RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 DPP10Q8N608 796 aa20.18■□□□□ 0.82
HDAC4-201ENST00000345617 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.18■□□□□ 0.82
HDAC4-201ENST00000345617 SPATA18Q8TC71 538 aa20.18■□□□□ 0.82
HDAC4-201ENST00000345617 ATP8B4Q8TF62 1192 aa20.18■□□□□ 0.82
HDAC4-201ENST00000345617 PABPC3Q9H361 631 aaKnown RBP20.18■□□□□ 0.82
HDAC4-201ENST00000345617 GOLPH3Q9H4A6 298 aa20.18■□□□□ 0.82
HDAC4-201ENST00000345617 SERHL2Q9H4I8 314 aa20.18■□□□□ 0.82
HDAC4-201ENST00000345617 SERHLQ9NQF3 203 aa20.18■□□□□ 0.82
HDAC4-201ENST00000345617 SPATA16Q9BXB7 569 aa20.18■□□□□ 0.82
HDAC4-201ENST00000345617 CACNA2D2Q9NY47 1150 aa20.18■□□□□ 0.82
HDAC4-201ENST00000345617 CYP2D7A0A087X1C5 515 aa20.18■□□□□ 0.82
HDAC4-201ENST00000345617 MLNP12872 115 aa20.18■□□□□ 0.82
HDAC4-201ENST00000345617 CHRNB3Q05901 458 aa20.18■□□□□ 0.82
HDAC4-201ENST00000345617 DPY19L2Q6NUT2 758 aa20.18■□□□□ 0.82
HDAC4-201ENST00000345617 USP38Q8NB14 1042 aa20.18■□□□□ 0.82
HDAC4-201ENST00000345617 AGR3Q8TD06 166 aa20.18■□□□□ 0.82
HDAC4-201ENST00000345617 FRMPD1Q5SYB0 1578 aa20.18■□□□□ 0.82
HDAC4-201ENST00000345617 IFNA14P01570 189 aa20.18■□□□□ 0.82
HDAC4-201ENST00000345617 ZNF211Q13398 564 aaPredicted RBP20.18■□□□□ 0.82
HDAC4-201ENST00000345617 NR1I3Q14994 352 aa20.18■□□□□ 0.82
HDAC4-201ENST00000345617 SNX17Q15036 470 aa20.18■□□□□ 0.82
HDAC4-201ENST00000345617 GREM2Q9H772 168 aa20.18■□□□□ 0.82
HDAC4-201ENST00000345617 PXDNLA1KZ92 1463 aa20.18■□□□□ 0.82
HDAC4-201ENST00000345617 ERVV-1B6SEH8 477 aa20.18■□□□□ 0.82
HDAC4-201ENST00000345617 SYTL3Q4VX76 610 aa20.18■□□□□ 0.82
HDAC4-201ENST00000345617 BBOX1O75936 387 aa20.18■□□□□ 0.82
HDAC4-201ENST00000345617 PTPN21Q16825 1174 aa20.18■□□□□ 0.82
HDAC4-201ENST00000345617 TIMM50Q3ZCQ8 353 aa20.18■□□□□ 0.82
HDAC4-201ENST00000345617 MYCBPAPQ8TBZ2 947 aa20.18■□□□□ 0.82
HDAC4-201ENST00000345617 MLPHQ9BV36 600 aaPredicted RBP20.18■□□□□ 0.82
HDAC4-201ENST00000345617 FAM58BPP0C7Q3 252 aa20.18■□□□□ 0.82
HDAC4-201ENST00000345617 CAPZA2P47755 286 aa20.18■□□□□ 0.82
HDAC4-201ENST00000345617 UNC5CLQ8IV45 518 aa20.18■□□□□ 0.82
HDAC4-201ENST00000345617 RBAKQ9NYW8 714 aaPredicted RBP20.18■□□□□ 0.82
HDAC4-201ENST00000345617 STARD13Q9Y3M8 1113 aa20.18■□□□□ 0.82
HDAC4-201ENST00000345617 CAAP1Q9H8G2 361 aa20.17■□□□□ 0.82
HDAC4-201ENST00000345617 RABGEF1Q9UJ41 708 aa20.17■□□□□ 0.82
HDAC4-201ENST00000345617 USP27XA6NNY8 438 aa20.17■□□□□ 0.82
HDAC4-201ENST00000345617 PLEKHF1Q96S99 279 aa20.17■□□□□ 0.82
HDAC4-201ENST00000345617 ZBED2Q9BTP6 218 aa20.17■□□□□ 0.82
HDAC4-201ENST00000345617 ETAA1Q9NY74 926 aa20.17■□□□□ 0.82
HDAC4-201ENST00000345617 NRKQ7Z2Y5 1582 aa20.17■□□□□ 0.82
HDAC4-201ENST00000345617 NDUFS3O75489 264 aa20.17■□□□□ 0.82
HDAC4-201ENST00000345617 RALAP11233 206 aa20.17■□□□□ 0.82
HDAC4-201ENST00000345617 KLHL3Q9UH77 587 aa20.17■□□□□ 0.82
HDAC4-201ENST00000345617 ASNSP08243 561 aa20.17■□□□□ 0.82
HDAC4-201ENST00000345617 SERPINB8P50452 374 aa20.17■□□□□ 0.82
HDAC4-201ENST00000345617 PDZK1Q5T2W1 519 aa20.17■□□□□ 0.82
HDAC4-201ENST00000345617 RMND5AQ9H871 391 aa20.17■□□□□ 0.82
HDAC4-201ENST00000345617 MARCOQ9UEW3 520 aaPredicted RBP20.17■□□□□ 0.82
HDAC4-201ENST00000345617 EIF4E1BA6NMX2 242 aaKnown RBP20.17■□□□□ 0.82
HDAC4-201ENST00000345617 RAD23AP54725 363 aa20.17■□□□□ 0.82
HDAC4-201ENST00000345617 KIAA0825Q8IV33 1275 aa20.17■□□□□ 0.82
HDAC4-201ENST00000345617 SH2D3CQ8N5H7 860 aa20.17■□□□□ 0.82
HDAC4-201ENST00000345617 EMSYQ7Z589 1322 aa20.17■□□□□ 0.82
HDAC4-201ENST00000345617 PPP4R4Q6NUP7 873 aa20.17■□□□□ 0.82
HDAC4-201ENST00000345617 NLRP9Q7RTR0 991 aa20.17■□□□□ 0.82
HDAC4-201ENST00000345617 GANCQ8TET4 914 aa20.17■□□□□ 0.82
HDAC4-201ENST00000345617 POTECB2RU33 542 aa20.17■□□□□ 0.82
HDAC4-201ENST00000345617 FOXD4Q12950 439 aaPredicted RBP20.17■□□□□ 0.82
HDAC4-201ENST00000345617 TOB2Q14106 344 aaPredicted RBP20.17■□□□□ 0.82
HDAC4-201ENST00000345617 LRRC6Q86X45 466 aa20.17■□□□□ 0.82
HDAC4-201ENST00000345617 UGGT1Q9NYU2 1555 aa20.16■□□□□ 0.82
HDAC4-201ENST00000345617 CNOT3O75175 753 aaKnown RBP20.16■□□□□ 0.82
HDAC4-201ENST00000345617 BNC2Q6ZN30 1099 aaPredicted RBP20.16■□□□□ 0.82
HDAC4-201ENST00000345617 RPRD1BQ9NQG5 326 aaKnown RBP20.16■□□□□ 0.82
HDAC4-201ENST00000345617 FEM1BQ9UK73 627 aa20.16■□□□□ 0.82
HDAC4-201ENST00000345617 PPEF1O14829 653 aaPredicted RBP20.16■□□□□ 0.82
HDAC4-201ENST00000345617 SRGNP10124 158 aa20.16■□□□□ 0.82
HDAC4-201ENST00000345617 QARSP47897 775 aaKnown RBP20.16■□□□□ 0.82
HDAC4-201ENST00000345617 COX10Q12887 443 aa20.16■□□□□ 0.82
HDAC4-201ENST00000345617 AGAP9Q5VTM2 703 aa20.16■□□□□ 0.82
HDAC4-201ENST00000345617 SHCBP1Q8NEM2 672 aa20.16■□□□□ 0.82
HDAC4-201ENST00000345617 PHKG2P15735 406 aa20.16■□□□□ 0.82
HDAC4-201ENST00000345617 KIF2BQ8N4N8 673 aa20.16■□□□□ 0.82
HDAC4-201ENST00000345617 E4F1Q66K89 784 aaPredicted RBP20.16■□□□□ 0.82
HDAC4-201ENST00000345617 ENKURQ8TC29 256 aa20.16■□□□□ 0.82
HDAC4-201ENST00000345617 MYH7BA7E2Y1 1941 aa20.16■□□□□ 0.82
HDAC4-201ENST00000345617 ABCB11O95342 1321 aa20.16■□□□□ 0.82
HDAC4-201ENST00000345617 ZNF862O60290 1169 aa20.16■□□□□ 0.82
HDAC4-201ENST00000345617 BARGINQ6ZT62 677 aa20.16■□□□□ 0.82
HDAC4-201ENST00000345617 AFG1LQ8WV93 481 aa20.16■□□□□ 0.82
HDAC4-201ENST00000345617 PACSIN1Q9BY11 444 aa20.16■□□□□ 0.82
HDAC4-201ENST00000345617 SNPHO15079 494 aa20.16■□□□□ 0.82
HDAC4-201ENST00000345617 HOXB6P17509 224 aaKnown RBP20.16■□□□□ 0.82
HDAC4-201ENST00000345617 SCNN1DP51172 638 aa20.16■□□□□ 0.82
HDAC4-201ENST00000345617 OSTNP61366 133 aa20.16■□□□□ 0.82
HDAC4-201ENST00000345617 GTF2H3Q13889 308 aa20.16■□□□□ 0.82
HDAC4-201ENST00000345617 CYP4Z1Q86W10 505 aa20.16■□□□□ 0.82
HDAC4-201ENST00000345617 JAMLQ86YT9 394 aa20.16■□□□□ 0.82
HDAC4-201ENST00000345617 RBM12Q9NTZ6 932 aaKnown RBP20.16■□□□□ 0.82
HDAC4-201ENST00000345617 POTEMA6NI47 508 aa20.16■□□□□ 0.82
HDAC4-201ENST00000345617 TSC22D1Q15714 1073 aa20.16■□□□□ 0.82
HDAC4-201ENST00000345617 PPP2R3CQ969Q6 453 aa20.16■□□□□ 0.82
HDAC4-201ENST00000345617 KIAA1210Q9ULL0 1709 aa20.16■□□□□ 0.82
HDAC4-201ENST00000345617 RGS2P41220 211 aa20.15■□□□□ 0.82
HDAC4-201ENST00000345617 CTTNQ14247 550 aaKnown RBP20.15■□□□□ 0.82
HDAC4-201ENST00000345617 POTEEQ6S8J3 1075 aa20.15■□□□□ 0.82
HDAC4-201ENST00000345617 SUPT3HB4E1H0 165 aa20.15■□□□□ 0.82
HDAC4-201ENST00000345617 P4HA2O15460 535 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms