RNA–Protein interactions for RNA: ENST00000342905.10

NLRC4-201, Transcript of NLR family CARD domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene NLRC4, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-201ENST00000342905 AIPL1Q9NZN9 384 aa9.32□□□□□ -0.92
NLRC4-201ENST00000342905 CNTN3Q9P232 1028 aa9.32□□□□□ -0.92
NLRC4-201ENST00000342905 ARHGAP20Q9P2F6 1191 aa9.32□□□□□ -0.92
NLRC4-201ENST00000342905 SIX4Q9UIU6 781 aa9.32□□□□□ -0.92
NLRC4-201ENST00000342905 INPP5FQ9Y2H2 1132 aa9.32□□□□□ -0.92
NLRC4-201ENST00000342905 GIT1Q9Y2X7 761 aa9.32□□□□□ -0.92
NLRC4-201ENST00000342905 DERAQ9Y315 318 aa9.32□□□□□ -0.92
NLRC4-201ENST00000342905 C2CD2Q9Y426 696 aa9.32□□□□□ -0.92
NLRC4-201ENST00000342905 NUB1Q9Y5A7 615 aa9.32□□□□□ -0.92
NLRC4-201ENST00000342905 XIRP2A4UGR9 3374 aa9.32□□□□□ -0.92
NLRC4-201ENST00000342905 PLXNA4Q9HCM2 1894 aa9.31□□□□□ -0.92
NLRC4-201ENST00000342905 ARL5CA6NH57 179 aa9.31□□□□□ -0.92
NLRC4-201ENST00000342905 FOXN3O00409 490 aaPredicted RBP9.31□□□□□ -0.92
NLRC4-201ENST00000342905 FGF18O76093 207 aa9.31□□□□□ -0.92
NLRC4-201ENST00000342905 ASS1P00966 412 aaKnown RBP9.31□□□□□ -0.92
NLRC4-201ENST00000342905 ITGB3P05106 788 aa9.31□□□□□ -0.92
NLRC4-201ENST00000342905 SERPING1P05155 500 aa9.31□□□□□ -0.92
NLRC4-201ENST00000342905 ITGB1P05556 798 aa9.31□□□□□ -0.92
NLRC4-201ENST00000342905 KRT19P08727 400 aa9.31□□□□□ -0.92
NLRC4-201ENST00000342905 KCNE1P15382 129 aa9.31□□□□□ -0.92
NLRC4-201ENST00000342905 FERP16591 822 aa9.31□□□□□ -0.92
NLRC4-201ENST00000342905 EIF4A3P38919 411 aaKnown RBP9.31□□□□□ -0.92
NLRC4-201ENST00000342905 ALDH7A1P49419 539 aaKnown RBP9.31□□□□□ -0.92
NLRC4-201ENST00000342905 MFAP3P55082 362 aa9.31□□□□□ -0.92
NLRC4-201ENST00000342905 PLCB3Q01970 1234 aa9.31□□□□□ -0.92
NLRC4-201ENST00000342905 GCNT1Q02742 428 aa9.31□□□□□ -0.92
NLRC4-201ENST00000342905 ARID5AQ03989 594 aa9.31□□□□□ -0.92
NLRC4-201ENST00000342905 TRPC3Q13507 836 aa9.31□□□□□ -0.92
NLRC4-201ENST00000342905 CCDC85BQ15834 202 aaPredicted RBP9.31□□□□□ -0.92
NLRC4-201ENST00000342905 ZBTB6Q15916 424 aa9.31□□□□□ -0.92
NLRC4-201ENST00000342905 ZNF699Q32M78 642 aa9.31□□□□□ -0.92
NLRC4-201ENST00000342905 TDRD12Q587J7 1177 aaKnown RBP9.31□□□□□ -0.92
NLRC4-201ENST00000342905 KCNT2Q6UVM3 1135 aa9.31□□□□□ -0.92
NLRC4-201ENST00000342905 IRF2BP2Q7Z5L9 587 aa9.31□□□□□ -0.92
NLRC4-201ENST00000342905 PPM1EQ8WY54 764 aa9.31□□□□□ -0.92
NLRC4-201ENST00000342905 SHC3Q92529 594 aa9.31□□□□□ -0.92
NLRC4-201ENST00000342905 PPP2R3CQ969Q6 453 aa9.31□□□□□ -0.92
NLRC4-201ENST00000342905 C18orf25Q96B23 403 aaPredicted RBP9.31□□□□□ -0.92
NLRC4-201ENST00000342905 ARID3AQ99856 593 aa9.31□□□□□ -0.92
NLRC4-201ENST00000342905 DESI2Q9BSY9 194 aa9.31□□□□□ -0.92
NLRC4-201ENST00000342905 NSUN3Q9H649 340 aaKnown RBP9.31□□□□□ -0.92
NLRC4-201ENST00000342905 NHEJ1Q9H9Q4 299 aaPredicted RBP9.31□□□□□ -0.92
NLRC4-201ENST00000342905 DPP3Q9NY33 737 aa9.31□□□□□ -0.92
NLRC4-201ENST00000342905 SPG21Q9NZD8 308 aa9.31□□□□□ -0.92
NLRC4-201ENST00000342905 HCSTQ9UBK5 93 aa9.31□□□□□ -0.92
NLRC4-201ENST00000342905 TUBGCP4Q9UGJ1 667 aa9.31□□□□□ -0.92
NLRC4-201ENST00000342905 LZTS1Q9Y250 596 aa9.31□□□□□ -0.92
NLRC4-201ENST00000342905 SMIM28A0A1B0GU29 152 aa9.3□□□□□ -0.92
NLRC4-201ENST00000342905 USP27XA6NNY8 438 aa9.3□□□□□ -0.92
NLRC4-201ENST00000342905 PTGESO14684 152 aa9.3□□□□□ -0.92
NLRC4-201ENST00000342905 CLSTN1O94985 981 aa9.3□□□□□ -0.92
NLRC4-201ENST00000342905 NDUFA10O95299 355 aa9.3□□□□□ -0.92
NLRC4-201ENST00000342905 POLR2BP30876 1174 aaKnown RBP9.3□□□□□ -0.92
NLRC4-201ENST00000342905 MLH1P40692 756 aa9.3□□□□□ -0.92
NLRC4-201ENST00000342905 PRKCIP41743 596 aa9.3□□□□□ -0.92
NLRC4-201ENST00000342905 BCAR1P56945 870 aa9.3□□□□□ -0.92
NLRC4-201ENST00000342905 KRT17Q04695 432 aa9.3□□□□□ -0.92
NLRC4-201ENST00000342905 KLHL30Q0D2K2 578 aa9.3□□□□□ -0.92
NLRC4-201ENST00000342905 CUL2Q13617 745 aa9.3□□□□□ -0.92
NLRC4-201ENST00000342905 SKIV2LQ15477 1246 aaKnown RBP9.3□□□□□ -0.92
NLRC4-201ENST00000342905 SGSM1Q2NKQ1 1148 aa9.3□□□□□ -0.92
NLRC4-201ENST00000342905 PDE12Q6L8Q7 609 aaKnown RBP9.3□□□□□ -0.92
NLRC4-201ENST00000342905 ENOSF1Q7L5Y1 443 aa9.3□□□□□ -0.92
NLRC4-201ENST00000342905 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.3□□□□□ -0.92
NLRC4-201ENST00000342905 SLC39A11Q8N1S5 342 aa9.3□□□□□ -0.92
NLRC4-201ENST00000342905 ACRBPQ8NEB7 543 aa9.3□□□□□ -0.92
NLRC4-201ENST00000342905 SPPL3Q8TCT6 385 aa9.3□□□□□ -0.92
NLRC4-201ENST00000342905 POF1BQ8WVV4 589 aa9.3□□□□□ -0.92
NLRC4-201ENST00000342905 FAM81BQ96LP2 452 aa9.3□□□□□ -0.92
NLRC4-201ENST00000342905 ZFP42Q96MM3 310 aa9.3□□□□□ -0.92
NLRC4-201ENST00000342905 FAM193BQ96PV7 902 aaPredicted RBP9.3□□□□□ -0.92
NLRC4-201ENST00000342905 TSPAN18Q96SJ8 248 aa9.3□□□□□ -0.92
NLRC4-201ENST00000342905 GAD1Q99259 594 aa9.3□□□□□ -0.92
NLRC4-201ENST00000342905 TMEM175Q9BSA9 504 aa9.3□□□□□ -0.92
NLRC4-201ENST00000342905 IMPG2Q9BZV3 1241 aa9.3□□□□□ -0.92
NLRC4-201ENST00000342905 XYLT2Q9H1B5 865 aa9.3□□□□□ -0.92
NLRC4-201ENST00000342905 ALG13Q9NP73 1137 aaKnown RBP9.3□□□□□ -0.92
NLRC4-201ENST00000342905 THEGQ9P2T0 379 aa9.3□□□□□ -0.92
NLRC4-201ENST00000342905 STK39Q9UEW8 545 aa9.3□□□□□ -0.92
NLRC4-201ENST00000342905 PUF60Q9UHX1 559 aaKnown RBP9.3□□□□□ -0.92
NLRC4-201ENST00000342905 ITGA11Q9UKX5 1188 aa9.3□□□□□ -0.92
NLRC4-201ENST00000342905 UBQLN1Q9UMX0 589 aaKnown RBP9.3□□□□□ -0.92
NLRC4-201ENST00000342905 POLIQ9UNA4 740 aa9.3□□□□□ -0.92
NLRC4-201ENST00000342905 AGAP1Q9UPQ3 857 aa9.3□□□□□ -0.92
NLRC4-201ENST00000342905 SPTBN5Q9NRC6 3674 aaKnown RBP9.29□□□□□ -0.92
NLRC4-201ENST00000342905 ATG2AQ2TAZ0 1938 aa9.29□□□□□ -0.92
NLRC4-201ENST00000342905 SSU72P8A0A1W2PR75 194 aa9.29□□□□□ -0.92
NLRC4-201ENST00000342905 PPEF2O14830 753 aa9.29□□□□□ -0.92
NLRC4-201ENST00000342905 XPOTO43592 962 aaKnown RBP9.29□□□□□ -0.92
NLRC4-201ENST00000342905 NCK2O43639 380 aa9.29□□□□□ -0.92
NLRC4-201ENST00000342905 POMCP01189 267 aa9.29□□□□□ -0.92
NLRC4-201ENST00000342905 ACO1P21399 889 aaKnown RBP9.29□□□□□ -0.92
NLRC4-201ENST00000342905 TBXAS1P24557 533 aaPredicted RBP9.29□□□□□ -0.92
NLRC4-201ENST00000342905 CYLC1P35663 651 aaPredicted RBP9.29□□□□□ -0.92
NLRC4-201ENST00000342905 PBX3P40426 434 aa9.29□□□□□ -0.92
NLRC4-201ENST00000342905 USP8P40818 1118 aa9.29□□□□□ -0.92
NLRC4-201ENST00000342905 AFF1P51825 1210 aaKnown RBP9.29□□□□□ -0.92
NLRC4-201ENST00000342905 KIF11P52732 1056 aa9.29□□□□□ -0.92
NLRC4-201ENST00000342905 RBP5P82980 135 aa9.29□□□□□ -0.92
NLRC4-201ENST00000342905 PTK2Q05397 1052 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms