RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 NFX1Q12986 1120 aaKnown RBP16.13■□□□□ 0.17
PTBP1-203ENST00000356948 MICALL2Q8IY33 904 aa16.13■□□□□ 0.17
PTBP1-203ENST00000356948 TMEM192Q8IY95 271 aa16.13■□□□□ 0.17
PTBP1-203ENST00000356948 IFT74Q96LB3 600 aa16.13■□□□□ 0.17
PTBP1-203ENST00000356948 TMEM237Q96Q45 408 aa16.13■□□□□ 0.17
PTBP1-203ENST00000356948 USP15Q9Y4E8 981 aaPredicted RBP16.13■□□□□ 0.17
PTBP1-203ENST00000356948 GAS8O95995 478 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 STX2P32856 288 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 BACE1P56817 501 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 PLCB3Q01970 1234 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 MSS51Q4VC12 460 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 ANKRD22Q5VYY1 191 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 TAOK1Q7L7X3 1001 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 C3orf20Q8ND61 904 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 SLC17A8Q8NDX2 589 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 MORC4Q8TE76 937 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 TRAPPC12Q8WVT3 735 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 PPP1R12CQ9BZL4 782 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 ZWILCHQ9H900 591 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 CNTNAP2Q9UHC6 1331 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 TCRBV7S3A2A0A539 114 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 MGRN1O60291 552 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 MAP3K6O95382 1288 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 PSAPP07602 524 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 CDH8P55286 799 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 NCOA4Q13772 614 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 PSMD6Q15008 389 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 ECHDC2Q86YB7 292 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 RTKN2Q8IZC4 609 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 ATP6V0A1Q93050 837 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 TCHPQ9BT92 498 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 DIAPH2O60879 1101 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 PLCB4Q15147 1175 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 CIAPIN1Q6FI81 312 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 RHOT1Q8IXI2 618 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 SERPINB12Q96P63 405 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 CYTH4Q9UIA0 394 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 AFG3L2Q9Y4W6 797 aa16.12■□□□□ 0.17
PTBP1-203ENST00000356948 KRT1P04264 644 aa16.11■□□□□ 0.17
PTBP1-203ENST00000356948 SLC8A1P32418 973 aa16.11■□□□□ 0.17
PTBP1-203ENST00000356948 RPA3P35244 121 aaPredicted RBP16.11■□□□□ 0.17
PTBP1-203ENST00000356948 GHRHRQ02643 423 aa16.11■□□□□ 0.17
PTBP1-203ENST00000356948 ZBED8Q8IZ13 594 aa16.11■□□□□ 0.17
PTBP1-203ENST00000356948 CKAP2Q8WWK9 683 aa16.11■□□□□ 0.17
PTBP1-203ENST00000356948 SLCO2A1Q92959 643 aa16.11■□□□□ 0.17
PTBP1-203ENST00000356948 RUNDC3BQ96NL0 473 aa16.11■□□□□ 0.17
PTBP1-203ENST00000356948 PCYT2Q99447 389 aa16.11■□□□□ 0.17
PTBP1-203ENST00000356948 HOMER3Q9NSC5 361 aa16.11■□□□□ 0.17
PTBP1-203ENST00000356948 G3BP2Q9UN86 482 aaKnown RBP16.11■□□□□ 0.17
PTBP1-203ENST00000356948 LGR5O75473 907 aa16.11■□□□□ 0.17
PTBP1-203ENST00000356948 DNAJC8O75937 253 aaPredicted RBP16.11■□□□□ 0.17
PTBP1-203ENST00000356948 TAC1P20366 129 aa16.11■□□□□ 0.17
PTBP1-203ENST00000356948 GARTP22102 1010 aa16.11■□□□□ 0.17
PTBP1-203ENST00000356948 SSTR1P30872 391 aa16.11■□□□□ 0.17
PTBP1-203ENST00000356948 ARFGAP1Q8N6T3 406 aa16.11■□□□□ 0.17
PTBP1-203ENST00000356948 JOSD2Q8TAC2 188 aa16.11■□□□□ 0.17
PTBP1-203ENST00000356948 DEPTORQ8TB45 409 aa16.11■□□□□ 0.17
PTBP1-203ENST00000356948 NSUN6Q8TEA1 469 aaKnown RBP16.11■□□□□ 0.17
PTBP1-203ENST00000356948 SLITRK1Q96PX8 696 aa16.11■□□□□ 0.17
PTBP1-203ENST00000356948 POLIQ9UNA4 740 aa16.11■□□□□ 0.17
PTBP1-203ENST00000356948 LRRD1A4D1F6 860 aa16.11■□□□□ 0.17
PTBP1-203ENST00000356948 LIASO43766 372 aa16.11■□□□□ 0.17
PTBP1-203ENST00000356948 PTPRAP18433 802 aa16.11■□□□□ 0.17
PTBP1-203ENST00000356948 IL1R2P27930 398 aa16.11■□□□□ 0.17
PTBP1-203ENST00000356948 STRN3Q13033 797 aa16.11■□□□□ 0.17
PTBP1-203ENST00000356948 CAPSQ13938 189 aa16.11■□□□□ 0.17
PTBP1-203ENST00000356948 EGFL6Q8IUX8 553 aa16.11■□□□□ 0.17
PTBP1-203ENST00000356948 FEZF2Q8TBJ5 459 aa16.11■□□□□ 0.17
PTBP1-203ENST00000356948 AGAP11Q8TF27 550 aa16.11■□□□□ 0.17
PTBP1-203ENST00000356948 CCDC134Q9H6E4 229 aa16.11■□□□□ 0.17
PTBP1-203ENST00000356948 KAT6AQ92794 2004 aa16.11■□□□□ 0.17
PTBP1-203ENST00000356948 SLC1A5Q15758 541 aa16.1■□□□□ 0.17
PTBP1-203ENST00000356948 PREPLQ4J6C6 727 aaPredicted RBP16.1■□□□□ 0.17
PTBP1-203ENST00000356948 CAPRIN2Q6IMN6 1127 aaKnown RBP16.1■□□□□ 0.17
PTBP1-203ENST00000356948 PLEKHA7Q6IQ23 1121 aa16.1■□□□□ 0.17
PTBP1-203ENST00000356948 DPH6Q7L8W6 267 aa16.1■□□□□ 0.17
PTBP1-203ENST00000356948 SPATA21Q7Z572 469 aa16.1■□□□□ 0.17
PTBP1-203ENST00000356948 AGBL3Q8NEM8 1001 aa16.1■□□□□ 0.17
PTBP1-203ENST00000356948 WDR83Q9BRX9 315 aaKnown RBP16.1■□□□□ 0.17
PTBP1-203ENST00000356948 VPS37BQ9H9H4 285 aa16.1■□□□□ 0.17
PTBP1-203ENST00000356948 KIAA1586Q9HCI6 787 aa16.1■□□□□ 0.17
PTBP1-203ENST00000356948 NXF1Q9UBU9 619 aaKnown RBP16.1■□□□□ 0.17
PTBP1-203ENST00000356948 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.1■□□□□ 0.17
PTBP1-203ENST00000356948 B4GALT5O43286 388 aa16.1■□□□□ 0.17
PTBP1-203ENST00000356948 GMPSP49915 693 aaPredicted RBP16.1■□□□□ 0.17
PTBP1-203ENST00000356948 ITIH4Q14624 930 aa16.1■□□□□ 0.17
PTBP1-203ENST00000356948 CCNG2Q16589 344 aa16.1■□□□□ 0.17
PTBP1-203ENST00000356948 SH3PXD2AQ5TCZ1 1133 aa16.1■□□□□ 0.17
PTBP1-203ENST00000356948 FKBP1CQ5VVH2 108 aa16.1■□□□□ 0.17
PTBP1-203ENST00000356948 GPAT2Q6NUI2 795 aa16.1■□□□□ 0.17
PTBP1-203ENST00000356948 MAML1Q92585 1016 aa16.1■□□□□ 0.17
PTBP1-203ENST00000356948 AVENQ9NQS1 362 aaPredicted RBP16.1■□□□□ 0.17
PTBP1-203ENST00000356948 PCSK1NQ9UHG2 260 aa16.1■□□□□ 0.17
PTBP1-203ENST00000356948 MCM8Q9UJA3 840 aa16.1■□□□□ 0.17
PTBP1-203ENST00000356948 EXOC1LA0A1B0GW35 172 aa16.1■□□□□ 0.17
PTBP1-203ENST00000356948 SUPT20HL2P0C7V6 817 aa16.1■□□□□ 0.17
PTBP1-203ENST00000356948 RFC1P35251 1148 aaPredicted RBP16.1■□□□□ 0.17
PTBP1-203ENST00000356948 CLUL1Q15846 466 aa16.1■□□□□ 0.17
PTBP1-203ENST00000356948 LY6KQ17RY6 165 aa16.1■□□□□ 0.17
PTBP1-203ENST00000356948 SUPT20HL1Q3ZLR7 823 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms