RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 HUS1O60921 280 aa16.62■□□□□ 0.25
CTSA-202ENST00000354880 TACC1O75410 805 aa16.62■□□□□ 0.25
CTSA-202ENST00000354880 BRD2P25440 801 aaKnown RBP16.62■□□□□ 0.25
CTSA-202ENST00000354880 GALCP54803 685 aa16.62■□□□□ 0.25
CTSA-202ENST00000354880 CLEC16AQ2KHT3 1053 aa16.62■□□□□ 0.25
CTSA-202ENST00000354880 SYT10Q6XYQ8 523 aa16.62■□□□□ 0.25
CTSA-202ENST00000354880 TRIM72Q6ZMU5 477 aa16.62■□□□□ 0.25
CTSA-202ENST00000354880 DPH6Q7L8W6 267 aa16.62■□□□□ 0.25
CTSA-202ENST00000354880 LIMS2Q7Z4I7 341 aa16.62■□□□□ 0.25
CTSA-202ENST00000354880 UBE2Q1Q7Z7E8 422 aa16.62■□□□□ 0.25
CTSA-202ENST00000354880 ABI1Q8IZP0 508 aa16.62■□□□□ 0.25
CTSA-202ENST00000354880 TOP6BLQ8N6T0 577 aa16.62■□□□□ 0.25
CTSA-202ENST00000354880 APPL2Q8NEU8 664 aa16.62■□□□□ 0.25
CTSA-202ENST00000354880 SECISBP2LQ93073 1101 aaKnown RBP16.62■□□□□ 0.25
CTSA-202ENST00000354880 TRIM43Q96BQ3 446 aaPredicted RBP16.62■□□□□ 0.25
CTSA-202ENST00000354880 PAAF1Q9BRP4 392 aa16.62■□□□□ 0.25
CTSA-202ENST00000354880 NT5C1AQ9BXI3 368 aa16.62■□□□□ 0.25
CTSA-202ENST00000354880 RNF216Q9NWF9 866 aaPredicted RBP16.62■□□□□ 0.25
CTSA-202ENST00000354880 MICAL3Q7RTP6 2002 aa16.62■□□□□ 0.25
CTSA-202ENST00000354880 ANKRD62A6NC57 917 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 FTLP02792 175 aaPredicted RBP16.61■□□□□ 0.25
CTSA-202ENST00000354880 UNGP13051 313 aaPredicted RBP16.61■□□□□ 0.25
CTSA-202ENST00000354880 CD19P15391 556 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 RAG1P15918 1043 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 IGFBP6P24592 240 aaPredicted RBP16.61■□□□□ 0.25
CTSA-202ENST00000354880 ITGB8P26012 769 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 ORC1Q13415 861 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 IKBKEQ14164 716 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 CRIPAKQ8N1N5 446 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 C3orf58Q8NDZ4 430 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 TFAP2BQ92481 460 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 L1RE1Q9UN81 338 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 BTNL10A8MVZ5 291 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 CYB561D2O14569 222 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 HOXA2O43364 376 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 MED7O43513 233 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 CYP1A1P04798 512 aaPredicted RBP16.61■□□□□ 0.25
CTSA-202ENST00000354880 CFHP08603 1231 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 TMEM253P0C7T8 217 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 ZNF569Q5MCW4 686 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 UNC93AQ86WB7 457 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 OR6B3Q8NGW1 331 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 KBTBD7Q8WVZ9 684 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 CTNNBL1Q8WYA6 563 aaPredicted RBP16.61■□□□□ 0.25
CTSA-202ENST00000354880 ZNF592Q92610 1267 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 RABGGTAQ92696 567 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 VWCEQ96DN2 955 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 CYFIP2Q96F07 1278 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 SENP8Q96LD8 212 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 ZSWIM1Q9BR11 485 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 TBC1D13Q9NVG8 400 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 SALL4Q9UJQ4 1053 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 KIAA1257Q9ULG3 409 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 PCDHGC3Q9UN70 934 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 PAXBP1Q9Y5B6 917 aa16.61■□□□□ 0.25
CTSA-202ENST00000354880 FAM170AA1A519 330 aa16.6■□□□□ 0.25
CTSA-202ENST00000354880 B3GAT3O94766 335 aa16.6■□□□□ 0.25
CTSA-202ENST00000354880 FAM163BP0C2L3 166 aa16.6■□□□□ 0.25
CTSA-202ENST00000354880 ABCB4P21439 1286 aa16.6■□□□□ 0.25
CTSA-202ENST00000354880 AARSP49588 968 aaKnown RBP eCLIP16.6■□□□□ 0.25
CTSA-202ENST00000354880 CENPCQ03188 943 aa16.6■□□□□ 0.25
CTSA-202ENST00000354880 RNASELQ05823 741 aaKnown RBP16.6■□□□□ 0.25
CTSA-202ENST00000354880 DSC1Q08554 894 aa16.6■□□□□ 0.25
CTSA-202ENST00000354880 ACAD10Q6JQN1 1059 aa16.6■□□□□ 0.25
CTSA-202ENST00000354880 ZNF280BQ86YH2 543 aa16.6■□□□□ 0.25
CTSA-202ENST00000354880 NPAS4Q8IUM7 802 aa16.6■□□□□ 0.25
CTSA-202ENST00000354880 ADGRF2Q8IZF7 708 aa16.6■□□□□ 0.25
CTSA-202ENST00000354880 RNF10Q8N5U6 811 aaKnown RBP16.6■□□□□ 0.25
CTSA-202ENST00000354880 HEXIM2Q96MH2 286 aaKnown RBP16.6■□□□□ 0.25
CTSA-202ENST00000354880 WDR24Q96S15 920 aa16.6■□□□□ 0.25
CTSA-202ENST00000354880 DNAI1Q9UI46 699 aa16.6■□□□□ 0.25
CTSA-202ENST00000354880 A8MXQ7 604 aa16.59■□□□□ 0.25
CTSA-202ENST00000354880 DDHD2O94830 711 aa16.59■□□□□ 0.25
CTSA-202ENST00000354880 VDRP11473 427 aa16.59■□□□□ 0.25
CTSA-202ENST00000354880 PAX3P23760 479 aa16.59■□□□□ 0.25
CTSA-202ENST00000354880 SSTR3P32745 418 aaPredicted RBP16.59■□□□□ 0.25
CTSA-202ENST00000354880 GNL1P36915 607 aaPredicted RBP16.59■□□□□ 0.25
CTSA-202ENST00000354880 NOMO3P69849 1222 aa16.59■□□□□ 0.25
CTSA-202ENST00000354880 NAA35Q5VZE5 725 aa16.59■□□□□ 0.25
CTSA-202ENST00000354880 MFSD5Q6N075 450 aa16.59■□□□□ 0.25
CTSA-202ENST00000354880 DSTYKQ6XUX3 929 aa16.59■□□□□ 0.25
CTSA-202ENST00000354880 PASD1Q8IV76 773 aa16.59■□□□□ 0.25
CTSA-202ENST00000354880 PDCL2Q8N4E4 241 aa16.59■□□□□ 0.25
CTSA-202ENST00000354880 TMEM199Q8N511 208 aa16.59■□□□□ 0.25
CTSA-202ENST00000354880 KIF18AQ8NI77 898 aa16.59■□□□□ 0.25
CTSA-202ENST00000354880 CPA5Q8WXQ8 436 aa16.59■□□□□ 0.25
CTSA-202ENST00000354880 CASD1Q96PB1 797 aa16.59■□□□□ 0.25
CTSA-202ENST00000354880 FAM193BQ96PV7 902 aaPredicted RBP16.59■□□□□ 0.25
CTSA-202ENST00000354880 THAP2Q9H0W7 228 aa16.59■□□□□ 0.25
CTSA-202ENST00000354880 SNX25Q9H3E2 840 aa16.59■□□□□ 0.25
CTSA-202ENST00000354880 A0A0A6YYK5 440 aaPredicted RBP16.59■□□□□ 0.25
CTSA-202ENST00000354880 LSM8O95777 96 aaKnown RBP16.59■□□□□ 0.25
CTSA-202ENST00000354880 CSF2RAP15509 400 aa16.59■□□□□ 0.25
CTSA-202ENST00000354880 WARSP23381 471 aaKnown RBP16.59■□□□□ 0.25
CTSA-202ENST00000354880 NSFP46459 744 aaKnown RBP16.59■□□□□ 0.25
CTSA-202ENST00000354880 NAP1L1P55209 391 aaKnown RBP16.59■□□□□ 0.25
CTSA-202ENST00000354880 SGO2Q562F6 1265 aa16.59■□□□□ 0.25
CTSA-202ENST00000354880 PPP1R2P3Q6NXS1 205 aa16.59■□□□□ 0.25
CTSA-202ENST00000354880 DCLRE1AQ6PJP8 1040 aa16.59■□□□□ 0.25
CTSA-202ENST00000354880 COLGALT2Q8IYK4 626 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms