RNA–Protein interactions for RNA: ENST00000358779.9

CDK11A-204, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK11A, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-204ENST00000358779 MTFR1Q15390 333 aa18.8■□□□□ 0.6
CDK11A-204ENST00000358779 DNAJC24Q6P3W2 148 aa18.8■□□□□ 0.6
CDK11A-204ENST00000358779 SPOCD1Q6ZMY3 1216 aa18.8■□□□□ 0.6
CDK11A-204ENST00000358779 C12orf42Q96LP6 360 aa18.8■□□□□ 0.6
CDK11A-204ENST00000358779 TTC25Q96NG3 672 aa18.8■□□□□ 0.6
CDK11A-204ENST00000358779 HACL1Q9UJ83 578 aa18.8■□□□□ 0.6
CDK11A-204ENST00000358779 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.8■□□□□ 0.6
CDK11A-204ENST00000358779 FAM47DPA6NHR8 397 aa18.79■□□□□ 0.6
CDK11A-204ENST00000358779 ATG7O95352 703 aa18.79■□□□□ 0.6
CDK11A-204ENST00000358779 TAC1P20366 129 aa18.79■□□□□ 0.6
CDK11A-204ENST00000358779 COPS2P61201 443 aa18.79■□□□□ 0.6
CDK11A-204ENST00000358779 KCNJ2P63252 427 aa18.79■□□□□ 0.6
CDK11A-204ENST00000358779 IL9RQ01113 521 aa18.79■□□□□ 0.6
CDK11A-204ENST00000358779 LRRC38Q5VT99 294 aa18.79■□□□□ 0.6
CDK11A-204ENST00000358779 DCAF15Q66K64 600 aa18.79■□□□□ 0.6
CDK11A-204ENST00000358779 ZNF772Q68DY9 489 aaPredicted RBP18.79■□□□□ 0.6
CDK11A-204ENST00000358779 JDP2Q8WYK2 163 aa18.79■□□□□ 0.6
CDK11A-204ENST00000358779 RXFP1Q9HBX9 757 aa18.79■□□□□ 0.6
CDK11A-204ENST00000358779 PICK1Q9NRD5 415 aa18.79■□□□□ 0.6
CDK11A-204ENST00000358779 MCM8Q9UJA3 840 aa18.79■□□□□ 0.6
CDK11A-204ENST00000358779 TCRBV5S1A1TA0A578 114 aa18.79■□□□□ 0.6
CDK11A-204ENST00000358779 ETS1P14921 441 aa18.79■□□□□ 0.6
CDK11A-204ENST00000358779 EZRP15311 586 aaKnown RBP18.79■□□□□ 0.6
CDK11A-204ENST00000358779 PECAM1P16284 738 aaPredicted RBP18.79■□□□□ 0.6
CDK11A-204ENST00000358779 FOXN2P32314 431 aa18.79■□□□□ 0.6
CDK11A-204ENST00000358779 GPS1Q13098 491 aa18.79■□□□□ 0.6
CDK11A-204ENST00000358779 NR1H3Q13133 447 aa18.79■□□□□ 0.6
CDK11A-204ENST00000358779 RIPK1Q13546 671 aa18.79■□□□□ 0.6
CDK11A-204ENST00000358779 NEDD9Q14511 834 aa18.79■□□□□ 0.6
CDK11A-204ENST00000358779 E2F5Q15329 346 aa18.79■□□□□ 0.6
CDK11A-204ENST00000358779 TRABD2AQ86V40 505 aa18.79■□□□□ 0.6
CDK11A-204ENST00000358779 BRSK2Q8IWQ3 736 aa18.79■□□□□ 0.6
CDK11A-204ENST00000358779 RMDN2Q96LZ7 410 aa18.79■□□□□ 0.6
CDK11A-204ENST00000358779 TMEM134Q9H6X4 195 aa18.79■□□□□ 0.6
CDK11A-204ENST00000358779 F8VP50 259 aa18.78■□□□□ 0.6
CDK11A-204ENST00000358779 ATP2A1O14983 1001 aa18.78■□□□□ 0.6
CDK11A-204ENST00000358779 LSM8O95777 96 aaKnown RBP18.78■□□□□ 0.6
CDK11A-204ENST00000358779 ASS1P00966 412 aaKnown RBP18.78■□□□□ 0.6
CDK11A-204ENST00000358779 BRD2P25440 801 aaKnown RBP18.78■□□□□ 0.6
CDK11A-204ENST00000358779 OGDHQ02218 1023 aa18.78■□□□□ 0.6
CDK11A-204ENST00000358779 PDE4CQ08493 712 aa18.78■□□□□ 0.6
CDK11A-204ENST00000358779 CAPSQ13938 189 aa18.78■□□□□ 0.6
CDK11A-204ENST00000358779 FASTKD3Q14CZ7 662 aaKnown RBP18.78■□□□□ 0.6
CDK11A-204ENST00000358779 FITM2Q8N6M3 262 aa18.78■□□□□ 0.6
CDK11A-204ENST00000358779 WRNIP1Q96S55 665 aa18.78■□□□□ 0.6
CDK11A-204ENST00000358779 MYCBPQ99417 103 aaPredicted RBP18.78■□□□□ 0.6
CDK11A-204ENST00000358779 TACO1Q9BSH4 297 aaKnown RBP18.78■□□□□ 0.6
CDK11A-204ENST00000358779 PNMA3Q9UL41 463 aa18.78■□□□□ 0.6
CDK11A-204ENST00000358779 hCG_1818297A0A087WSY0 165 aa18.78■□□□□ 0.6
CDK11A-204ENST00000358779 IGF2BP3O00425 579 aaKnown RBP eCLIP18.78■□□□□ 0.6
CDK11A-204ENST00000358779 PTPN7P35236 360 aa18.78■□□□□ 0.6
CDK11A-204ENST00000358779 VCPP55072 806 aaKnown RBP18.78■□□□□ 0.6
CDK11A-204ENST00000358779 WDR4P57081 412 aaKnown RBP18.78■□□□□ 0.6
CDK11A-204ENST00000358779 EN1Q05925 392 aaPredicted RBP18.78■□□□□ 0.6
CDK11A-204ENST00000358779 RNF43Q68DV7 783 aa18.78■□□□□ 0.6
CDK11A-204ENST00000358779 DCUN1D2Q6PH85 259 aa18.78■□□□□ 0.6
CDK11A-204ENST00000358779 SAMD7Q7Z3H4 446 aa18.78■□□□□ 0.6
CDK11A-204ENST00000358779 TDRPQ86YL5 185 aa18.78■□□□□ 0.6
CDK11A-204ENST00000358779 GRAMD1AQ96CP6 724 aa18.78■□□□□ 0.6
CDK11A-204ENST00000358779 HAUS1Q96CS2 278 aa18.78■□□□□ 0.6
CDK11A-204ENST00000358779 NIFKQ9BYG3 293 aaKnown RBP18.78■□□□□ 0.6
CDK11A-204ENST00000358779 UBN1Q9NPG3 1134 aa18.78■□□□□ 0.6
CDK11A-204ENST00000358779 KLHL14Q9P2G3 628 aa18.78■□□□□ 0.6
CDK11A-204ENST00000358779 DRG1Q9Y295 367 aaKnown RBP18.78■□□□□ 0.6
CDK11A-204ENST00000358779 SPAG7O75391 227 aa18.77■□□□□ 0.6
CDK11A-204ENST00000358779 CST3P01034 146 aaPredicted RBP18.77■□□□□ 0.6
CDK11A-204ENST00000358779 ICAM3P32942 547 aa18.77■□□□□ 0.6
CDK11A-204ENST00000358779 TNFSF9P41273 254 aa18.77■□□□□ 0.6
CDK11A-204ENST00000358779 MGAT5Q09328 741 aa18.77■□□□□ 0.6
CDK11A-204ENST00000358779 ZNF268Q14587 947 aaPredicted RBP18.77■□□□□ 0.6
CDK11A-204ENST00000358779 MORF4L2Q15014 288 aa18.77■□□□□ 0.6
CDK11A-204ENST00000358779 OASLQ15646 514 aaKnown RBP18.77■□□□□ 0.6
CDK11A-204ENST00000358779 STXBP2Q15833 593 aa18.77■□□□□ 0.6
CDK11A-204ENST00000358779 TXNRD3NBQ6F5E7 133 aa18.77■□□□□ 0.6
CDK11A-204ENST00000358779 WDR49Q8IV35 697 aa18.77■□□□□ 0.6
CDK11A-204ENST00000358779 ACSF2Q96CM8 615 aaPredicted RBP18.77■□□□□ 0.6
CDK11A-204ENST00000358779 POC1B-GALNT4F8VUJ3 575 aa18.76■□□□□ 0.59
CDK11A-204ENST00000358779 RFC5P40937 340 aa18.76■□□□□ 0.59
CDK11A-204ENST00000358779 ACVR2BQ13705 512 aa18.76■□□□□ 0.59
CDK11A-204ENST00000358779 TFDP3Q5H9I0 405 aa18.76■□□□□ 0.59
CDK11A-204ENST00000358779 HP1BP3Q5SSJ5 553 aaPredicted RBP18.76■□□□□ 0.59
CDK11A-204ENST00000358779 MICALL2Q8IY33 904 aa18.76■□□□□ 0.59
CDK11A-204ENST00000358779 TMEM35BQ8NCS4 154 aa18.76■□□□□ 0.59
CDK11A-204ENST00000358779 KLHL29Q96CT2 875 aa18.76■□□□□ 0.59
CDK11A-204ENST00000358779 PAIP2Q9BPZ3 127 aaKnown RBP18.76■□□□□ 0.59
CDK11A-204ENST00000358779 MTMR12Q9C0I1 747 aa18.76■□□□□ 0.59
CDK11A-204ENST00000358779 DDX56Q9NY93 547 aaKnown RBP18.76■□□□□ 0.59
CDK11A-204ENST00000358779 ZNF112Q9UJU3 913 aa18.76■□□□□ 0.59
CDK11A-204ENST00000358779 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.76■□□□□ 0.59
CDK11A-204ENST00000358779 LRRD1A4D1F6 860 aa18.76■□□□□ 0.59
CDK11A-204ENST00000358779 ADCY3O60266 1144 aa18.76■□□□□ 0.59
CDK11A-204ENST00000358779 ASMTLO95671 621 aa18.76■□□□□ 0.59
CDK11A-204ENST00000358779 IBSPP21815 317 aaPredicted RBP18.76■□□□□ 0.59
CDK11A-204ENST00000358779 ALDH5A1P51649 535 aaPredicted RBP18.76■□□□□ 0.59
CDK11A-204ENST00000358779 AP3M2P53677 418 aa18.76■□□□□ 0.59
CDK11A-204ENST00000358779 CCDC142Q17RM4 750 aa18.76■□□□□ 0.59
CDK11A-204ENST00000358779 PPP1R15BQ5SWA1 713 aa18.76■□□□□ 0.59
CDK11A-204ENST00000358779 RNASEH2BQ5TBB1 312 aaKnown RBP18.76■□□□□ 0.59
CDK11A-204ENST00000358779 CATSPERGQ6ZRH7 1159 aa18.76■□□□□ 0.59
CDK11A-204ENST00000358779 FAM47EQ6ZV65 393 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms