RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 PXMP2Q9NR77 195 aa18.69■□□□□ 0.58
RTN4-204ENST00000357732 CYP39A1Q9NYL5 469 aa18.69■□□□□ 0.58
RTN4-204ENST00000357732 EFR3BQ9Y2G0 817 aa18.69■□□□□ 0.58
RTN4-204ENST00000357732 ABLIM1O14639 778 aa18.69■□□□□ 0.58
RTN4-204ENST00000357732 LSM8O95777 96 aaKnown RBP18.69■□□□□ 0.58
RTN4-204ENST00000357732 LDHAP00338 332 aaKnown RBP18.69■□□□□ 0.58
RTN4-204ENST00000357732 CALB1P05937 261 aa18.69■□□□□ 0.58
RTN4-204ENST00000357732 TSHRP16473 764 aa18.69■□□□□ 0.58
RTN4-204ENST00000357732 GNAZP19086 355 aa18.69■□□□□ 0.58
RTN4-204ENST00000357732 CA4P22748 312 aa18.69■□□□□ 0.58
RTN4-204ENST00000357732 PSEN1P49768 467 aa18.69■□□□□ 0.58
RTN4-204ENST00000357732 RPS6P62753 249 aaKnown RBP18.69■□□□□ 0.58
RTN4-204ENST00000357732 OASLQ15646 514 aaKnown RBP18.69■□□□□ 0.58
RTN4-204ENST00000357732 RNASEH2BQ5TBB1 312 aaKnown RBP18.69■□□□□ 0.58
RTN4-204ENST00000357732 NLRX1Q86UT6 975 aa18.69■□□□□ 0.58
RTN4-204ENST00000357732 FBXO41Q8TF61 875 aa18.69■□□□□ 0.58
RTN4-204ENST00000357732 TAAR1Q96RJ0 339 aa18.69■□□□□ 0.58
RTN4-204ENST00000357732 GMLQ99445 158 aa18.69■□□□□ 0.58
RTN4-204ENST00000357732 ZNF341Q9BYN7 854 aa18.69■□□□□ 0.58
RTN4-204ENST00000357732 DNPEPQ9ULA0 475 aa18.69■□□□□ 0.58
RTN4-204ENST00000357732 LRRC42Q9Y546 428 aa18.69■□□□□ 0.58
RTN4-204ENST00000357732 TMEM191CA6NGB0 347 aa18.68■□□□□ 0.58
RTN4-204ENST00000357732 ATP9AO75110 1047 aa18.68■□□□□ 0.58
RTN4-204ENST00000357732 PIGRP01833 764 aa18.68■□□□□ 0.58
RTN4-204ENST00000357732 TMEM191BP0C7N4 346 aa18.68■□□□□ 0.58
RTN4-204ENST00000357732 TNNI1P19237 187 aa18.68■□□□□ 0.58
RTN4-204ENST00000357732 EIF2AK2P19525 551 aaKnown RBP18.68■□□□□ 0.58
RTN4-204ENST00000357732 MMP8P22894 467 aa18.68■□□□□ 0.58
RTN4-204ENST00000357732 LIG4P49917 911 aa18.68■□□□□ 0.58
RTN4-204ENST00000357732 BLMHQ13867 455 aa18.68■□□□□ 0.58
RTN4-204ENST00000357732 HHATQ5VTY9 493 aa18.68■□□□□ 0.58
RTN4-204ENST00000357732 TDRD10Q5VZ19 366 aaKnown RBP18.68■□□□□ 0.58
RTN4-204ENST00000357732 SLFN12LQ6IEE8 588 aa18.68■□□□□ 0.58
RTN4-204ENST00000357732 STK32AQ8WU08 396 aa18.68■□□□□ 0.58
RTN4-204ENST00000357732 CORO1CQ9ULV4 474 aaPredicted RBP18.68■□□□□ 0.58
RTN4-204ENST00000357732 PCDHB4Q9Y5E5 795 aa18.68■□□□□ 0.58
RTN4-204ENST00000357732 TM9SF1O15321 606 aa18.68■□□□□ 0.58
RTN4-204ENST00000357732 GEMIN4P57678 1058 aaKnown RBP18.68■□□□□ 0.58
RTN4-204ENST00000357732 GPS1Q13098 491 aa18.68■□□□□ 0.58
RTN4-204ENST00000357732 DGKZQ13574 1117 aa18.68■□□□□ 0.58
RTN4-204ENST00000357732 PKN2Q16513 984 aaKnown RBP18.68■□□□□ 0.58
RTN4-204ENST00000357732 RMDN3Q96TC7 470 aa18.68■□□□□ 0.58
RTN4-204ENST00000357732 GINM1Q9NU53 330 aa18.68■□□□□ 0.58
RTN4-204ENST00000357732 SCAF8Q9UPN6 1271 aaKnown RBP18.68■□□□□ 0.58
RTN4-204ENST00000357732 SPAG7O75391 227 aa18.67■□□□□ 0.58
RTN4-204ENST00000357732 RPA3P35244 121 aaPredicted RBP18.67■□□□□ 0.58
RTN4-204ENST00000357732 SSR1P43307 286 aaKnown RBP18.67■□□□□ 0.58
RTN4-204ENST00000357732 PIGHQ14442 188 aaPredicted RBP18.67■□□□□ 0.58
RTN4-204ENST00000357732 TFDP3Q5H9I0 405 aa18.67■□□□□ 0.58
RTN4-204ENST00000357732 SPOCD1Q6ZMY3 1216 aa18.67■□□□□ 0.58
RTN4-204ENST00000357732 APLFQ8IW19 511 aaPredicted RBP18.67■□□□□ 0.58
RTN4-204ENST00000357732 NIPA2Q8N8Q9 360 aa18.67■□□□□ 0.58
RTN4-204ENST00000357732 ZNF518BQ9C0D4 1074 aa18.67■□□□□ 0.58
RTN4-204ENST00000357732 FHDC1Q9C0D6 1143 aaPredicted RBP18.67■□□□□ 0.58
RTN4-204ENST00000357732 VPS37BQ9H9H4 285 aa18.67■□□□□ 0.58
RTN4-204ENST00000357732 RAVER2Q9HCJ3 691 aaKnown RBP18.67■□□□□ 0.58
RTN4-204ENST00000357732 USTQ9Y2C2 406 aa18.67■□□□□ 0.58
RTN4-204ENST00000357732 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.67■□□□□ 0.58
RTN4-204ENST00000357732 POC1B-GALNT4F8VUJ3 575 aa18.67■□□□□ 0.58
RTN4-204ENST00000357732 SMNDC1O75940 238 aaKnown RBP eCLIP18.67■□□□□ 0.582e-15■■■□□ 16
RTN4-204ENST00000357732 STBD1O95210 358 aa18.67■□□□□ 0.58
RTN4-204ENST00000357732 KRT1P04264 644 aa18.67■□□□□ 0.58
RTN4-204ENST00000357732 PSAPP07602 524 aa18.67■□□□□ 0.58
RTN4-204ENST00000357732 TROVE2P10155 538 aaKnown RBP eCLIP18.67■□□□□ 0.58
RTN4-204ENST00000357732 ADCY1Q08828 1119 aa18.67■□□□□ 0.58
RTN4-204ENST00000357732 KLHL38Q2WGJ6 581 aa18.67■□□□□ 0.58
RTN4-204ENST00000357732 TMEM270Q6UE05 265 aa18.67■□□□□ 0.58
RTN4-204ENST00000357732 TAS1R3Q7RTX0 852 aa18.67■□□□□ 0.58
RTN4-204ENST00000357732 RBBP8NLQ8NC74 664 aaPredicted RBP18.67■□□□□ 0.58
RTN4-204ENST00000357732 SLC7A6OSQ96CW6 309 aaPredicted RBP18.67■□□□□ 0.58
RTN4-204ENST00000357732 NAF1Q96HR8 494 aaKnown RBP18.67■□□□□ 0.58
RTN4-204ENST00000357732 WDR81Q562E7 1941 aa18.66■□□□□ 0.58
RTN4-204ENST00000357732 PEX11AO75192 247 aa18.66■□□□□ 0.58
RTN4-204ENST00000357732 VNN1O95497 513 aa18.66■□□□□ 0.58
RTN4-204ENST00000357732 CALCAP01258 141 aa18.66■□□□□ 0.58
RTN4-204ENST00000357732 MYCLP12524 364 aaPredicted RBP18.66■□□□□ 0.58
RTN4-204ENST00000357732 RXRBP28702 533 aa18.66■□□□□ 0.58
RTN4-204ENST00000357732 PTPN4P29074 926 aa18.66■□□□□ 0.58
RTN4-204ENST00000357732 CCND2P30279 289 aa18.66■□□□□ 0.58
RTN4-204ENST00000357732 LLGL2Q6P1M3 1020 aa18.66■□□□□ 0.58
RTN4-204ENST00000357732 POLNQ7Z5Q5 900 aa18.66■□□□□ 0.58
RTN4-204ENST00000357732 ZBED8Q8IZ13 594 aa18.66■□□□□ 0.58
RTN4-204ENST00000357732 MTMR14Q8NCE2 650 aa18.66■□□□□ 0.58
RTN4-204ENST00000357732 FAM13CQ8NE31 585 aa18.66■□□□□ 0.58
RTN4-204ENST00000357732 KIAA1683Q9H0B3 1180 aa18.66■□□□□ 0.58
RTN4-204ENST00000357732 AGO2Q9UKV8 859 aaKnown RBP18.66■□□□□ 0.58
RTN4-204ENST00000357732 hCG_1818297A0A087WSY0 165 aa18.66■□□□□ 0.58
RTN4-204ENST00000357732 CHRM1P11229 460 aaPredicted RBP18.66■□□□□ 0.58
RTN4-204ENST00000357732 TARSP26639 723 aaKnown RBP18.66■□□□□ 0.58
RTN4-204ENST00000357732 ZNF132P52740 706 aa18.66■□□□□ 0.58
RTN4-204ENST00000357732 AP3M2P53677 418 aa18.66■□□□□ 0.58
RTN4-204ENST00000357732 TAF11Q15544 211 aa18.66■□□□□ 0.58
RTN4-204ENST00000357732 HIF1AQ16665 826 aa18.66■□□□□ 0.58
RTN4-204ENST00000357732 ARHGEF16Q5VV41 709 aa18.66■□□□□ 0.58
RTN4-204ENST00000357732 MFSD7Q6UXD7 560 aa18.66■□□□□ 0.58
RTN4-204ENST00000357732 CCDC125Q86Z20 511 aa18.66■□□□□ 0.58
RTN4-204ENST00000357732 ATP11CQ8NB49 1132 aa18.66■□□□□ 0.58
RTN4-204ENST00000357732 TTC13Q8NBP0 860 aa18.66■□□□□ 0.58
RTN4-204ENST00000357732 ZNF75CPQ92670 426 aaPredicted RBP18.66■□□□□ 0.58
RTN4-204ENST00000357732 CGRRF1Q99675 332 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms