RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.52□□□□□ -0.739e-6■■□□□ 11.8
RNF40-202ENST00000357890 CCDC89Q8N998 374 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 MTBPQ96DY7 904 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 SNF8Q96H20 258 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 CEP170P1Q96L14 293 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 MXRA8Q9BRK3 442 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 KLHL11Q9NVR0 708 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 LMCD1Q9NZU5 365 aa10.52□□□□□ -0.73
RNF40-202ENST00000357890 TCRBV7S2A1N4TA0A589 114 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 DDX3YO15523 660 aaKnown RBP10.51□□□□□ -0.73
RNF40-202ENST00000357890 PEX11AO75192 247 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 TMCC1O94876 653 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 MAN1A1P33908 653 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 ALDH18A1P54886 795 aaKnown RBP10.51□□□□□ -0.73
RNF40-202ENST00000357890 MTMR1Q13613 665 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 CYTH1Q15438 398 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 SNRNP35Q16560 246 aaKnown RBP10.51□□□□□ -0.73
RNF40-202ENST00000357890 DPH6Q7L8W6 267 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 PRUNE1Q86TP1 453 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 ZBED8Q8IZ13 594 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 LRRC43Q8N309 656 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 SLC16A10Q8TF71 515 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 DHX38Q92620 1227 aaKnown RBP10.51□□□□□ -0.73
RNF40-202ENST00000357890 SERPINB12Q96P63 405 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 RBM15Q96T37 977 aaKnown RBP eCLIP10.51□□□□□ -0.73
RNF40-202ENST00000357890 ZNF184Q99676 751 aaPredicted RBP10.51□□□□□ -0.73
RNF40-202ENST00000357890 ROPN1BQ9BZX4 212 aaPredicted RBP10.51□□□□□ -0.73
RNF40-202ENST00000357890 ROPN1Q9HAT0 212 aaPredicted RBP10.51□□□□□ -0.73
RNF40-202ENST00000357890 IFT122Q9HBG6 1241 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 DMAP1Q9NPF5 467 aaPredicted RBP10.51□□□□□ -0.73
RNF40-202ENST00000357890 DNAAF2Q9NVR5 837 aaKnown RBP10.51□□□□□ -0.73
RNF40-202ENST00000357890 TMEM150BA6NC51 233 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 SPECC1L-ADORA2AF8WAN1 911 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 P4HA2O15460 535 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 MT-ND3P03897 115 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 LIG4P49917 911 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 MYBPC2Q14324 1141 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 BBS9Q3SYG4 887 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 SYCP2LQ5T4T6 812 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 NLRX1Q86UT6 975 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 FBXL13Q8NEE6 735 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 ANKRD27Q96NW4 1050 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 P2RX7Q99572 595 aaKnown RBP10.51□□□□□ -0.73
RNF40-202ENST00000357890 FAM213AQ9BRX8 229 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 GINM1Q9NU53 330 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 RAB20Q9NX57 234 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 PI4K2BG5E9Z4 385 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 ADCY3O60266 1144 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 TJP3O95049 919 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 ASNSP08243 561 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 CD58P19256 250 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 ABCD1P33897 745 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 DYNLT1P63172 113 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 ASPHQ12797 758 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 MTFR1Q15390 333 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 WASHC2DQ5SRD0 308 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 DCAF12L1Q5VU92 463 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 SIAH1Q8IUQ4 282 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 TMEM117Q9H0C3 514 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 KCNH7Q9NS40 1196 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 PCDHB4Q9Y5E5 795 aa10.51□□□□□ -0.73
RNF40-202ENST00000357890 COL5A3P25940 1745 aaPredicted RBP10.5□□□□□ -0.73
RNF40-202ENST00000357890 IGLV3-22A0A075B6J6 115 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 USP1O94782 785 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 CALCAP01258 141 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 MTMR2Q13614 643 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 BRDTQ58F21 947 aaPredicted RBP10.5□□□□□ -0.73
RNF40-202ENST00000357890 UBAP2Q5T6F2 1119 aaKnown RBP10.5□□□□□ -0.73
RNF40-202ENST00000357890 MTHFD1LQ6UB35 978 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 DSTYKQ6XUX3 929 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 TRIML2Q8N7C3 387 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 NSL1Q96IY1 281 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 TBC1D22BQ9NU19 505 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 ANKFY1Q9P2R3 1169 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 SGK1O00141 431 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 VIL1P09327 827 aaKnown RBP10.5□□□□□ -0.73
RNF40-202ENST00000357890 NUDT17P0C025 328 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 CYP11B1P15538 503 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 ITIH2P19823 946 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 CHRNA5P30532 468 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 YWHAGP61981 247 aaKnown RBP eCLIP10.5□□□□□ -0.73
RNF40-202ENST00000357890 TMPRSS15P98073 1019 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 NFIL3Q16649 462 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 PLA2G4FQ68DD2 849 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 DEFB132Q7Z7B7 95 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 NOP9Q86U38 636 aaKnown RBP10.5□□□□□ -0.73
RNF40-202ENST00000357890 APLFQ8IW19 511 aaPredicted RBP10.5□□□□□ -0.73
RNF40-202ENST00000357890 ASAP3Q8TDY4 903 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 FAM151AQ8WW52 585 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 TRAPPC9Q96Q05 1148 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 PCMTD2Q9NV79 361 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 UVRAGQ9P2Y5 699 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 ATXN10Q9UBB4 475 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 SYNPO2Q9UMS6 1093 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 PSMG1O95456 288 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 VCAM1P19320 739 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 YWHABP31946 246 aaKnown RBP10.5□□□□□ -0.73
RNF40-202ENST00000357890 CYLC2Q14093 348 aaPredicted RBP10.5□□□□□ -0.73
RNF40-202ENST00000357890 ARHGEF16Q5VV41 709 aa10.5□□□□□ -0.73
RNF40-202ENST00000357890 BBOF1Q8ND07 529 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms