RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 RTL10Q7L3V2 364 aa12.44□□□□□ -0.42
CDRT1-202ENST00000354433 ZNF720Q7Z2F6 126 aa12.44□□□□□ -0.42
CDRT1-202ENST00000354433 SMYD4Q8IYR2 804 aaPredicted RBP12.44□□□□□ -0.42
CDRT1-202ENST00000354433 SYCP3Q8IZU3 236 aa12.44□□□□□ -0.42
CDRT1-202ENST00000354433 ITFG1Q8TB96 612 aa12.44□□□□□ -0.42
CDRT1-202ENST00000354433 NELFBQ8WX92 580 aa12.44□□□□□ -0.42
CDRT1-202ENST00000354433 HVCN1Q96D96 273 aa12.44□□□□□ -0.42
CDRT1-202ENST00000354433 ST6GALNAC4Q9H4F1 302 aa12.44□□□□□ -0.42
CDRT1-202ENST00000354433 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.44□□□□□ -0.42
CDRT1-202ENST00000354433 DNMT3BQ9UBC3 853 aaKnown RBP12.44□□□□□ -0.42
CDRT1-202ENST00000354433 CTNND2Q9UQB3 1225 aa12.44□□□□□ -0.42
CDRT1-202ENST00000354433 BICDL2A1A5D9 508 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 ZNF500O60304 480 aaPredicted RBP12.43□□□□□ -0.42
CDRT1-202ENST00000354433 RHOP08100 348 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 POU2F2P09086 479 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 ODC1P11926 461 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 EHHADHQ08426 723 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 TCF15Q12870 199 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 HTR4Q13639 388 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 TPD52L1Q16890 204 aaPredicted RBP12.43□□□□□ -0.42
CDRT1-202ENST00000354433 CWF19L1Q69YN2 538 aaKnown RBP12.43□□□□□ -0.42
CDRT1-202ENST00000354433 ASTLQ6HA08 431 aaPredicted RBP12.43□□□□□ -0.42
CDRT1-202ENST00000354433 IQCEQ6IPM2 695 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 PARM1Q6UWI2 310 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 MTSS1LQ765P7 747 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 CCDC186Q7Z3E2 898 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 SLC44A3Q8N4M1 653 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 TMEM105Q8N8V8 129 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 FGF14Q92915 247 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 DNAJC19Q96DA6 116 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 PGLYRP2Q96PD5 576 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 ACCSQ96QU6 501 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 TSPAN18Q96SJ8 248 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 CORO1BQ9BR76 489 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 IKZF4Q9H2S9 585 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 PANK4Q9NVE7 773 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 FAM86C1Q9NVL1 165 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 INSL5Q9Y5Q6 135 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 TRIP11Q15643 1979 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 PPEF2O14830 753 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 ABLIM3O94929 683 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 OR4Q2P0C623 313 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 CLCN1P35523 988 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 KCNA1Q09470 495 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 MRPL58Q14197 206 aaKnown RBP12.43□□□□□ -0.42
CDRT1-202ENST00000354433 ZBTB6Q15916 424 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 TPGS2Q68CL5 300 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 OVOS1Q6IE37 1185 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 PDZD4Q76G19 769 aaPredicted RBP12.43□□□□□ -0.42
CDRT1-202ENST00000354433 NPAS3Q8IXF0 933 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 GPR152Q8TDT2 470 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 ATOH1Q92858 354 aaPredicted RBP12.43□□□□□ -0.42
CDRT1-202ENST00000354433 ASB7Q9H672 318 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 OLFML3Q9NRN5 406 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 SAMSN1Q9NSI8 373 aaKnown RBP12.43□□□□□ -0.42
CDRT1-202ENST00000354433 AFF4Q9UHB7 1163 aaKnown RBP12.43□□□□□ -0.42
CDRT1-202ENST00000354433 PCDHB13Q9Y5F0 798 aa12.43□□□□□ -0.42
CDRT1-202ENST00000354433 KMT2EQ8IZD2 1858 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 A0A1B0GTH6 734 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 ARHGEF37A1IGU5 675 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 FRMD3A2A2Y4 597 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 LRRC10BA6NIK2 292 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 H0Y858 1186 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 M0QZQ0 153 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 TBC1D4O60343 1298 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 PPP1R37O75864 691 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 SEC24AO95486 1093 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 PTPN2P17706 415 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 CCNE1P24864 410 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 AARSP49588 968 aaKnown RBP eCLIP12.42□□□□□ -0.42
CDRT1-202ENST00000354433 CLCN5P51795 746 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 CASP5P51878 434 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 STX17P56962 302 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 TWF1Q12792 350 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 ALCAMQ13740 583 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 C9orf57Q5W0N0 161 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 VSTM4Q8IW00 320 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 CCDC65Q8IXS2 484 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 TCEAL8Q8IYN2 117 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 GUF1Q8N442 669 aaKnown RBP12.42□□□□□ -0.42
CDRT1-202ENST00000354433 ANKRD20A12PQ8NF67 263 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 SAAL1Q96ER3 474 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 MCRS1Q96EZ8 462 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 KXD1Q9BQD3 176 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 FAM213AQ9BRX8 229 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 THAP9Q9H5L6 903 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 ARHGEF3Q9NR81 526 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 WNT16Q9UBV4 365 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 LIMA1Q9UHB6 759 aaKnown RBP12.42□□□□□ -0.42
CDRT1-202ENST00000354433 DERAQ9Y315 318 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 C2CD2Q9Y426 696 aa12.42□□□□□ -0.42
CDRT1-202ENST00000354433 MTCL1Q9Y4B5 1905 aaKnown RBP12.42□□□□□ -0.42
CDRT1-202ENST00000354433 MYO10Q9HD67 2058 aa12.41□□□□□ -0.42
CDRT1-202ENST00000354433 ANHXE9PGG2 379 aa12.41□□□□□ -0.42
CDRT1-202ENST00000354433 GALR2O43603 387 aaPredicted RBP12.41□□□□□ -0.42
CDRT1-202ENST00000354433 CEBPBP17676 345 aa12.41□□□□□ -0.42
CDRT1-202ENST00000354433 AOC1P19801 751 aa12.41□□□□□ -0.42
CDRT1-202ENST00000354433 NUBP1P53384 320 aa12.41□□□□□ -0.42
CDRT1-202ENST00000354433 LILRA4P59901 499 aa12.41□□□□□ -0.42
CDRT1-202ENST00000354433 STK4Q13043 487 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms