RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 MRPL10Q7Z7H8 261 aaKnown RBP24.29■■□□□ 1.48
SCAMP3-202ENST00000355379 RASGEF1CQ8N431 466 aa24.29■■□□□ 1.48
SCAMP3-202ENST00000355379 ZNF560Q96MR9 790 aa24.29■■□□□ 1.48
SCAMP3-202ENST00000355379 SCINQ9Y6U3 715 aa24.29■■□□□ 1.48
SCAMP3-202ENST00000355379 CALB1P05937 261 aa24.28■■□□□ 1.48
SCAMP3-202ENST00000355379 MESDQ14696 234 aa24.28■■□□□ 1.48
SCAMP3-202ENST00000355379 PLEKHA7Q6IQ23 1121 aa24.28■■□□□ 1.48
SCAMP3-202ENST00000355379 MS4A14Q96JA4 679 aa24.28■■□□□ 1.48
SCAMP3-202ENST00000355379 TWNKQ96RR1 684 aa24.28■■□□□ 1.48
SCAMP3-202ENST00000355379 C11orf70Q9BRQ4 267 aa24.28■■□□□ 1.48
SCAMP3-202ENST00000355379 SEZ6LQ9BYH1 1024 aa24.28■■□□□ 1.48
SCAMP3-202ENST00000355379 WNT8AQ9H1J5 351 aa24.28■■□□□ 1.48
SCAMP3-202ENST00000355379 AGO3Q9H9G7 860 aaKnown RBP24.28■■□□□ 1.48
SCAMP3-202ENST00000355379 TRMT13Q9NUP7 481 aaKnown RBP24.28■■□□□ 1.48
SCAMP3-202ENST00000355379 PTCH2Q9Y6C5 1203 aa24.28■■□□□ 1.48
SCAMP3-202ENST00000355379 PPEF2O14830 753 aa24.27■■□□□ 1.48
SCAMP3-202ENST00000355379 ITGA4P13612 1032 aa24.27■■□□□ 1.48
SCAMP3-202ENST00000355379 CD19P15391 556 aa24.27■■□□□ 1.48
SCAMP3-202ENST00000355379 LRPAP1P30533 357 aa24.27■■□□□ 1.48
SCAMP3-202ENST00000355379 SSTR3P32745 418 aaPredicted RBP24.27■■□□□ 1.48
SCAMP3-202ENST00000355379 RAB27AP51159 221 aa24.27■■□□□ 1.48
SCAMP3-202ENST00000355379 DNA2P51530 1060 aa24.27■■□□□ 1.48
SCAMP3-202ENST00000355379 PAK2Q13177 524 aa24.27■■□□□ 1.48
SCAMP3-202ENST00000355379 DSC3Q14574 896 aa24.27■■□□□ 1.48
SCAMP3-202ENST00000355379 NT5C1AQ9BXI3 368 aa24.27■■□□□ 1.48
SCAMP3-202ENST00000355379 CARD9Q9H257 536 aa24.27■■□□□ 1.48
SCAMP3-202ENST00000355379 ANKZF1Q9H8Y5 726 aa24.27■■□□□ 1.48
SCAMP3-202ENST00000355379 GDAP2Q9NXN4 497 aa24.27■■□□□ 1.48
SCAMP3-202ENST00000355379 TTC7AQ9ULT0 858 aaPredicted RBP24.27■■□□□ 1.48
SCAMP3-202ENST00000355379 PADI3Q9ULW8 664 aa24.27■■□□□ 1.48
SCAMP3-202ENST00000355379 PHF24Q9UPV7 400 aa24.27■■□□□ 1.48
SCAMP3-202ENST00000355379 ZNF623O75123 536 aa24.26■■□□□ 1.47
SCAMP3-202ENST00000355379 CTNNA2P26232 953 aa24.26■■□□□ 1.47
SCAMP3-202ENST00000355379 NDST1P52848 882 aa24.26■■□□□ 1.47
SCAMP3-202ENST00000355379 LPIN1Q14693 890 aa24.26■■□□□ 1.47
SCAMP3-202ENST00000355379 CNGA2Q16280 664 aa24.26■■□□□ 1.47
SCAMP3-202ENST00000355379 MMS22LQ6ZRQ5 1243 aa24.26■■□□□ 1.47
SCAMP3-202ENST00000355379 MTERF4Q7Z6M4 381 aaKnown RBP24.26■■□□□ 1.47
SCAMP3-202ENST00000355379 WDTC1Q8N5D0 677 aa24.26■■□□□ 1.47
SCAMP3-202ENST00000355379 UBL4BQ8N7F7 174 aa24.26■■□□□ 1.47
SCAMP3-202ENST00000355379 PPP1R10Q96QC0 940 aaKnown RBP24.26■■□□□ 1.47
SCAMP3-202ENST00000355379 PARD6BQ9BYG5 372 aa24.26■■□□□ 1.47
SCAMP3-202ENST00000355379 ARGLU1Q9NWB6 273 aaPredicted RBP24.26■■□□□ 1.47
SCAMP3-202ENST00000355379 CHORDC1Q9UHD1 332 aaPredicted RBP24.26■■□□□ 1.47
SCAMP3-202ENST00000355379 GIT1Q9Y2X7 761 aa24.26■■□□□ 1.47
SCAMP3-202ENST00000355379 TRIM17Q9Y577 477 aa24.26■■□□□ 1.47
SCAMP3-202ENST00000355379 SNX9Q9Y5X1 595 aa24.26■■□□□ 1.47
SCAMP3-202ENST00000355379 A0A0U1RQG5 324 aaPredicted RBP24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 A0A1W2PQ45 241 aaPredicted RBP24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 A0A1W2PQY0 241 aa24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 PTGESO14684 152 aa24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 COMTP21964 271 aa24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 RBM10P98175 930 aaKnown RBP24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 C2orf54Q08AI8 447 aa24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 STILQ15468 1287 aa24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 SV2CQ496J9 727 aa24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 DENND1BQ6P3S1 775 aa24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 FBXO38Q6PIJ6 1188 aa24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 UNC93AQ86WB7 457 aa24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 PDCL2Q8N4E4 241 aa24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 C1orf131Q8NDD1 294 aaKnown RBP24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 CD101Q93033 1021 aa24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.25■■□□□ 1.473e-8■■■■■ 46.9
SCAMP3-202ENST00000355379 EPC1Q9H2F5 836 aa24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 SLC38A7Q9NVC3 462 aa24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 PARVAQ9NVD7 372 aa24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 EHD2Q9NZN4 543 aa24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 HMGXB4Q9UGU5 601 aa24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 LCMT1Q9UIC8 334 aa24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 ANAPC7Q9UJX3 599 aa24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 RAB21Q9UL25 225 aa24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 TARSL2A2RTX5 802 aaKnown RBP24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 TMEM110-MUSTN1A8MSY1 372 aa24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 CEP104O60308 925 aa24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 CD52P31358 61 aa24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 SLC1A1P43005 524 aa24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 CLUL1Q15846 466 aa24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 PTPROQ16827 1216 aa24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 SGO2Q562F6 1265 aa24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 CCDC70Q6NSX1 233 aa24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 STARD7Q9NQZ5 370 aa24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.25■■□□□ 1.47
SCAMP3-202ENST00000355379 FAM163BP0C2L3 166 aa24.24■■□□□ 1.47
SCAMP3-202ENST00000355379 GHRP10912 638 aa24.24■■□□□ 1.47
SCAMP3-202ENST00000355379 SKIP12755 728 aa24.24■■□□□ 1.47
SCAMP3-202ENST00000355379 TAF6P49848 677 aa24.24■■□□□ 1.47
SCAMP3-202ENST00000355379 SOX4Q06945 474 aaPredicted RBP24.24■■□□□ 1.47
SCAMP3-202ENST00000355379 MAMLD1Q13495 774 aa24.24■■□□□ 1.47
SCAMP3-202ENST00000355379 LIMS2Q7Z4I7 341 aa24.24■■□□□ 1.47
SCAMP3-202ENST00000355379 ERICH1Q86X53 443 aa24.24■■□□□ 1.47
SCAMP3-202ENST00000355379 HEXIM2Q96MH2 286 aaKnown RBP24.24■■□□□ 1.47
SCAMP3-202ENST00000355379 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.24■■□□□ 1.477e-9■□□□□ 11.3
SCAMP3-202ENST00000355379 SMARCAL1Q9NZC9 954 aa24.24■■□□□ 1.47
SCAMP3-202ENST00000355379 TMEM59LQ9UK28 342 aa24.24■■□□□ 1.47
SCAMP3-202ENST00000355379 STRIP2Q9ULQ0 834 aa24.24■■□□□ 1.47
SCAMP3-202ENST00000355379 CCDC66A2RUB6 948 aa24.23■■□□□ 1.47
SCAMP3-202ENST00000355379 KPNA7A9QM74 516 aa24.23■■□□□ 1.47
SCAMP3-202ENST00000355379 KBTBD13C9JR72 458 aa24.23■■□□□ 1.47
SCAMP3-202ENST00000355379 MYO1FO00160 1098 aa24.23■■□□□ 1.47
SCAMP3-202ENST00000355379 PGRMC1O00264 195 aaKnown RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms