RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 CD58P19256 250 aa17.12■□□□□ 0.33
IFT140-201ENST00000361339 SSR1P43307 286 aaKnown RBP17.12■□□□□ 0.33
IFT140-201ENST00000361339 TCEAL1Q15170 157 aa17.12■□□□□ 0.33
IFT140-201ENST00000361339 SRRM1Q8IYB3 904 aaKnown RBP17.12■□□□□ 0.33
IFT140-201ENST00000361339 MCPH1Q8NEM0 835 aa17.12■□□□□ 0.33
IFT140-201ENST00000361339 SPOCK2Q92563 424 aa17.12■□□□□ 0.33
IFT140-201ENST00000361339 ZNF302Q9NR11 478 aa17.12■□□□□ 0.33
IFT140-201ENST00000361339 RBAKQ9NYW8 714 aaPredicted RBP17.12■□□□□ 0.33
IFT140-201ENST00000361339 MTRF1LQ9UGC7 380 aaKnown RBP17.12■□□□□ 0.33
IFT140-201ENST00000361339 PI4K2BG5E9Z4 385 aa17.11■□□□□ 0.33
IFT140-201ENST00000361339 EXTL3O43909 919 aa17.11■□□□□ 0.33
IFT140-201ENST00000361339 NUDT17P0C025 328 aa17.11■□□□□ 0.33
IFT140-201ENST00000361339 BRAFP15056 766 aa17.11■□□□□ 0.33
IFT140-201ENST00000361339 RPS6KA3P51812 740 aa17.11■□□□□ 0.33
IFT140-201ENST00000361339 GALNTL6Q49A17 601 aa17.11■□□□□ 0.33
IFT140-201ENST00000361339 KLRG1Q96E93 195 aa17.11■□□□□ 0.33
IFT140-201ENST00000361339 BTBD7Q9P203 1132 aa17.11■□□□□ 0.33
IFT140-201ENST00000361339 ZNF112Q9UJU3 913 aa17.11■□□□□ 0.33
IFT140-201ENST00000361339 PCDHB4Q9Y5E5 795 aa17.11■□□□□ 0.33
IFT140-201ENST00000361339 ARID2Q68CP9 1835 aa17.11■□□□□ 0.33
IFT140-201ENST00000361339 LUC7L3O95232 432 aaKnown RBP17.11■□□□□ 0.33
IFT140-201ENST00000361339 PYGLP06737 847 aa17.11■□□□□ 0.33
IFT140-201ENST00000361339 GM2AP17900 193 aa17.11■□□□□ 0.33
IFT140-201ENST00000361339 GBP1P32455 592 aa17.11■□□□□ 0.33
IFT140-201ENST00000361339 SLMAPQ14BN4 828 aa17.11■□□□□ 0.33
IFT140-201ENST00000361339 ECHDC2Q86YB7 292 aa17.11■□□□□ 0.33
IFT140-201ENST00000361339 LMNTD2Q8IXW0 634 aa17.11■□□□□ 0.33
IFT140-201ENST00000361339 ANKRD35Q8N283 1001 aa17.11■□□□□ 0.33
IFT140-201ENST00000361339 RASAL2Q9UJF2 1139 aa17.11■□□□□ 0.33
IFT140-201ENST00000361339 AFG3L2Q9Y4W6 797 aa17.11■□□□□ 0.33
IFT140-201ENST00000361339 PHIPQ8WWQ0 1821 aa17.11■□□□□ 0.33
IFT140-201ENST00000361339 RALAP11233 206 aa17.1■□□□□ 0.33
IFT140-201ENST00000361339 GARTP22102 1010 aa17.1■□□□□ 0.33
IFT140-201ENST00000361339 RANBP1P43487 201 aa17.1■□□□□ 0.33
IFT140-201ENST00000361339 SNRPFP62306 86 aaKnown RBP17.1■□□□□ 0.33
IFT140-201ENST00000361339 GCNT1Q02742 428 aa17.1■□□□□ 0.33
IFT140-201ENST00000361339 XKR3Q5GH77 459 aa17.1■□□□□ 0.33
IFT140-201ENST00000361339 MSTO1Q9BUK6 570 aa17.1■□□□□ 0.33
IFT140-201ENST00000361339 VPS33BQ9H267 617 aa17.1■□□□□ 0.33
IFT140-201ENST00000361339 UVRAGQ9P2Y5 699 aa17.1■□□□□ 0.33
IFT140-201ENST00000361339 SSC5DA1L4H1 1573 aa17.1■□□□□ 0.33
IFT140-201ENST00000361339 LCTP09848 1927 aa17.1■□□□□ 0.33
IFT140-201ENST00000361339 MYH9P35579 1960 aaKnown RBP17.1■□□□□ 0.33
IFT140-201ENST00000361339 K7ERI5 159 aa17.1■□□□□ 0.33
IFT140-201ENST00000361339 CBX6O95503 412 aa17.1■□□□□ 0.33
IFT140-201ENST00000361339 ITGBL1O95965 494 aaPredicted RBP17.1■□□□□ 0.33
IFT140-201ENST00000361339 OATP04181 439 aa17.1■□□□□ 0.33
IFT140-201ENST00000361339 UBA1P22314 1058 aaKnown RBP17.1■□□□□ 0.33
IFT140-201ENST00000361339 EPHB2P29323 1055 aa17.1■□□□□ 0.33
IFT140-201ENST00000361339 RPL7AP62424 266 aaKnown RBP17.1■□□□□ 0.33
IFT140-201ENST00000361339 MUM1Q2TAK8 710 aa17.1■□□□□ 0.33
IFT140-201ENST00000361339 RFX8Q6ZV50 586 aa17.1■□□□□ 0.33
IFT140-201ENST00000361339 LRRC71Q8N4P6 559 aa17.1■□□□□ 0.33
IFT140-201ENST00000361339 DEPTORQ8TB45 409 aa17.1■□□□□ 0.33
IFT140-201ENST00000361339 DDX27Q96GQ7 796 aaKnown RBP17.1■□□□□ 0.33
IFT140-201ENST00000361339 MYLK2Q9H1R3 596 aa17.1■□□□□ 0.33
IFT140-201ENST00000361339 RXFP1Q9HBX9 757 aa17.1■□□□□ 0.33
IFT140-201ENST00000361339 ASIC3Q9UHC3 531 aa17.1■□□□□ 0.33
IFT140-201ENST00000361339 SPAG7O75391 227 aa17.1■□□□□ 0.33
IFT140-201ENST00000361339 OSTNP61366 133 aa17.1■□□□□ 0.33
IFT140-201ENST00000361339 STRN3Q13033 797 aa17.1■□□□□ 0.33
IFT140-201ENST00000361339 CAPSQ13938 189 aa17.1■□□□□ 0.33
IFT140-201ENST00000361339 PSMD6Q15008 389 aa17.1■□□□□ 0.33
IFT140-201ENST00000361339 CYP1B1Q16678 543 aa17.1■□□□□ 0.33
IFT140-201ENST00000361339 LY6KQ17RY6 165 aa17.1■□□□□ 0.33
IFT140-201ENST00000361339 DCAF15Q66K64 600 aa17.1■□□□□ 0.33
IFT140-201ENST00000361339 ECEL1O95672 775 aa17.09■□□□□ 0.33
IFT140-201ENST00000361339 KRT10P13645 584 aa17.09■□□□□ 0.33
IFT140-201ENST00000361339 BAG6P46379 1132 aa17.09■□□□□ 0.33
IFT140-201ENST00000361339 NSFP46459 744 aaKnown RBP17.09■□□□□ 0.33
IFT140-201ENST00000361339 KYNUQ16719 465 aa17.09■□□□□ 0.33
IFT140-201ENST00000361339 MON1BQ7L1V2 547 aa17.09■□□□□ 0.33
IFT140-201ENST00000361339 GLIS1Q8NBF1 620 aa17.09■□□□□ 0.33
IFT140-201ENST00000361339 RDM1Q8NG50 284 aa17.09■□□□□ 0.33
IFT140-201ENST00000361339 TRAPPC12Q8WVT3 735 aa17.09■□□□□ 0.33
IFT140-201ENST00000361339 ART4Q93070 314 aa17.09■□□□□ 0.33
IFT140-201ENST00000361339 PITPNM3Q9BZ71 974 aa17.09■□□□□ 0.33
IFT140-201ENST00000361339 PORCNQ9H237 461 aa17.09■□□□□ 0.33
IFT140-201ENST00000361339 AS3MTQ9HBK9 375 aa17.09■□□□□ 0.33
IFT140-201ENST00000361339 DOCK1Q14185 1865 aa17.09■□□□□ 0.33
IFT140-201ENST00000361339 GSTTP1A0A1W2PQM5 241 aa17.09■□□□□ 0.33
IFT140-201ENST00000361339 CUL2Q13617 745 aa17.09■□□□□ 0.33
IFT140-201ENST00000361339 WDR44Q5JSH3 913 aa17.09■□□□□ 0.33
IFT140-201ENST00000361339 TXNRD3NBQ6F5E7 133 aa17.09■□□□□ 0.33
IFT140-201ENST00000361339 VSTM1Q6UX27 236 aa17.09■□□□□ 0.33
IFT140-201ENST00000361339 SCARA5Q6ZMJ2 495 aa17.09■□□□□ 0.33
IFT140-201ENST00000361339 CYP4X1Q8N118 509 aa17.09■□□□□ 0.33
IFT140-201ENST00000361339 ANKLE1Q8NAG6 615 aa17.09■□□□□ 0.33
IFT140-201ENST00000361339 CDC42EP4Q9H3Q1 356 aaKnown RBP17.09■□□□□ 0.33
IFT140-201ENST00000361339 MTUS1Q9ULD2 1270 aa17.09■□□□□ 0.33
IFT140-201ENST00000361339 PCDHB2Q9Y5E7 798 aa17.09■□□□□ 0.33
IFT140-201ENST00000361339 DNAH12Q6ZR08 3092 aa17.09■□□□□ 0.33
IFT140-201ENST00000361339 FSCN2O14926 492 aa17.08■□□□□ 0.33
IFT140-201ENST00000361339 THAP12O43422 761 aa17.08■□□□□ 0.33
IFT140-201ENST00000361339 SRGAP2CP0DJJ0 459 aa17.08■□□□□ 0.33
IFT140-201ENST00000361339 GNA15P30679 374 aa17.08■□□□□ 0.33
IFT140-201ENST00000361339 MCCD1P59942 119 aaPredicted RBP17.08■□□□□ 0.33
IFT140-201ENST00000361339 USP4Q13107 963 aa17.08■□□□□ 0.33
IFT140-201ENST00000361339 DNAJC3Q13217 504 aa17.08■□□□□ 0.33
IFT140-201ENST00000361339 ORC1Q13415 861 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms