RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 F8VZ95 297 aa27.13■■□□□ 1.93
SSBP3-202ENST00000357475 TACC1O75410 805 aa27.13■■□□□ 1.93
SSBP3-202ENST00000357475 SOD2P04179 222 aa27.13■■□□□ 1.93
SSBP3-202ENST00000357475 WARSP23381 471 aaKnown RBP27.13■■□□□ 1.93
SSBP3-202ENST00000357475 ACAT1P24752 427 aaKnown RBP27.13■■□□□ 1.93
SSBP3-202ENST00000357475 CASP14P31944 242 aa27.13■■□□□ 1.93
SSBP3-202ENST00000357475 INCA1Q0VD86 236 aa27.13■■□□□ 1.93
SSBP3-202ENST00000357475 CCDC142Q17RM4 750 aa27.13■■□□□ 1.93
SSBP3-202ENST00000357475 ZNF394Q53GI3 561 aa27.13■■□□□ 1.93
SSBP3-202ENST00000357475 VARS2Q5ST30 1063 aaKnown RBP27.13■■□□□ 1.93
SSBP3-202ENST00000357475 KIAA0319Q5VV43 1072 aa27.13■■□□□ 1.93
SSBP3-202ENST00000357475 PRSS55Q6UWB4 352 aaPredicted RBP27.13■■□□□ 1.93
SSBP3-202ENST00000357475 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.13■■□□□ 1.93
SSBP3-202ENST00000357475 DPH6Q7L8W6 267 aa27.13■■□□□ 1.93
SSBP3-202ENST00000357475 VPS52Q8N1B4 723 aa27.13■■□□□ 1.93
SSBP3-202ENST00000357475 OR6B3Q8NGW1 331 aa27.13■■□□□ 1.93
SSBP3-202ENST00000357475 SPPL3Q8TCT6 385 aa27.13■■□□□ 1.93
SSBP3-202ENST00000357475 LPIN3Q9BQK8 851 aa27.13■■□□□ 1.93
SSBP3-202ENST00000357475 HERC2P3Q9BVR0 1158 aa27.13■■□□□ 1.93
SSBP3-202ENST00000357475 PLVAPQ9BX97 442 aa27.13■■□□□ 1.93
SSBP3-202ENST00000357475 STK33Q9BYT3 514 aa27.13■■□□□ 1.93
SSBP3-202ENST00000357475 ELOVL4Q9GZR5 314 aa27.13■■□□□ 1.93
SSBP3-202ENST00000357475 DPEP3Q9H4B8 488 aa27.13■■□□□ 1.93
SSBP3-202ENST00000357475 CHST7Q9NS84 486 aa27.13■■□□□ 1.93
SSBP3-202ENST00000357475 TRANK1O15050 2925 aa27.13■■□□□ 1.93
SSBP3-202ENST00000357475 A0A1W2PPC1 479 aa27.12■■□□□ 1.93
SSBP3-202ENST00000357475 GABRDO14764 452 aa27.12■■□□□ 1.93
SSBP3-202ENST00000357475 SYN3O14994 580 aa27.12■■□□□ 1.93
SSBP3-202ENST00000357475 GRM6O15303 877 aa27.12■■□□□ 1.93
SSBP3-202ENST00000357475 CILPO75339 1184 aa27.12■■□□□ 1.93
SSBP3-202ENST00000357475 TYMPP19971 482 aa27.12■■□□□ 1.93
SSBP3-202ENST00000357475 CDR1P51861 262 aa27.12■■□□□ 1.93
SSBP3-202ENST00000357475 NDST1P52848 882 aa27.12■■□□□ 1.93
SSBP3-202ENST00000357475 ELAVL2Q12926 359 aaKnown RBP27.12■■□□□ 1.93
SSBP3-202ENST00000357475 LRIT3Q3SXY7 679 aa27.12■■□□□ 1.93
SSBP3-202ENST00000357475 ENOSF1Q7L5Y1 443 aa27.12■■□□□ 1.93
SSBP3-202ENST00000357475 CACNA2D4Q7Z3S7 1137 aa27.12■■□□□ 1.93
SSBP3-202ENST00000357475 DRC7Q8IY82 874 aa27.12■■□□□ 1.93
SSBP3-202ENST00000357475 ARNTL2Q8WYA1 636 aa27.12■■□□□ 1.93
SSBP3-202ENST00000357475 TTPALQ9BTX7 342 aa27.12■■□□□ 1.93
SSBP3-202ENST00000357475 NUP58Q9BVL2 599 aa27.12■■□□□ 1.93
SSBP3-202ENST00000357475 ACP6Q9NPH0 428 aa27.12■■□□□ 1.93
SSBP3-202ENST00000357475 CAPN11Q9UMQ6 739 aa27.12■■□□□ 1.93
SSBP3-202ENST00000357475 PCDHB4Q9Y5E5 795 aa27.12■■□□□ 1.93
SSBP3-202ENST00000357475 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP27.12■■□□□ 1.93
SSBP3-202ENST00000357475 C2CD2LO14523 706 aa27.11■■□□□ 1.93
SSBP3-202ENST00000357475 PDGFRBP09619 1106 aa27.11■■□□□ 1.93
SSBP3-202ENST00000357475 RFX1P22670 979 aa27.11■■□□□ 1.93
SSBP3-202ENST00000357475 KRT17Q04695 432 aa27.11■■□□□ 1.93
SSBP3-202ENST00000357475 YWHAHQ04917 246 aaPredicted RBP27.11■■□□□ 1.93
SSBP3-202ENST00000357475 USP41Q3LFD5 358 aa27.11■■□□□ 1.93
SSBP3-202ENST00000357475 E4F1Q66K89 784 aaPredicted RBP27.11■■□□□ 1.93
SSBP3-202ENST00000357475 OVOS1Q6IE37 1185 aa27.11■■□□□ 1.93
SSBP3-202ENST00000357475 TMEM270Q6UE05 265 aa27.11■■□□□ 1.93
SSBP3-202ENST00000357475 RSPO2Q6UXX9 243 aaPredicted RBP27.11■■□□□ 1.93
SSBP3-202ENST00000357475 FBXO22Q8NEZ5 403 aa27.11■■□□□ 1.93
SSBP3-202ENST00000357475 OR10T2Q8NGX3 314 aa27.11■■□□□ 1.93
SSBP3-202ENST00000357475 TMEM209Q96SK2 561 aa27.11■■□□□ 1.93
SSBP3-202ENST00000357475 DDX43Q9NXZ2 648 aaKnown RBP27.11■■□□□ 1.93
SSBP3-202ENST00000357475 PCDHGC5Q9Y5F6 944 aa27.11■■□□□ 1.93
SSBP3-202ENST00000357475 CARNS1A5YM72 827 aa27.11■■□□□ 1.93
SSBP3-202ENST00000357475 LRRC53A6NM62 1247 aa27.11■■□□□ 1.93
SSBP3-202ENST00000357475 SOX1O00570 391 aaPredicted RBP27.11■■□□□ 1.93
SSBP3-202ENST00000357475 KRT5P13647 590 aa27.11■■□□□ 1.93
SSBP3-202ENST00000357475 GNL1P36915 607 aaPredicted RBP27.11■■□□□ 1.93
SSBP3-202ENST00000357475 ERVFC1P60507 584 aa27.11■■□□□ 1.93
SSBP3-202ENST00000357475 MRPL58Q14197 206 aaKnown RBP27.11■■□□□ 1.93
SSBP3-202ENST00000357475 TMEM86AQ8N2M4 240 aa27.11■■□□□ 1.93
SSBP3-202ENST00000357475 POF1BQ8WVV4 589 aa27.11■■□□□ 1.93
SSBP3-202ENST00000357475 RIN2Q8WYP3 895 aaPredicted RBP27.11■■□□□ 1.93
SSBP3-202ENST00000357475 ZBP1Q9H171 429 aa27.11■■□□□ 1.93
SSBP3-202ENST00000357475 SNX25Q9H3E2 840 aa27.11■■□□□ 1.93
SSBP3-202ENST00000357475 BARX2Q9UMQ3 279 aaPredicted RBP27.11■■□□□ 1.93
SSBP3-202ENST00000357475 STXBP5LQ9Y2K9 1186 aa27.11■■□□□ 1.93
SSBP3-202ENST00000357475 A0A1W2PQJ5 194 aa27.1■■□□□ 1.93
SSBP3-202ENST00000357475 RFXAPO00287 272 aa27.1■■□□□ 1.93
SSBP3-202ENST00000357475 ATP2C2O75185 946 aa27.1■■□□□ 1.93
SSBP3-202ENST00000357475 OAZ2O95190 189 aa27.1■■□□□ 1.93
SSBP3-202ENST00000357475 RB1P06400 928 aa27.1■■□□□ 1.93
SSBP3-202ENST00000357475 USP8P40818 1118 aa27.1■■□□□ 1.93
SSBP3-202ENST00000357475 RAD23BP54727 409 aa27.1■■□□□ 1.93
SSBP3-202ENST00000357475 ADKP55263 362 aaKnown RBP27.1■■□□□ 1.93
SSBP3-202ENST00000357475 CAMK1Q14012 370 aa27.1■■□□□ 1.93
SSBP3-202ENST00000357475 PDXDC1Q6P996 788 aa27.1■■□□□ 1.93
SSBP3-202ENST00000357475 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.1■■□□□ 1.93
SSBP3-202ENST00000357475 METTL23Q86XA0 190 aa27.1■■□□□ 1.93
SSBP3-202ENST00000357475 LNX1Q8TBB1 728 aaPredicted RBP27.1■■□□□ 1.93
SSBP3-202ENST00000357475 SAMD11Q96NU1 681 aa27.1■■□□□ 1.93
SSBP3-202ENST00000357475 SPAG5Q96R06 1193 aa27.1■■□□□ 1.93
SSBP3-202ENST00000357475 C11orf84Q9BUA3 381 aaPredicted RBP27.1■■□□□ 1.93
SSBP3-202ENST00000357475 DSEQ9UL01 958 aa27.1■■□□□ 1.93
SSBP3-202ENST00000357475 CNTN6Q9UQ52 1028 aa27.1■■□□□ 1.93
SSBP3-202ENST00000357475 A8MXQ7 604 aa27.09■■□□□ 1.93
SSBP3-202ENST00000357475 CYP26A1O43174 497 aa27.09■■□□□ 1.93
SSBP3-202ENST00000357475 GFPT2O94808 682 aa27.09■■□□□ 1.93
SSBP3-202ENST00000357475 RPL17P18621 184 aaKnown RBP27.09■■□□□ 1.93
SSBP3-202ENST00000357475 GLUD2P49448 558 aa27.09■■□□□ 1.93
SSBP3-202ENST00000357475 ZNF132P52740 706 aa27.09■■□□□ 1.93
SSBP3-202ENST00000357475 PSMC1P62191 440 aaKnown RBP27.09■■□□□ 1.93
SSBP3-202ENST00000357475 DSG1Q02413 1049 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms