RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 CLEC16AQ2KHT3 1053 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 C10orf76Q5T2E6 689 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 CYP4A22Q5TCH4 519 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 ZNF280DQ6N043 979 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 MMS22LQ6ZRQ5 1243 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 C7orf31Q8N865 590 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 CCDC102AQ96A19 550 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 TWNKQ96RR1 684 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 KRT12Q99456 494 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 IMPG2Q9BZV3 1241 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 ISCUQ9H1K1 167 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 ABCB6Q9NP58 842 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 CNOT8Q9UFF9 292 aaKnown RBP5.42□□□□□ -1.54
ATXN3-202ENST00000359366 TUBGCP4Q9UGJ1 667 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 AGAP1Q9UPQ3 857 aa5.42□□□□□ -1.54
ATXN3-202ENST00000359366 PIN4Q9Y237 131 aaKnown RBP5.42□□□□□ -1.54
ATXN3-202ENST00000359366 NCANO14594 1321 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 NRCAMQ92823 1304 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 COMTP21964 271 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 TM4SF4P48230 202 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 AFF1P51825 1210 aaKnown RBP5.41□□□□□ -1.54
ATXN3-202ENST00000359366 MCCD1P59942 119 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-202ENST00000359366 GPC5P78333 572 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 GDF6Q6KF10 455 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-202ENST00000359366 CC2D1AQ6P1N0 951 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-202ENST00000359366 SRLQ86TD4 932 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 LSM14AQ8ND56 463 aaKnown RBP5.41□□□□□ -1.54
ATXN3-202ENST00000359366 C1orf131Q8NDD1 294 aaKnown RBP5.41□□□□□ -1.54
ATXN3-202ENST00000359366 ZNF564Q8TBZ8 553 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-202ENST00000359366 CD99L2Q8TCZ2 262 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 TAF4BQ92750 862 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 ANKRD36BP1Q96IX9 119 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 CAPNS2Q96L46 248 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 KLHL11Q9NVR0 708 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-202ENST00000359366 STXBP5LQ9Y2K9 1186 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 PPME1Q9Y570 386 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 ALG6Q9Y672 507 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 COL1A2P08123 1366 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 A0A1B0GUA9 196 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 TCRBV7S2A1N4TA0A589 114 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 C17orf102A2RUQ5 167 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 KIAA0391O15091 583 aaKnown RBP5.41□□□□□ -1.54
ATXN3-202ENST00000359366 CPP00450 1065 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 IVLP07476 585 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 MCF2P10911 925 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 UNGP13051 313 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-202ENST00000359366 CYBAP13498 195 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 AKR1A1P14550 325 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 TCF4P15884 667 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 TCP1P17987 556 aaKnown RBP5.41□□□□□ -1.54
ATXN3-202ENST00000359366 CPT1AP50416 773 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 FCGRTP55899 365 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 NFX1Q12986 1120 aaKnown RBP5.41□□□□□ -1.54
ATXN3-202ENST00000359366 TMEM132DQ14C87 1099 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 SNX17Q15036 470 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 CCDC142Q17RM4 750 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 ACAD10Q6JQN1 1059 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 DENND1BQ6P3S1 775 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 TMCO3Q6UWJ1 677 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 SLFN11Q7Z7L1 901 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 C10orf67Q8IYJ2 551 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 NME8Q8N427 588 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 SMC1BQ8NDV3 1235 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 ZNF606Q8WXB4 792 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 SOCS4Q8WXH5 440 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 VTI1AQ96AJ9 217 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 ACSF2Q96CM8 615 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-202ENST00000359366 ACAP3Q96P50 834 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 GCOM2Q9BZD3 368 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-202ENST00000359366 TRIM6Q9C030 488 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-202ENST00000359366 NIF3L1Q9GZT8 377 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 DDX47Q9H0S4 455 aaKnown RBP5.41□□□□□ -1.54
ATXN3-202ENST00000359366 PARP2Q9UGN5 583 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 ANAPC7Q9UJX3 599 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 AMFRQ9UKV5 643 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 USTQ9Y2C2 406 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 NOC2LQ9Y3T9 749 aaKnown RBP5.41□□□□□ -1.54
ATXN3-202ENST00000359366 PCDHB2Q9Y5E7 798 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 ZNF236Q9UL36 1845 aa5.41□□□□□ -1.54
ATXN3-202ENST00000359366 MROH7Q68CQ1 1323 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 RANBP2P49792 3224 aaKnown RBP5.4□□□□□ -1.54
ATXN3-202ENST00000359366 CDH23Q9H251 3354 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 MBLAC1A4D2B0 266 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-202ENST00000359366 BTNL10A8MVZ5 291 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 HAS3O00219 553 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 DDX3YO15523 660 aaKnown RBP5.4□□□□□ -1.54
ATXN3-202ENST00000359366 SPOPO43791 374 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 B4GALT4O60513 344 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 ZC3H11AO75152 810 aaKnown RBP eCLIP5.4□□□□□ -1.54
ATXN3-202ENST00000359366 RECQL4O94761 1208 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 FGGP02679 453 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 GLI1P08151 1106 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 DARSP14868 501 aaKnown RBP5.4□□□□□ -1.54
ATXN3-202ENST00000359366 EIF4BP23588 611 aaKnown RBP5.4□□□□□ -1.54
ATXN3-202ENST00000359366 PAFAH1B1P43034 410 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 NSFP46459 744 aaKnown RBP5.4□□□□□ -1.54
ATXN3-202ENST00000359366 INHBEP58166 350 aa5.4□□□□□ -1.54
ATXN3-202ENST00000359366 RPL7AP62424 266 aaKnown RBP5.4□□□□□ -1.54
ATXN3-202ENST00000359366 ADAM17P78536 824 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms