RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 VDRP11473 427 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 HARS2P49590 506 aaKnown RBP15.63■□□□□ 0.09
COL17A1-201ENST00000353479 OCRLQ01968 901 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 PDCLQ13371 301 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 MUM1Q2TAK8 710 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 CCNYL1Q8N7R7 359 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 CLMNQ96JQ2 1002 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 NDFIP2Q9NV92 336 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 GTF3C4Q9UKN8 822 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 A0A0G2JND7 137 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 HOXA2O43364 376 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 PSEN2P49810 448 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 ST8SIA6P61647 398 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 ANO4Q32M45 955 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 SV2AQ7L0J3 742 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 KPNA7A9QM74 516 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 ZNF189O75820 626 aaPredicted RBP15.63■□□□□ 0.09
COL17A1-201ENST00000353479 AKAP5P24588 427 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 HABP4Q5JVS0 413 aaKnown RBP15.63■□□□□ 0.09
COL17A1-201ENST00000353479 SYDE1Q6ZW31 735 aaPredicted RBP15.63■□□□□ 0.09
COL17A1-201ENST00000353479 PPHLN1Q8NEY8 458 aaKnown RBP15.63■□□□□ 0.09
COL17A1-201ENST00000353479 COPS5Q92905 334 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 YME1L1Q96TA2 773 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 WDR18Q9BV38 432 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.63■□□□□ 0.09
COL17A1-201ENST00000353479 GTSE1Q9NYZ3 720 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.63■□□□□ 0.09
COL17A1-201ENST00000353479 PPME1Q9Y570 386 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 M0QYT0 321 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 MEIS2O14770 477 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 GHRP10912 638 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 IQSEC1Q6DN90 963 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 ELAC2Q9BQ52 826 aaKnown RBP15.63■□□□□ 0.09
COL17A1-201ENST00000353479 TRAIPQ9BWF2 469 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 CATSPERBQ9H7T0 1116 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 OLA1Q9NTK5 396 aaKnown RBP15.63■□□□□ 0.09
COL17A1-201ENST00000353479 RBM12Q9NTZ6 932 aaKnown RBP15.63■□□□□ 0.09
COL17A1-201ENST00000353479 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.63■□□□□ 0.09
COL17A1-201ENST00000353479 MAPTP10636 758 aaKnown RBP15.63■□□□□ 0.09
COL17A1-201ENST00000353479 BRAFP15056 766 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 SATB1Q01826 763 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 RBM43Q6ZSC3 357 aaKnown RBP15.63■□□□□ 0.09
COL17A1-201ENST00000353479 NLGN2Q8NFZ4 835 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 ZNF507Q8TCN5 953 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 DDIT4Q9NX09 232 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 ZFATQ9P243 1243 aa15.63■□□□□ 0.09
COL17A1-201ENST00000353479 H7C4K7 107 aa15.62■□□□□ 0.09
COL17A1-201ENST00000353479 TTC4O95801 387 aa15.62■□□□□ 0.09
COL17A1-201ENST00000353479 POMCP01189 267 aa15.62■□□□□ 0.09
COL17A1-201ENST00000353479 TMEM132BQ14DG7 1078 aa15.62■□□□□ 0.09
COL17A1-201ENST00000353479 KCNK18Q7Z418 384 aa15.62■□□□□ 0.09
COL17A1-201ENST00000353479 VSIG10LQ86VR7 867 aa15.62■□□□□ 0.09
COL17A1-201ENST00000353479 CYFIP2Q96F07 1278 aa15.62■□□□□ 0.09
COL17A1-201ENST00000353479 MTMR9Q96QG7 549 aa15.62■□□□□ 0.09
COL17A1-201ENST00000353479 DNAJC7Q99615 494 aa15.62■□□□□ 0.09
COL17A1-201ENST00000353479 BLOC1S4Q9NUP1 217 aa15.62■□□□□ 0.09
COL17A1-201ENST00000353479 AFF4Q9UHB7 1163 aaKnown RBP15.62■□□□□ 0.09
COL17A1-201ENST00000353479 FRMPD4Q14CM0 1322 aa15.62■□□□□ 0.09
COL17A1-201ENST00000353479 LGALS2P05162 132 aa15.62■□□□□ 0.09
COL17A1-201ENST00000353479 TYK2P29597 1187 aa15.62■□□□□ 0.09
COL17A1-201ENST00000353479 VSNL1P62760 191 aa15.62■□□□□ 0.09
COL17A1-201ENST00000353479 CTXN3Q4LDR2 81 aa15.62■□□□□ 0.09
COL17A1-201ENST00000353479 TINF2Q9BSI4 451 aa15.62■□□□□ 0.09
COL17A1-201ENST00000353479 TARSL2A2RTX5 802 aaKnown RBP15.62■□□□□ 0.09
COL17A1-201ENST00000353479 PCSK7Q16549 785 aa15.62■□□□□ 0.09
COL17A1-201ENST00000353479 PRAMEF19Q5SWL8 479 aa15.62■□□□□ 0.09
COL17A1-201ENST00000353479 CISHQ9NSE2 258 aa15.62■□□□□ 0.09
COL17A1-201ENST00000353479 YDJCA8MPS7 323 aa15.62■□□□□ 0.09
COL17A1-201ENST00000353479 KITP10721 976 aa15.62■□□□□ 0.09
COL17A1-201ENST00000353479 MCF2P10911 925 aa15.62■□□□□ 0.09
COL17A1-201ENST00000353479 CCDC38Q502W7 563 aa15.62■□□□□ 0.09
COL17A1-201ENST00000353479 WDR75Q8IWA0 830 aaKnown RBP15.62■□□□□ 0.09
COL17A1-201ENST00000353479 CCDC60Q8IWA6 550 aaPredicted RBP15.62■□□□□ 0.09
COL17A1-201ENST00000353479 UBE2Q2Q8WVN8 375 aa15.62■□□□□ 0.09
COL17A1-201ENST00000353479 XPO7Q9UIA9 1087 aaKnown RBP15.62■□□□□ 0.09
COL17A1-201ENST00000353479 INTUQ9ULD6 942 aa15.62■□□□□ 0.09
COL17A1-201ENST00000353479 SHROOM1Q2M3G4 852 aaPredicted RBP15.61■□□□□ 0.09
COL17A1-201ENST00000353479 ARHGAP18Q8N392 663 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 EGFL8Q99944 293 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 HMX1Q9NP08 348 aaPredicted RBP15.61■□□□□ 0.09
COL17A1-201ENST00000353479 ZNF541Q9H0D2 1346 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 CFLARO15519 480 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 KIF19Q2TAC6 998 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 SPIRE2Q8WWL2 714 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 EXOC4Q96A65 974 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 SLC12A3P55017 1021 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 INHBEP58166 350 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 ART3Q13508 389 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 PDK1Q15118 436 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 PTGISQ16647 500 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 TPCN2Q8NHX9 752 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 BHMTQ93088 406 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 KIAA1257Q9ULG3 409 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 SPAG7O75391 227 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 CDKAL1Q5VV42 579 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 CHADLQ6NUI6 762 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 TATDN1Q6P1N9 297 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 SLC47A2Q86VL8 602 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 ELMO3Q96BJ8 720 aa15.61■□□□□ 0.09
COL17A1-201ENST00000353479 KLHL29Q96CT2 875 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms