RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 KNOP1Q1ED39 458 aaKnown RBP8.36□□□□□ -1.07
HTT-201ENST00000355072 SNX30Q5VWJ9 437 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 FLAD1Q8NFF5 587 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 TCEANC2Q96MN5 208 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 MAP3K20Q9NYL2 800 aaKnown RBP8.36□□□□□ -1.07
HTT-201ENST00000355072 PNMA6FA0A0J9YX94 578 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 CFLARO15519 480 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 TOM1O60784 492 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 CRKP46108 304 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 TRAF3Q13114 568 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 XKR9Q5GH70 373 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 TMEM63BQ5T3F8 832 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 LRRC74BQ6ZQY2 392 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 TMPRSS6Q8IU80 811 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 SCUBE1Q8IWY4 988 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 CDH3P22223 829 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 IFNGR2P38484 337 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 CYP4Z2PQ8N1L4 340 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 TMCO6Q96DC7 493 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 RGS18Q9NS28 235 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 PARP3Q9Y6F1 533 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 APOL1O14791 398 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 SLC22A2O15244 555 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 RGS5O15539 181 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 ITGA10O75578 1167 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 SNRPAP09012 282 aaKnown RBP8.36□□□□□ -1.07
HTT-201ENST00000355072 ERP29P30040 261 aaKnown RBP8.36□□□□□ -1.07
HTT-201ENST00000355072 ARHGEF6Q15052 776 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 MZT2AQ6P582 158 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 KYAT3Q6YP21 454 aaKnown RBP8.36□□□□□ -1.07
HTT-201ENST00000355072 PPHLN1Q8NEY8 458 aaKnown RBP8.36□□□□□ -1.07
HTT-201ENST00000355072 ZNF518BQ9C0D4 1074 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 KMT5AQ9NQR1 393 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 DCTN4Q9UJW0 460 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 G3BP2Q9UN86 482 aaKnown RBP8.36□□□□□ -1.07
HTT-201ENST00000355072 C5orf58C9J3I9 102 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 ACLYP53396 1101 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 DPP10Q8N608 796 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 OMA1Q96E52 524 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 MAD2L2Q9UI95 211 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 INO80DQ53TQ3 878 aaPredicted RBP8.36□□□□□ -1.07
HTT-201ENST00000355072 CCNYQ8ND76 341 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 RNPEPL1Q9HAU8 725 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 MAPK8IP1Q9UQF2 711 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 FLT1P17948 1338 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 CDHR2Q9BYE9 1310 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 MAPK7Q13164 816 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 ITGADQ13349 1161 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 PRPF39Q86UA1 669 aaKnown RBP8.36□□□□□ -1.07
HTT-201ENST00000355072 PPIL6Q8IXY8 311 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 HSPH1Q92598 858 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 MIEF2Q96C03 454 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 SERHL2Q9H4I8 314 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 ZBTB3Q9H5J0 574 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 SLC39A2Q9NP94 309 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 SERHLQ9NQF3 203 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 SEC14L4Q9UDX3 406 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 C3orf18Q9UK00 162 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 GSTK1Q9Y2Q3 226 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 NBPF26B4DH59 902 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 STAT3P40763 770 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 ADARP55265 1226 aaKnown RBP8.36□□□□□ -1.07
HTT-201ENST00000355072 TFDP3Q5H9I0 405 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 NBPF15Q8N660 670 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 RFT1Q96AA3 541 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 FUT8Q9BYC5 575 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 BLZF1Q9H2G9 400 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 NOD1Q9Y239 953 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 CCDC182A6NF36 153 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 LRRC53A6NM62 1247 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 CCDC85BQ15834 202 aaPredicted RBP8.36□□□□□ -1.07
HTT-201ENST00000355072 ZNF513Q8N8E2 541 aaPredicted RBP8.36□□□□□ -1.07
HTT-201ENST00000355072 SAYSD1Q9NPB0 183 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 LDOC1O95751 146 aaPredicted RBP8.35□□□□□ -1.07
HTT-201ENST00000355072 S100A6P06703 90 aa8.35□□□□□ -1.07
HTT-201ENST00000355072 C12orf60Q5U649 245 aa8.35□□□□□ -1.07
HTT-201ENST00000355072 C11orf57Q6ZUT1 292 aaPredicted RBP8.35□□□□□ -1.07
HTT-201ENST00000355072 FBXO11Q86XK2 927 aa8.35□□□□□ -1.07
HTT-201ENST00000355072 TMEM126BQ8IUX1 230 aa8.35□□□□□ -1.07
HTT-201ENST00000355072 TNIP3Q96KP6 325 aa8.35□□□□□ -1.07
HTT-201ENST00000355072 HBS1LQ9Y450 684 aaKnown RBP8.35□□□□□ -1.07
HTT-201ENST00000355072 UBXN8O00124 270 aa8.35□□□□□ -1.07
HTT-201ENST00000355072 FAUP35544 74 aaKnown RBP8.35□□□□□ -1.07
HTT-201ENST00000355072 NR2C2P49116 596 aa8.35□□□□□ -1.07
HTT-201ENST00000355072 TUFMP49411 452 aaKnown RBP8.35□□□□□ -1.07
HTT-201ENST00000355072 SARSP49591 514 aaKnown RBP8.35□□□□□ -1.07
HTT-201ENST00000355072 NCALDP61601 193 aa8.35□□□□□ -1.07
HTT-201ENST00000355072 BNC2Q6ZN30 1099 aaPredicted RBP8.35□□□□□ -1.07
HTT-201ENST00000355072 TRIM39Q9HCM9 518 aa8.35□□□□□ -1.07
HTT-201ENST00000355072 KCNK4Q9NYG8 393 aa8.35□□□□□ -1.07
HTT-201ENST00000355072 FBXO40Q9UH90 709 aa8.35□□□□□ -1.07
HTT-201ENST00000355072 ZC3H11AO75152 810 aaKnown RBP eCLIP8.35□□□□□ -1.07
HTT-201ENST00000355072 SYCE2Q6PIF2 218 aa8.35□□□□□ -1.07
HTT-201ENST00000355072 C1orf228Q6PIY5 440 aa8.35□□□□□ -1.07
HTT-201ENST00000355072 ARCQ7LC44 396 aa8.35□□□□□ -1.07
HTT-201ENST00000355072 PAGE5Q96GU1 130 aa8.35□□□□□ -1.07
HTT-201ENST00000355072 GORASP1Q9BQQ3 440 aa8.35□□□□□ -1.07
HTT-201ENST00000355072 ATXN10Q9UBB4 475 aa8.35□□□□□ -1.07
HTT-201ENST00000355072 ERCC2P18074 760 aa8.35□□□□□ -1.07
HTT-201ENST00000355072 RPL26P61254 145 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms