CLIP2-202ENST00000361545 HOXA10P31260 410 aaPredicted RBP19.45■□□□□ 0.7
CLIP2-202ENST00000361545 ADCK2Q7Z695 626 aa19.45■□□□□ 0.7
CLIP2-202ENST00000361545 MFN1Q8IWA4 741 aa19.45■□□□□ 0.7
CLIP2-202ENST00000361545 ADGRF2Q8IZF7 708 aa19.45■□□□□ 0.7
CLIP2-202ENST00000361545 RPRD1AQ96P16 312 aaPredicted RBP19.45■□□□□ 0.7
CLIP2-202ENST00000361545 WDCPQ9H6R7 721 aa19.45■□□□□ 0.7
CLIP2-202ENST00000361545 TRIM33Q9UPN9 1127 aa19.45■□□□□ 0.7
CLIP2-202ENST00000361545 NEU2Q9Y3R4 380 aa19.45■□□□□ 0.7
CLIP2-202ENST00000361545 A0A1W2PQJ5 194 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 MYO1DO94832 1006 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 HIST1H2AGP0C0S8 130 aaPredicted RBP19.44■□□□□ 0.7
CLIP2-202ENST00000361545 HIST1H2ADP20671 130 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 PON1P27169 355 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 MAP4P27816 1152 aaKnown RBP19.44■□□□□ 0.7
CLIP2-202ENST00000361545 IFNA8P32881 189 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 CD302Q8IX05 232 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 HIST1H2AHQ96KK5 128 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 PPP1R36Q96LQ0 422 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 HIST1H2AJQ99878 128 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 H2AFJQ9BTM1 129 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 THAP2Q9H0W7 228 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 ARHGEF38Q9NXL2 777 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 KCNJ1P48048 391 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 VGLL4Q14135 290 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 TRAPPC12Q8WVT3 735 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 TPX2Q9ULW0 747 aaKnown RBP19.44■□□□□ 0.7
CLIP2-202ENST00000361545 SLIT1O75093 1534 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 H7C4K7 107 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 NKRFO15226 690 aaKnown RBP eCLIP19.44■□□□□ 0.76e-8■■■□□ 14.8
CLIP2-202ENST00000361545 STRNO43815 780 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 MUTP22033 750 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 GCKP35557 465 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 ALDH5A1P51649 535 aaPredicted RBP19.44■□□□□ 0.7
CLIP2-202ENST00000361545 MTHFD1LQ6UB35 978 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 RAB42Q8N4Z0 105 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 ATP8B4Q8TF62 1192 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 FBXO32Q969P5 355 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 PDLIM2Q96JY6 352 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 VPS33BQ9H267 617 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 DOLKQ9UPQ8 538 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 CHMP2BQ9UQN3 213 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 PSMD3O43242 534 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 RPSAP08865 295 aaKnown RBP19.44■□□□□ 0.7
CLIP2-202ENST00000361545 NTRK3Q16288 839 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 SDE2Q6IQ49 451 aa19.44■□□□□ 0.7
CLIP2-202ENST00000361545 TRIM17Q9Y577 477 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms