RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 TUBGCP4Q9UGJ1 667 aa17.26■□□□□ 0.35
IFT20-202ENST00000357896 MTMR11A4FU01 709 aa17.25■□□□□ 0.35
IFT20-202ENST00000357896 SRRM3A6NNA2 597 aaPredicted RBP17.25■□□□□ 0.35
IFT20-202ENST00000357896 SOBPA7XYQ1 873 aa17.25■□□□□ 0.35
IFT20-202ENST00000357896 ABLIM1O14639 778 aa17.25■□□□□ 0.35
IFT20-202ENST00000357896 KHNYNO15037 678 aaKnown RBP17.25■□□□□ 0.35
IFT20-202ENST00000357896 DTNBO60941 627 aa17.25■□□□□ 0.35
IFT20-202ENST00000357896 RNF40O75150 1001 aa17.25■□□□□ 0.35
IFT20-202ENST00000357896 HARSP12081 509 aaKnown RBP17.25■□□□□ 0.35
IFT20-202ENST00000357896 LRPAP1P30533 357 aa17.25■□□□□ 0.35
IFT20-202ENST00000357896 TUFMP49411 452 aaKnown RBP17.25■□□□□ 0.35
IFT20-202ENST00000357896 VEPH1Q14D04 833 aa17.25■□□□□ 0.35
IFT20-202ENST00000357896 OVOS1Q6IE37 1185 aa17.25■□□□□ 0.35
IFT20-202ENST00000357896 LRSAM1Q6UWE0 723 aa17.25■□□□□ 0.35
IFT20-202ENST00000357896 DSTYKQ6XUX3 929 aa17.25■□□□□ 0.35
IFT20-202ENST00000357896 ATAD1Q8NBU5 361 aa17.25■□□□□ 0.35
IFT20-202ENST00000357896 DRC1Q96MC2 740 aa17.25■□□□□ 0.35
IFT20-202ENST00000357896 TMEM121BQ9BXQ6 578 aaPredicted RBP17.25■□□□□ 0.35
IFT20-202ENST00000357896 C17orf75Q9HAS0 396 aa17.25■□□□□ 0.35
IFT20-202ENST00000357896 TMEM9BQ9NQ34 198 aa17.25■□□□□ 0.35
IFT20-202ENST00000357896 EBF1Q9UH73 591 aa17.25■□□□□ 0.35
IFT20-202ENST00000357896 KCNG1Q9UIX4 513 aa17.25■□□□□ 0.35
IFT20-202ENST00000357896 IGF2RP11717 2491 aa17.25■□□□□ 0.35
IFT20-202ENST00000357896 WDFY3Q8IZQ1 3526 aa17.24■□□□□ 0.35
IFT20-202ENST00000357896 LNP1A1A4G5 178 aa17.24■□□□□ 0.35
IFT20-202ENST00000357896 MEFVO15553 781 aaPredicted RBP17.24■□□□□ 0.35
IFT20-202ENST00000357896 TOM1L1O75674 476 aa17.24■□□□□ 0.35
IFT20-202ENST00000357896 APBB3O95704 486 aa17.24■□□□□ 0.35
IFT20-202ENST00000357896 OR52Z1P0C646 297 aa17.24■□□□□ 0.35
IFT20-202ENST00000357896 TYMPP19971 482 aa17.24■□□□□ 0.35
IFT20-202ENST00000357896 SPINK2P20155 84 aa17.24■□□□□ 0.35
IFT20-202ENST00000357896 CYP3A5P20815 502 aa17.24■□□□□ 0.35
IFT20-202ENST00000357896 CCT6AP40227 531 aaKnown RBP17.24■□□□□ 0.35
IFT20-202ENST00000357896 AARSP49588 968 aaKnown RBP eCLIP17.24■□□□□ 0.35
IFT20-202ENST00000357896 STRN3Q13033 797 aa17.24■□□□□ 0.35
IFT20-202ENST00000357896 ORC2Q13416 577 aaPredicted RBP17.24■□□□□ 0.35
IFT20-202ENST00000357896 TAF12Q16514 161 aa17.24■□□□□ 0.35
IFT20-202ENST00000357896 SYT13Q7L8C5 426 aa17.24■□□□□ 0.35
IFT20-202ENST00000357896 TAS1R3Q7RTX0 852 aa17.24■□□□□ 0.35
IFT20-202ENST00000357896 CMTM8Q8IZV2 173 aa17.24■□□□□ 0.35
IFT20-202ENST00000357896 GATA6Q92908 595 aa17.24■□□□□ 0.35
IFT20-202ENST00000357896 HHIPQ96QV1 700 aa17.24■□□□□ 0.35
IFT20-202ENST00000357896 SCNM1Q9BWG6 230 aa17.24■□□□□ 0.35
IFT20-202ENST00000357896 SLC46A2Q9BY10 475 aa17.24■□□□□ 0.35
IFT20-202ENST00000357896 KIAA1024Q9UPX6 916 aa17.24■□□□□ 0.35
IFT20-202ENST00000357896 FASNP49327 2511 aaKnown RBP17.24■□□□□ 0.35
IFT20-202ENST00000357896 NUP210Q8TEM1 1887 aaPredicted RBP17.23■□□□□ 0.35
IFT20-202ENST00000357896 EGFP01133 1207 aa17.23■□□□□ 0.35
IFT20-202ENST00000357896 PAX3P23760 479 aa17.23■□□□□ 0.35
IFT20-202ENST00000357896 GBP1P32455 592 aa17.23■□□□□ 0.35
IFT20-202ENST00000357896 AVPR1AP37288 418 aa17.23■□□□□ 0.35
IFT20-202ENST00000357896 NOLC1Q14978 699 aaKnown RBP eCLIP17.23■□□□□ 0.35
IFT20-202ENST00000357896 ANKRD1Q15327 319 aa17.23■□□□□ 0.35
IFT20-202ENST00000357896 CC2D1AQ6P1N0 951 aaPredicted RBP17.23■□□□□ 0.35
IFT20-202ENST00000357896 P2RY13Q9BPV8 354 aa17.23■□□□□ 0.35
IFT20-202ENST00000357896 EBF3Q9H4W6 596 aa17.23■□□□□ 0.35
IFT20-202ENST00000357896 HPS4Q9NQG7 708 aa17.23■□□□□ 0.35
IFT20-202ENST00000357896 ANKFY1Q9P2R3 1169 aa17.23■□□□□ 0.35
IFT20-202ENST00000357896 UBQLN1Q9UMX0 589 aaKnown RBP17.23■□□□□ 0.35
IFT20-202ENST00000357896 STK24Q9Y6E0 443 aa17.23■□□□□ 0.35
IFT20-202ENST00000357896 DCLK1O15075 740 aa17.22■□□□□ 0.35
IFT20-202ENST00000357896 CLDN3O15551 220 aa17.22■□□□□ 0.35
IFT20-202ENST00000357896 XPOTO43592 962 aaKnown RBP17.22■□□□□ 0.35
IFT20-202ENST00000357896 SOAT2O75908 522 aa17.22■□□□□ 0.35
IFT20-202ENST00000357896 LARGE1O95461 756 aa17.22■□□□□ 0.35
IFT20-202ENST00000357896 CLTAP09496 248 aa17.22■□□□□ 0.35
IFT20-202ENST00000357896 GALK1P51570 392 aa17.22■□□□□ 0.35
IFT20-202ENST00000357896 CYP4F8P98187 520 aa17.22■□□□□ 0.35
IFT20-202ENST00000357896 BFSP1Q12934 665 aa17.22■□□□□ 0.35
IFT20-202ENST00000357896 SAFBQ15424 915 aaKnown RBP eCLIP17.22■□□□□ 0.35
IFT20-202ENST00000357896 ECM1Q16610 540 aa17.22■□□□□ 0.35
IFT20-202ENST00000357896 USP39Q53GS9 565 aaKnown RBP17.22■□□□□ 0.35
IFT20-202ENST00000357896 CCDC26Q8TAB7 109 aa17.22■□□□□ 0.35
IFT20-202ENST00000357896 ZCCHC14Q8WYQ9 949 aaKnown RBP17.22■□□□□ 0.35
IFT20-202ENST00000357896 ACDQ96AP0 544 aa17.22■□□□□ 0.35
IFT20-202ENST00000357896 KIF12Q96FN5 646 aa17.22■□□□□ 0.35
IFT20-202ENST00000357896 ZBTB45Q96K62 511 aaPredicted RBP17.22■□□□□ 0.35
IFT20-202ENST00000357896 TSPAN18Q96SJ8 248 aa17.22■□□□□ 0.35
IFT20-202ENST00000357896 SEPT5Q99719 369 aaPredicted RBP17.22■□□□□ 0.35
IFT20-202ENST00000357896 NTPCRQ9BSD7 190 aaKnown RBP17.22■□□□□ 0.35
IFT20-202ENST00000357896 SMG9Q9H0W8 520 aaKnown RBP17.22■□□□□ 0.35
IFT20-202ENST00000357896 KIF9Q9HAQ2 790 aa17.22■□□□□ 0.35
IFT20-202ENST00000357896 DDX19AQ9NUU7 478 aaKnown RBP17.22■□□□□ 0.35
IFT20-202ENST00000357896 LHX6Q9UPM6 363 aa17.22■□□□□ 0.35
IFT20-202ENST00000357896 OTOL1A6NHN0 477 aaPredicted RBP17.21■□□□□ 0.35
IFT20-202ENST00000357896 HIP1RO75146 1068 aa17.21■□□□□ 0.35
IFT20-202ENST00000357896 ODC1P11926 461 aa17.21■□□□□ 0.35
IFT20-202ENST00000357896 DDX6P26196 483 aaKnown RBP eCLIP17.21■□□□□ 0.35
IFT20-202ENST00000357896 RING1Q06587 406 aa17.21■□□□□ 0.35
IFT20-202ENST00000357896 PDGFRLQ15198 375 aa17.21■□□□□ 0.35
IFT20-202ENST00000357896 ZBTB6Q15916 424 aa17.21■□□□□ 0.35
IFT20-202ENST00000357896 SEZ6Q53EL9 994 aa17.21■□□□□ 0.35
IFT20-202ENST00000357896 ZPBP2Q6X784 338 aa17.21■□□□□ 0.35
IFT20-202ENST00000357896 DAW1Q8N136 415 aa17.21■□□□□ 0.35
IFT20-202ENST00000357896 TTC9BQ8N6N2 239 aa17.21■□□□□ 0.35
IFT20-202ENST00000357896 RPLP0P6Q8NHW5 317 aa17.21■□□□□ 0.35
IFT20-202ENST00000357896 CHFRQ96EP1 664 aa17.21■□□□□ 0.35
IFT20-202ENST00000357896 IL21Q9HBE4 155 aa17.21■□□□□ 0.35
IFT20-202ENST00000357896 LRWD1Q9UFC0 647 aa17.21■□□□□ 0.35
IFT20-202ENST00000357896 DNM3Q9UQ16 869 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms