RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 SERPINA10Q9UK55 444 aa15.66■□□□□ 0.1
CLCN1-201ENST00000343257 ARHGEF35A5YM69 484 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 C6orf229H3BNL8 230 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 CIB2O75838 187 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 MTA2O94776 668 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 SORBS2O94875 1100 aaKnown RBP15.65■□□□□ 0.1
CLCN1-201ENST00000343257 CFBP00751 764 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 CFHP08603 1231 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 FAM200BP0CF97 657 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 GRIA2P42262 883 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 GPATCH4Q5T3I0 446 aaKnown RBP15.65■□□□□ 0.1
CLCN1-201ENST00000343257 LMBRD2Q68DH5 695 aaPredicted RBP15.65■□□□□ 0.1
CLCN1-201ENST00000343257 SYDE1Q6ZW31 735 aaPredicted RBP15.65■□□□□ 0.1
CLCN1-201ENST00000343257 SPATA24Q86W54 205 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 SCUBE1Q8IWY4 988 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 CCDC110Q8TBZ0 833 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 POMGNT1Q8WZA1 660 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 OXNAD1Q96HP4 312 aaPredicted RBP15.65■□□□□ 0.1
CLCN1-201ENST00000343257 PHF12Q96QT6 1004 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 CD209Q9NNX6 404 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 F5H6K3 240 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 SGK1O00141 431 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 ADRB2P07550 413 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 CYP3A4P08684 503 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 KLRC2P26717 231 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 MFAP3P55082 362 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 GPX6P59796 221 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 TCP10Q12799 353 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 SLFN13Q68D06 897 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 RGS9BPQ6ZS82 235 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 STXBP4Q6ZWJ1 553 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 GSTCDQ8NEC7 633 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 CCDC124Q96CT7 223 aaKnown RBP15.65■□□□□ 0.1
CLCN1-201ENST00000343257 HSPBP1Q9NZL4 362 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 SERPINB13Q9UIV8 391 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 COL22A1Q8NFW1 1626 aaPredicted RBP15.65■□□□□ 0.1
CLCN1-201ENST00000343257 DNALI1O14645 258 aaPredicted RBP15.65■□□□□ 0.1
CLCN1-201ENST00000343257 RARBP10826 455 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 CDK7P50613 346 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 DDB1Q16531 1140 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 BBS9Q3SYG4 887 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 C3orf62Q6ZUJ4 267 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 MARK2Q7KZI7 788 aaKnown RBP15.65■□□□□ 0.1
CLCN1-201ENST00000343257 ST13P4Q8IZP2 240 aaPredicted RBP15.65■□□□□ 0.1
CLCN1-201ENST00000343257 BBOF1Q8ND07 529 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 TAS1R2Q8TE23 839 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 PAFAH2Q99487 392 aa15.65■□□□□ 0.1
CLCN1-201ENST00000343257 LPXNO60711 386 aa15.64■□□□□ 0.09
CLCN1-201ENST00000343257 ADSSP30520 456 aa15.64■□□□□ 0.09
CLCN1-201ENST00000343257 HIRAP54198 1017 aaPredicted RBP15.64■□□□□ 0.09
CLCN1-201ENST00000343257 EPHB1P54762 984 aa15.64■□□□□ 0.09
CLCN1-201ENST00000343257 CCNG2Q16589 344 aa15.64■□□□□ 0.09
CLCN1-201ENST00000343257 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.64■□□□□ 0.09
CLCN1-201ENST00000343257 RHPN2Q8IUC4 686 aa15.64■□□□□ 0.09
CLCN1-201ENST00000343257 PYROXD1Q8WU10 500 aa15.64■□□□□ 0.09
CLCN1-201ENST00000343257 AZIN2Q96A70 460 aa15.64■□□□□ 0.09
CLCN1-201ENST00000343257 TTC25Q96NG3 672 aa15.64■□□□□ 0.09
CLCN1-201ENST00000343257 HSD17B14Q9BPX1 270 aa15.64■□□□□ 0.09
CLCN1-201ENST00000343257 WDR18Q9BV38 432 aa15.64■□□□□ 0.09
CLCN1-201ENST00000343257 LARSQ9P2J5 1176 aaKnown RBP15.64■□□□□ 0.09
CLCN1-201ENST00000343257 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.64■□□□□ 0.09
CLCN1-201ENST00000343257 RIMBP2O15034 1052 aa15.64■□□□□ 0.09
CLCN1-201ENST00000343257 TPP2P29144 1249 aaPredicted RBP15.64■□□□□ 0.09
CLCN1-201ENST00000343257 MSS51Q4VC12 460 aa15.64■□□□□ 0.09
CLCN1-201ENST00000343257 SKA1Q96BD8 255 aa15.64■□□□□ 0.09
CLCN1-201ENST00000343257 FAM20AQ96MK3 541 aa15.64■□□□□ 0.09
CLCN1-201ENST00000343257 POLR3CQ9BUI4 534 aaPredicted RBP15.64■□□□□ 0.09
CLCN1-201ENST00000343257 ARHGEF4Q9NR80 690 aa15.64■□□□□ 0.09
CLCN1-201ENST00000343257 RPL26L1Q9UNX3 145 aaKnown RBP15.64■□□□□ 0.09
CLCN1-201ENST00000343257 DDX60LQ5H9U9 1706 aaKnown RBP15.64■□□□□ 0.09
CLCN1-201ENST00000343257 KIF13BQ9NQT8 1826 aa15.64■□□□□ 0.09
CLCN1-201ENST00000343257 DCAF8L1A6NGE4 600 aa15.63■□□□□ 0.09
CLCN1-201ENST00000343257 PLSCR1O15162 318 aa15.63■□□□□ 0.09
CLCN1-201ENST00000343257 GAS7O60861 476 aa15.63■□□□□ 0.09
CLCN1-201ENST00000343257 GEMIN4P57678 1058 aaKnown RBP15.63■□□□□ 0.09
CLCN1-201ENST00000343257 GTF2IP78347 998 aa15.63■□□□□ 0.09
CLCN1-201ENST00000343257 SFT2D3Q587I9 215 aa15.63■□□□□ 0.09
CLCN1-201ENST00000343257 C6orf163Q5TEZ5 329 aa15.63■□□□□ 0.09
CLCN1-201ENST00000343257 ANKRD22Q5VYY1 191 aa15.63■□□□□ 0.09
CLCN1-201ENST00000343257 LINC00116Q8NCU8 138 aa15.63■□□□□ 0.09
CLCN1-201ENST00000343257 NAT14Q8WUY8 206 aa15.63■□□□□ 0.09
CLCN1-201ENST00000343257 KAT6AQ92794 2004 aa15.63■□□□□ 0.09
CLCN1-201ENST00000343257 MTBPQ96DY7 904 aa15.63■□□□□ 0.09
CLCN1-201ENST00000343257 RILPQ96NA2 401 aa15.63■□□□□ 0.09
CLCN1-201ENST00000343257 KIFC3Q9BVG8 833 aa15.63■□□□□ 0.09
CLCN1-201ENST00000343257 MMADHCQ9H3L0 296 aaPredicted RBP15.63■□□□□ 0.09
CLCN1-201ENST00000343257 PHF24Q9UPV7 400 aa15.63■□□□□ 0.09
CLCN1-201ENST00000343257 DAGLAQ9Y4D2 1042 aa15.63■□□□□ 0.09
CLCN1-201ENST00000343257 MT-ND3P03897 115 aa15.63■□□□□ 0.09
CLCN1-201ENST00000343257 VAV1P15498 845 aa15.63■□□□□ 0.09
CLCN1-201ENST00000343257 ADRA2BP18089 450 aa15.63■□□□□ 0.09
CLCN1-201ENST00000343257 NRLP54845 237 aa15.63■□□□□ 0.09
CLCN1-201ENST00000343257 BPIFB4P59827 614 aa15.63■□□□□ 0.09
CLCN1-201ENST00000343257 IRX4P78413 519 aa15.63■□□□□ 0.09
CLCN1-201ENST00000343257 Q4G0T1 1027 aa15.63■□□□□ 0.09
CLCN1-201ENST00000343257 CENPUQ71F23 418 aa15.63■□□□□ 0.09
CLCN1-201ENST00000343257 ARID3BQ8IVW6 561 aaPredicted RBP15.63■□□□□ 0.09
CLCN1-201ENST00000343257 ULK2Q8IYT8 1036 aa15.63■□□□□ 0.09
CLCN1-201ENST00000343257 MCOLN2Q8IZK6 566 aa15.63■□□□□ 0.09
CLCN1-201ENST00000343257 MBOAT7Q96N66 472 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms