RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 LOC100653049A0A140TA62 436 aa13.19□□□□□ -0.3
BDNF-202ENST00000356660 K7ERI5 159 aa13.19□□□□□ -0.3
BDNF-202ENST00000356660 KRT34O76011 436 aa13.19□□□□□ -0.3
BDNF-202ENST00000356660 BGNP21810 368 aa13.19□□□□□ -0.3
BDNF-202ENST00000356660 WDR4P57081 412 aaKnown RBP13.19□□□□□ -0.3
BDNF-202ENST00000356660 MED21Q13503 144 aa13.19□□□□□ -0.3
BDNF-202ENST00000356660 MTMR1Q13613 665 aa13.19□□□□□ -0.3
BDNF-202ENST00000356660 SLC1A5Q15758 541 aa13.19□□□□□ -0.3
BDNF-202ENST00000356660 SMTNL2Q2TAL5 461 aa13.19□□□□□ -0.3
BDNF-202ENST00000356660 CIAPIN1Q6FI81 312 aa13.19□□□□□ -0.3
BDNF-202ENST00000356660 INPP5DQ92835 1189 aa13.19□□□□□ -0.3
BDNF-202ENST00000356660 STARD13Q9Y3M8 1113 aa13.19□□□□□ -0.3
BDNF-202ENST00000356660 PCDHA2Q9Y5H9 948 aa13.19□□□□□ -0.3
BDNF-202ENST00000356660 GZMAP12544 262 aa13.19□□□□□ -0.3
BDNF-202ENST00000356660 ABL2P42684 1182 aa13.19□□□□□ -0.3
BDNF-202ENST00000356660 POU5F1Q01860 360 aaKnown RBP13.19□□□□□ -0.3
BDNF-202ENST00000356660 ASPHQ12797 758 aa13.19□□□□□ -0.3
BDNF-202ENST00000356660 TFDP1Q14186 410 aa13.19□□□□□ -0.3
BDNF-202ENST00000356660 ATP13A4Q4VNC1 1196 aa13.19□□□□□ -0.3
BDNF-202ENST00000356660 CDC42EP5Q6NZY7 148 aa13.19□□□□□ -0.3
BDNF-202ENST00000356660 NUDCD3Q8IVD9 361 aa13.19□□□□□ -0.3
BDNF-202ENST00000356660 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.19□□□□□ -0.3
BDNF-202ENST00000356660 TBX3O15119 743 aa13.18□□□□□ -0.3
BDNF-202ENST00000356660 CFLARO15519 480 aa13.18□□□□□ -0.3
BDNF-202ENST00000356660 STAM2O75886 525 aa13.18□□□□□ -0.3
BDNF-202ENST00000356660 PAX3P23760 479 aa13.18□□□□□ -0.3
BDNF-202ENST00000356660 GSTT1P30711 240 aa13.18□□□□□ -0.3
BDNF-202ENST00000356660 ATXN3P54252 364 aaPredicted RBP13.18□□□□□ -0.3
BDNF-202ENST00000356660 TRIP10Q15642 601 aa13.18□□□□□ -0.3
BDNF-202ENST00000356660 CEP55Q53EZ4 464 aa13.18□□□□□ -0.3
BDNF-202ENST00000356660 SH2D4BQ5SQS7 431 aa13.18□□□□□ -0.3
BDNF-202ENST00000356660 DARS2Q6PI48 645 aaKnown RBP13.18□□□□□ -0.3
BDNF-202ENST00000356660 EPB41L4BQ9H329 900 aa13.18□□□□□ -0.3
BDNF-202ENST00000356660 KCNMB3Q9NPA1 279 aa13.18□□□□□ -0.3
BDNF-202ENST00000356660 ATP6V1B1P15313 513 aa13.18□□□□□ -0.3
BDNF-202ENST00000356660 MMEL1Q495T6 779 aa13.18□□□□□ -0.3
BDNF-202ENST00000356660 CWF19L1Q69YN2 538 aaKnown RBP13.18□□□□□ -0.3
BDNF-202ENST00000356660 PRPF39Q86UA1 669 aaKnown RBP13.18□□□□□ -0.3
BDNF-202ENST00000356660 RIBC1Q8N443 379 aaPredicted RBP13.18□□□□□ -0.3
BDNF-202ENST00000356660 RBM41Q96IZ5 413 aaKnown RBP13.18□□□□□ -0.3
BDNF-202ENST00000356660 ANKRD27Q96NW4 1050 aa13.18□□□□□ -0.3
BDNF-202ENST00000356660 MAGED2Q9UNF1 606 aaPredicted RBP13.18□□□□□ -0.3
BDNF-202ENST00000356660 TMEM150BA6NC51 233 aa13.18□□□□□ -0.3
BDNF-202ENST00000356660 F5H423 210 aaPredicted RBP13.18□□□□□ -0.3
BDNF-202ENST00000356660 PSMG1O95456 288 aa13.18□□□□□ -0.3
BDNF-202ENST00000356660 GNA15P30679 374 aa13.18□□□□□ -0.3
BDNF-202ENST00000356660 KIF22Q14807 665 aa13.18□□□□□ -0.3
BDNF-202ENST00000356660 KLHL38Q2WGJ6 581 aa13.18□□□□□ -0.3
BDNF-202ENST00000356660 CCDC92Q53HC0 331 aaPredicted RBP13.18□□□□□ -0.3
BDNF-202ENST00000356660 NME8Q8N427 588 aa13.18□□□□□ -0.3
BDNF-202ENST00000356660 SNRNP27Q8WVK2 155 aaKnown RBP13.18□□□□□ -0.3
BDNF-202ENST00000356660 HSPH1Q92598 858 aa13.18□□□□□ -0.3
BDNF-202ENST00000356660 FAM149B1Q96BN6 582 aa13.18□□□□□ -0.3
BDNF-202ENST00000356660 LRRC19Q9H756 370 aa13.18□□□□□ -0.3
BDNF-202ENST00000356660 TUFT1Q9NNX1 390 aa13.18□□□□□ -0.3
BDNF-202ENST00000356660 NRBP2Q9NSY0 501 aa13.18□□□□□ -0.3
BDNF-202ENST00000356660 DNPEPQ9ULA0 475 aa13.18□□□□□ -0.3
BDNF-202ENST00000356660 FAF1Q9UNN5 650 aaPredicted RBP13.18□□□□□ -0.3
BDNF-202ENST00000356660 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.17□□□□□ -0.3
BDNF-202ENST00000356660 RNF8O76064 485 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 SLITRK3O94933 977 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 STAMBPO95630 424 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 TNNC2P02585 160 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 GSTA2P09210 222 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 SKIV2L2P42285 1042 aaKnown RBP13.17□□□□□ -0.3
BDNF-202ENST00000356660 RAB27AP51159 221 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 GEMIN4P57678 1058 aaKnown RBP13.17□□□□□ -0.3
BDNF-202ENST00000356660 NFX1Q12986 1120 aaKnown RBP13.17□□□□□ -0.3
BDNF-202ENST00000356660 PTK7Q13308 1070 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 MTMR2Q13614 643 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 FASTKD3Q14CZ7 662 aaKnown RBP13.17□□□□□ -0.3
BDNF-202ENST00000356660 RASA2Q15283 850 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 PARP6Q2NL67 630 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 PPP4R1Q8TF05 950 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 POLR3CQ9BUI4 534 aaPredicted RBP13.17□□□□□ -0.3
BDNF-202ENST00000356660 ARL8BQ9NVJ2 186 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 PDP2Q9P2J9 529 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 TNS2Q63HR2 1409 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 COL1A1P02452 1464 aaPredicted RBP13.17□□□□□ -0.3
BDNF-202ENST00000356660 FCHO1O14526 889 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 HNRNPCL1O60812 293 aaKnown RBP13.17□□□□□ -0.3
BDNF-202ENST00000356660 EDF1O60869 148 aaKnown RBP13.17□□□□□ -0.3
BDNF-202ENST00000356660 HADHQ16836 314 aaKnown RBP13.17□□□□□ -0.3
BDNF-202ENST00000356660 FAM81AQ8TBF8 368 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 AGR3Q8TD06 166 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 PAFAH2Q99487 392 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 TMEM109Q9BVC6 243 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 FHDC1Q9C0D6 1143 aaPredicted RBP13.17□□□□□ -0.3
BDNF-202ENST00000356660 HOXD13P35453 343 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 SLC1A1P43005 524 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 DSG1Q02413 1049 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 PDE1CQ14123 709 aaPredicted RBP13.17□□□□□ -0.3
BDNF-202ENST00000356660 PLA2G4FQ68DD2 849 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 FOXR2Q6PJQ5 311 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 RINLQ6ZS11 566 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 TRABD2AQ86V40 505 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 KCTD6Q8NC69 237 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 RFWD2Q8NHY2 731 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 DCAF4Q8WV16 495 aa13.17□□□□□ -0.3
BDNF-202ENST00000356660 ZNF184Q99676 751 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms