RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 FAM213AQ9BRX8 229 aa13.43□□□□□ -0.26
SGCA-202ENST00000344627 CHRDQ9H2X0 955 aa13.43□□□□□ -0.26
SGCA-202ENST00000344627 ST6GALNAC4Q9H4F1 302 aa13.43□□□□□ -0.26
SGCA-202ENST00000344627 C8orf33Q9H7E9 229 aaPredicted RBP13.43□□□□□ -0.26
SGCA-202ENST00000344627 ZNF334Q9HCZ1 680 aaPredicted RBP13.43□□□□□ -0.26
SGCA-202ENST00000344627 DPP3Q9NY33 737 aa13.43□□□□□ -0.26
SGCA-202ENST00000344627 OBP2AQ9NY56 170 aa13.43□□□□□ -0.26
SGCA-202ENST00000344627 NCDNQ9UBB6 729 aa13.43□□□□□ -0.26
SGCA-202ENST00000344627 DERAQ9Y315 318 aa13.43□□□□□ -0.26
SGCA-202ENST00000344627 A0A087X0B3 334 aa13.42□□□□□ -0.26
SGCA-202ENST00000344627 CHADO15335 359 aa13.42□□□□□ -0.26
SGCA-202ENST00000344627 LRP3O75074 770 aa13.42□□□□□ -0.26
SGCA-202ENST00000344627 FCARP24071 287 aa13.42□□□□□ -0.26
SGCA-202ENST00000344627 CDR1P51861 262 aa13.42□□□□□ -0.26
SGCA-202ENST00000344627 LMNB2Q03252 620 aa13.42□□□□□ -0.26
SGCA-202ENST00000344627 KCNA1Q09470 495 aa13.42□□□□□ -0.26
SGCA-202ENST00000344627 DUSP4Q13115 394 aa13.42□□□□□ -0.26
SGCA-202ENST00000344627 GPR17Q13304 367 aa13.42□□□□□ -0.26
SGCA-202ENST00000344627 LRRC32Q14392 662 aa13.42□□□□□ -0.26
SGCA-202ENST00000344627 FAM78AQ5JUQ0 283 aa13.42□□□□□ -0.26
SGCA-202ENST00000344627 L1TD1Q5T7N2 865 aaKnown RBP13.42□□□□□ -0.26
SGCA-202ENST00000344627 ITIH5Q86UX2 942 aa13.42□□□□□ -0.26
SGCA-202ENST00000344627 KIAA2013Q8IYS2 634 aa13.42□□□□□ -0.26
SGCA-202ENST00000344627 LINC00301Q8NCQ3 95 aa13.42□□□□□ -0.26
SGCA-202ENST00000344627 FAM3CQ92520 227 aa13.42□□□□□ -0.26
SGCA-202ENST00000344627 ASB7Q9H672 318 aa13.42□□□□□ -0.26
SGCA-202ENST00000344627 HEBP1Q9NRV9 189 aa13.42□□□□□ -0.26
SGCA-202ENST00000344627 DSEQ9UL01 958 aa13.42□□□□□ -0.26
SGCA-202ENST00000344627 RAB23Q9ULC3 237 aa13.42□□□□□ -0.26
SGCA-202ENST00000344627 SLC27A5Q9Y2P5 690 aa13.42□□□□□ -0.26
SGCA-202ENST00000344627 GOLGA8IPA6NC78 632 aa13.41□□□□□ -0.26
SGCA-202ENST00000344627 GOLGA8JA6NMD2 632 aa13.41□□□□□ -0.26
SGCA-202ENST00000344627 SOBPA7XYQ1 873 aa13.41□□□□□ -0.26
SGCA-202ENST00000344627 PIRO00625 290 aa13.41□□□□□ -0.26
SGCA-202ENST00000344627 CYB561D2O14569 222 aa13.41□□□□□ -0.26
SGCA-202ENST00000344627 PRPF6O94906 941 aaKnown RBP13.41□□□□□ -0.26
SGCA-202ENST00000344627 IL18RAPO95256 599 aa13.41□□□□□ -0.26
SGCA-202ENST00000344627 NASPP49321 788 aaPredicted RBP13.41□□□□□ -0.26
SGCA-202ENST00000344627 TUFMP49411 452 aaKnown RBP13.41□□□□□ -0.26
SGCA-202ENST00000344627 TAF6P49848 677 aa13.41□□□□□ -0.26
SGCA-202ENST00000344627 TFAMQ00059 246 aaKnown RBP13.41□□□□□ -0.26
SGCA-202ENST00000344627 PLCB2Q00722 1185 aa13.41□□□□□ -0.26
SGCA-202ENST00000344627 YAF2Q8IY57 180 aa13.41□□□□□ -0.26
SGCA-202ENST00000344627 THEM5Q8N1Q8 247 aa13.41□□□□□ -0.26
SGCA-202ENST00000344627 SYNPOQ8N3V7 929 aa13.41□□□□□ -0.26
SGCA-202ENST00000344627 CSGALNACT1Q8TDX6 532 aa13.41□□□□□ -0.26
SGCA-202ENST00000344627 C2orf15Q8WU43 125 aaKnown RBP13.41□□□□□ -0.26
SGCA-202ENST00000344627 SNX21Q969T3 373 aa13.41□□□□□ -0.26
SGCA-202ENST00000344627 DHX58Q96C10 678 aa13.41□□□□□ -0.26
SGCA-202ENST00000344627 RMDN1Q96DB5 314 aa13.41□□□□□ -0.26
SGCA-202ENST00000344627 SAAL1Q96ER3 474 aa13.41□□□□□ -0.26
SGCA-202ENST00000344627 PYM1Q9BRP8 204 aaKnown RBP13.41□□□□□ -0.26
SGCA-202ENST00000344627 PLA2G2FQ9BZM2 168 aa13.41□□□□□ -0.26
SGCA-202ENST00000344627 PCIF1Q9H4Z3 704 aa13.41□□□□□ -0.26
SGCA-202ENST00000344627 SLITRK6Q9H5Y7 841 aa13.41□□□□□ -0.26
SGCA-202ENST00000344627 GMEB2Q9UKD1 530 aa13.41□□□□□ -0.26
SGCA-202ENST00000344627 C2CD2Q9Y426 696 aa13.41□□□□□ -0.26
SGCA-202ENST00000344627 MTF2Q9Y483 593 aaPredicted RBP13.41□□□□□ -0.26
SGCA-202ENST00000344627 YIPF1Q9Y548 306 aa13.41□□□□□ -0.26
SGCA-202ENST00000344627 STYXL1Q9Y6J8 313 aa13.41□□□□□ -0.26
SGCA-202ENST00000344627 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.4□□□□□ -0.26
SGCA-202ENST00000344627 ANO9A1A5B4 782 aa13.4□□□□□ -0.26
SGCA-202ENST00000344627 PPP6R2O75170 966 aa13.4□□□□□ -0.26
SGCA-202ENST00000344627 LRRN2O75325 713 aa13.4□□□□□ -0.26
SGCA-202ENST00000344627 PPP1R37O75864 691 aa13.4□□□□□ -0.26
SGCA-202ENST00000344627 PAPSS2O95340 614 aaPredicted RBP13.4□□□□□ -0.26
SGCA-202ENST00000344627 LDHAP00338 332 aaKnown RBP13.4□□□□□ -0.26
SGCA-202ENST00000344627 GJA1P17302 382 aa13.4□□□□□ -0.26
SGCA-202ENST00000344627 ADSSP30520 456 aa13.4□□□□□ -0.26
SGCA-202ENST00000344627 GDI1P31150 447 aa13.4□□□□□ -0.26
SGCA-202ENST00000344627 CASP5P51878 434 aa13.4□□□□□ -0.26
SGCA-202ENST00000344627 AMPD3Q01432 767 aa13.4□□□□□ -0.26
SGCA-202ENST00000344627 FCHO2Q0JRZ9 810 aa13.4□□□□□ -0.26
SGCA-202ENST00000344627 FZD5Q13467 585 aa13.4□□□□□ -0.26
SGCA-202ENST00000344627 ALCAMQ13740 583 aa13.4□□□□□ -0.26
SGCA-202ENST00000344627 ARHGAP29Q52LW3 1261 aa13.4□□□□□ -0.26
SGCA-202ENST00000344627 ARHGAP15Q53QZ3 475 aa13.4□□□□□ -0.26
SGCA-202ENST00000344627 DGKKQ5KSL6 1271 aa13.4□□□□□ -0.26
SGCA-202ENST00000344627 CRELD2Q6UXH1 353 aaPredicted RBP13.4□□□□□ -0.26
SGCA-202ENST00000344627 VITQ6UXI7 678 aa13.4□□□□□ -0.26
SGCA-202ENST00000344627 STXBP4Q6ZWJ1 553 aa13.4□□□□□ -0.26
SGCA-202ENST00000344627 NT5DC4Q86YG4 428 aa13.4□□□□□ -0.26
SGCA-202ENST00000344627 ZNF687Q8N1G0 1237 aa13.4□□□□□ -0.26
SGCA-202ENST00000344627 ATAD1Q8NBU5 361 aa13.4□□□□□ -0.26
SGCA-202ENST00000344627 ZSCAN18Q8TBC5 510 aaPredicted RBP13.4□□□□□ -0.26
SGCA-202ENST00000344627 FAM200AQ8TCP9 573 aa13.4□□□□□ -0.26
SGCA-202ENST00000344627 CACTINQ8WUQ7 758 aaKnown RBP13.4□□□□□ -0.26
SGCA-202ENST00000344627 TMEM209Q96SK2 561 aa13.4□□□□□ -0.26
SGCA-202ENST00000344627 LRRC27Q9C0I9 530 aa13.4□□□□□ -0.26
SGCA-202ENST00000344627 CEP72Q9P209 647 aa13.4□□□□□ -0.26
SGCA-202ENST00000344627 SMG5Q9UPR3 1016 aaKnown RBP13.4□□□□□ -0.26
SGCA-202ENST00000344627 R3HCC1Q9Y3T6 440 aaKnown RBP13.4□□□□□ -0.26
SGCA-202ENST00000344627 MORC2Q9Y6X9 1032 aaPredicted RBP13.4□□□□□ -0.26
SGCA-202ENST00000344627 MIA3Q5JRA6 1907 aa13.4□□□□□ -0.26
SGCA-202ENST00000344627 GVINP1Q7Z2Y8 2422 aa13.4□□□□□ -0.26
SGCA-202ENST00000344627 CUTAO60888 179 aa13.39□□□□□ -0.27
SGCA-202ENST00000344627 SOAT2O75908 522 aa13.39□□□□□ -0.27
SGCA-202ENST00000344627 YEATS4O95619 227 aa13.39□□□□□ -0.27
SGCA-202ENST00000344627 CYP11A1P05108 521 aa13.39□□□□□ -0.27
SGCA-202ENST00000344627 KRT19P08727 400 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms