RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 VPS37BQ9H9H4 285 aa12.04□□□□□ -0.48
CAPN9-202ENST00000354537 DDX56Q9NY93 547 aaKnown RBP12.04□□□□□ -0.48
CAPN9-202ENST00000354537 ZMYND8Q9ULU4 1186 aaPredicted RBP12.04□□□□□ -0.48
CAPN9-202ENST00000354537 ZNF148Q9UQR1 794 aa12.04□□□□□ -0.48
CAPN9-202ENST00000354537 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.04□□□□□ -0.48
CAPN9-202ENST00000354537 SIGLEC16A6NMB1 481 aa12.04□□□□□ -0.48
CAPN9-202ENST00000354537 DDX39AO00148 427 aaKnown RBP12.04□□□□□ -0.48
CAPN9-202ENST00000354537 TLR3O15455 904 aaKnown RBP12.04□□□□□ -0.48
CAPN9-202ENST00000354537 SKIP12755 728 aa12.04□□□□□ -0.48
CAPN9-202ENST00000354537 ACO1P21399 889 aaKnown RBP12.04□□□□□ -0.48
CAPN9-202ENST00000354537 SARNPP82979 210 aaKnown RBP12.04□□□□□ -0.48
CAPN9-202ENST00000354537 GPS1Q13098 491 aa12.04□□□□□ -0.48
CAPN9-202ENST00000354537 FAM102BQ5T8I3 360 aa12.04□□□□□ -0.48
CAPN9-202ENST00000354537 ZNF449Q6P9G9 518 aa12.04□□□□□ -0.48
CAPN9-202ENST00000354537 EP400NLQ6ZTU2 488 aa12.04□□□□□ -0.48
CAPN9-202ENST00000354537 CHSY1Q86X52 802 aa12.04□□□□□ -0.48
CAPN9-202ENST00000354537 MFN1Q8IWA4 741 aa12.04□□□□□ -0.48
CAPN9-202ENST00000354537 ZNF276Q8N554 614 aa12.04□□□□□ -0.48
CAPN9-202ENST00000354537 MAK16Q9BXY0 300 aaKnown RBP12.04□□□□□ -0.48
CAPN9-202ENST00000354537 KMT5AQ9NQR1 393 aa12.04□□□□□ -0.48
CAPN9-202ENST00000354537 DENND3A2RUS2 1198 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 A8MXQ7 604 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 HGSO14964 777 aaPredicted RBP12.03□□□□□ -0.48
CAPN9-202ENST00000354537 GSC2O15499 205 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 CBX6O95503 412 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 MYCNP04198 464 aaPredicted RBP12.03□□□□□ -0.48
CAPN9-202ENST00000354537 ICAM1P05362 532 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 TAP1Q03518 808 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 CBLBQ13191 982 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 PSMD6Q15008 389 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 SEPT7Q16181 437 aaKnown RBP12.03□□□□□ -0.48
CAPN9-202ENST00000354537 MUM1Q2TAK8 710 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 TRIM68Q6AZZ1 485 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 CC2D2BQ6DHV5 1058 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 SLC39A4Q6P5W5 647 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 SLC30A9Q6PML9 568 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 MTDHQ86UE4 582 aaKnown RBP12.03□□□□□ -0.48
CAPN9-202ENST00000354537 C4orf33Q8N1A6 199 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 ATP11CQ8NB49 1132 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 POMGNT1Q8WZA1 660 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 TSC22D3Q99576 134 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 CADM1Q9BY67 442 aaKnown RBP12.03□□□□□ -0.48
CAPN9-202ENST00000354537 TRIM55Q9BYV6 548 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 FHDC1Q9C0D6 1143 aaPredicted RBP12.03□□□□□ -0.48
CAPN9-202ENST00000354537 TOPORSQ9NS56 1045 aaPredicted RBP12.03□□□□□ -0.48
CAPN9-202ENST00000354537 RABGEF1Q9UJ41 708 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 DNPEPQ9ULA0 475 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 POLIQ9UNA4 740 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 ANKRD33BA6NCL7 494 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 E7ESA3 106 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 HAUS5O94927 633 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 MXRA7P84157 204 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 KRT76Q01546 638 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 SLC34A1Q06495 639 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 NBPF20Q3BBV1 942 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 ZACNQ401N2 412 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 SPOCD1Q6ZMY3 1216 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 ZBED8Q8IZ13 594 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 ARHGAP24Q8N264 748 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.03□□□□□ -0.48
CAPN9-202ENST00000354537 BANPQ8N9N5 519 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 TTC8Q8TAM2 541 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 TRAPPC9Q96Q05 1148 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 YIPF3Q9GZM5 350 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 ACSS3Q9H6R3 686 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 SYNCQ9H7C4 482 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.03□□□□□ -0.48
CAPN9-202ENST00000354537 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.03□□□□□ -0.48
CAPN9-202ENST00000354537 FARP1Q9Y4F1 1045 aaPredicted RBP12.03□□□□□ -0.48
CAPN9-202ENST00000354537 SNCAIPQ9Y6H5 919 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 SLX4Q8IY92 1834 aa12.03□□□□□ -0.48
CAPN9-202ENST00000354537 A0A1W2PPM1 405 aa12.02□□□□□ -0.48
CAPN9-202ENST00000354537 TMEM191CA6NGB0 347 aa12.02□□□□□ -0.48
CAPN9-202ENST00000354537 WDR64B1ANS9 1081 aa12.02□□□□□ -0.48
CAPN9-202ENST00000354537 EXTL3O43909 919 aa12.02□□□□□ -0.48
CAPN9-202ENST00000354537 DKC1O60832 514 aaKnown RBP eCLIP12.02□□□□□ -0.48
CAPN9-202ENST00000354537 ENTPD5O75356 428 aa12.02□□□□□ -0.48
CAPN9-202ENST00000354537 FAM155BO75949 473 aa12.02□□□□□ -0.48
CAPN9-202ENST00000354537 TMEM191BP0C7N4 346 aa12.02□□□□□ -0.48
CAPN9-202ENST00000354537 KRT4P19013 534 aa12.02□□□□□ -0.48
CAPN9-202ENST00000354537 CD58P19256 250 aa12.02□□□□□ -0.48
CAPN9-202ENST00000354537 TBXAS1P24557 533 aaPredicted RBP12.02□□□□□ -0.48
CAPN9-202ENST00000354537 CDC25CP30307 473 aa12.02□□□□□ -0.48
CAPN9-202ENST00000354537 DSG3P32926 999 aa12.02□□□□□ -0.48
CAPN9-202ENST00000354537 ARL4CP56559 192 aa12.02□□□□□ -0.48
CAPN9-202ENST00000354537 PDIA2Q13087 525 aaKnown RBP12.02□□□□□ -0.48
CAPN9-202ENST00000354537 RBBP5Q15291 538 aaKnown RBP12.02□□□□□ -0.48
CAPN9-202ENST00000354537 MAPK6Q16659 721 aa12.02□□□□□ -0.48
CAPN9-202ENST00000354537 XKR9Q5GH70 373 aa12.02□□□□□ -0.48
CAPN9-202ENST00000354537 PPIL6Q8IXY8 311 aa12.02□□□□□ -0.48
CAPN9-202ENST00000354537 SPDYE1Q8NFV5 336 aaPredicted RBP12.02□□□□□ -0.48
CAPN9-202ENST00000354537 MZB1Q8WU39 189 aa12.02□□□□□ -0.48
CAPN9-202ENST00000354537 CSRNP1Q96S65 589 aa12.02□□□□□ -0.48
CAPN9-202ENST00000354537 MIPEPQ99797 713 aa12.02□□□□□ -0.48
CAPN9-202ENST00000354537 C11orf70Q9BRQ4 267 aa12.02□□□□□ -0.48
CAPN9-202ENST00000354537 CCDC28BQ9BUN5 200 aa12.02□□□□□ -0.48
CAPN9-202ENST00000354537 MANSC1Q9H8J5 431 aa12.02□□□□□ -0.48
CAPN9-202ENST00000354537 GPRC5CQ9NQ84 441 aa12.02□□□□□ -0.48
CAPN9-202ENST00000354537 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.02□□□□□ -0.48
CAPN9-202ENST00000354537 KANSL3Q9P2N6 904 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms