RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 MTERF3Q96E29 417 aa12.8□□□□□ -0.36
TRIOBP-202ENST00000344404 MS4A14Q96JA4 679 aa12.8□□□□□ -0.36
TRIOBP-202ENST00000344404 PCDHB12Q9Y5F1 795 aa12.8□□□□□ -0.36
TRIOBP-202ENST00000344404 NME5P56597 212 aa12.79□□□□□ -0.36
TRIOBP-202ENST00000344404 MIIPQ5JXC2 388 aa12.79□□□□□ -0.36
TRIOBP-202ENST00000344404 IZUMO3Q5VZ72 239 aa12.79□□□□□ -0.36
TRIOBP-202ENST00000344404 CCDC137Q6PK04 289 aaKnown RBP12.79□□□□□ -0.36
TRIOBP-202ENST00000344404 STMN3Q9NZ72 180 aa12.79□□□□□ -0.36
TRIOBP-202ENST00000344404 CRLS1Q9UJA2 301 aa12.79□□□□□ -0.36
TRIOBP-202ENST00000344404 CEP152O94986 1710 aa12.79□□□□□ -0.36
TRIOBP-202ENST00000344404 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.79□□□□□ -0.36
TRIOBP-202ENST00000344404 COPS7BQ9H9Q2 264 aaPredicted RBP12.79□□□□□ -0.36
TRIOBP-202ENST00000344404 PODXLO00592 558 aa12.79□□□□□ -0.36
TRIOBP-202ENST00000344404 CKMP06732 381 aa12.79□□□□□ -0.36
TRIOBP-202ENST00000344404 S100A5P33763 92 aa12.79□□□□□ -0.36
TRIOBP-202ENST00000344404 DDX47Q9H0S4 455 aaKnown RBP12.79□□□□□ -0.36
TRIOBP-202ENST00000344404 KRT84Q9NSB2 600 aa12.79□□□□□ -0.36
TRIOBP-202ENST00000344404 TRIM10Q9UDY6 481 aa12.79□□□□□ -0.36
TRIOBP-202ENST00000344404 PTPRTO14522 1441 aa12.79□□□□□ -0.36
TRIOBP-202ENST00000344404 A0A087WUV0 522 aaPredicted RBP12.79□□□□□ -0.36
TRIOBP-202ENST00000344404 RNF103O00237 685 aa12.79□□□□□ -0.36
TRIOBP-202ENST00000344404 CSNK2BP67870 215 aa12.79□□□□□ -0.36
TRIOBP-202ENST00000344404 TMEM154Q6P9G4 183 aa12.79□□□□□ -0.36
TRIOBP-202ENST00000344404 XPO7Q9UIA9 1087 aaKnown RBP12.79□□□□□ -0.36
TRIOBP-202ENST00000344404 F8W810 466 aa12.79□□□□□ -0.36
TRIOBP-202ENST00000344404 CCDC92Q53HC0 331 aaPredicted RBP12.79□□□□□ -0.36
TRIOBP-202ENST00000344404 GALNT4Q8N4A0 578 aa12.79□□□□□ -0.36
TRIOBP-202ENST00000344404 BLOC1S5Q8TDH9 187 aa12.79□□□□□ -0.36
TRIOBP-202ENST00000344404 RAB6BQ9NRW1 208 aa12.79□□□□□ -0.36
TRIOBP-202ENST00000344404 GSTM1P09488 218 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 GRK2P25098 689 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 YWHAQP27348 245 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 GTF2E2P29084 291 aaKnown RBP12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 NR1H3Q13133 447 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 VPS50Q96JG6 964 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 MYO1CO00159 1063 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 SCAMP3O14828 347 aaKnown RBP12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 GPC1P35052 558 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 SARM1Q6SZW1 724 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 CSGALNACT1Q8TDX6 532 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 FAM84BQ96KN1 310 aaPredicted RBP12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 NDEL1Q9GZM8 345 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 SENP2Q9HC62 589 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 ADARB2Q9NS39 739 aaKnown RBP12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 PCMTD2Q9NV79 361 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 PRR36Q9H6K5 1346 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 ASAP2O43150 1006 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 HAUS5O94927 633 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 NUDT14O95848 222 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 PFKFB3Q16875 520 aaPredicted RBP12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 POMGNT2Q8NAT1 580 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 LEMD2Q8NC56 503 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 CCDC3Q9BQI4 270 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 SOX13Q9UN79 622 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 PMPCBO75439 489 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 PARNO95453 639 aaKnown RBP12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 PTPN7P35236 360 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 ARFIP2P53365 341 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 TADA1Q96BN2 335 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 STRBPQ96SI9 672 aaKnown RBP12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.78□□□□□ -0.363e-6■■■□□ 15.8
TRIOBP-202ENST00000344404 CEP72Q9P209 647 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 DYRK3O43781 588 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 H2AFYO75367 372 aaKnown RBP12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 B3GAT3O94766 335 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 PDGFRAP16234 1089 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 PSMA3P25788 255 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 PGS1Q32NB8 556 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 NBPF9Q3BBW0 867 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 AKIRIN2Q53H80 203 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 STRIP1Q5VSL9 837 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 ICE2Q659A1 982 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 ARRDC4Q8NCT1 418 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 MOV10L1Q9BXT6 1211 aaKnown RBP12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 TEX13BQ9BXU2 312 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 PIF1Q9H611 641 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 TDRKHQ9Y2W6 561 aaKnown RBP12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 ZBTB39O15060 712 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 ATMINO43313 823 aaPredicted RBP12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 TSPAN3O60637 253 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 SCP2P22307 547 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 TCF7P36402 384 aaPredicted RBP12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 COL23A1Q86Y22 540 aaPredicted RBP12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 DTX3LQ8TDB6 740 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 RABGGTAQ92696 567 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 C18orf8Q96DM3 657 aa12.78□□□□□ -0.36
TRIOBP-202ENST00000344404 RHOBTB1O94844 696 aa12.77□□□□□ -0.36
TRIOBP-202ENST00000344404 KRT20P35900 424 aa12.77□□□□□ -0.36
TRIOBP-202ENST00000344404 NCKAP1LP55160 1127 aa12.77□□□□□ -0.36
TRIOBP-202ENST00000344404 ERBB4Q15303 1308 aa12.77□□□□□ -0.36
TRIOBP-202ENST00000344404 NFIBO00712 420 aa12.77□□□□□ -0.36
TRIOBP-202ENST00000344404 ITGB6P18564 788 aa12.77□□□□□ -0.36
TRIOBP-202ENST00000344404 GALNTL6Q49A17 601 aa12.77□□□□□ -0.36
TRIOBP-202ENST00000344404 MED8Q96G25 268 aa12.77□□□□□ -0.36
TRIOBP-202ENST00000344404 TMEM117Q9H0C3 514 aa12.77□□□□□ -0.36
TRIOBP-202ENST00000344404 ZNF304Q9HCX3 659 aa12.77□□□□□ -0.36
TRIOBP-202ENST00000344404 GALNT8Q9NY28 637 aa12.77□□□□□ -0.36
TRIOBP-202ENST00000344404 FHOD1Q9Y613 1164 aa12.77□□□□□ -0.36
TRIOBP-202ENST00000344404 CRB1P82279 1406 aa12.77□□□□□ -0.36
TRIOBP-202ENST00000344404 EPC2Q52LR7 807 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms