RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 TASP1Q9H6P5 420 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 SSU72P8A0A1W2PR75 194 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 AP1G2O75843 785 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 ALDH1A2O94788 518 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 KRT4P19013 534 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 CUL3Q13618 768 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 TRABDQ9H4I3 376 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 YY1AP1Q9H869 796 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 NSMCE4AQ9NXX6 385 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 POLLQ9UGP5 575 aa15.69■□□□□ 0.1
UBE3B-202ENST00000342494 PHF2O75151 1096 aa15.68■□□□□ 0.1
UBE3B-202ENST00000342494 CYP2C8P10632 490 aa15.68■□□□□ 0.1
UBE3B-202ENST00000342494 KLRK1P26718 216 aa15.68■□□□□ 0.1
UBE3B-202ENST00000342494 ZNF677Q86XU0 584 aa15.68■□□□□ 0.1
UBE3B-202ENST00000342494 RNF168Q8IYW5 571 aaPredicted RBP15.68■□□□□ 0.1
UBE3B-202ENST00000342494 KIRREL3Q8IZU9 778 aa15.68■□□□□ 0.1
UBE3B-202ENST00000342494 FBXO32Q969P5 355 aa15.68■□□□□ 0.1
UBE3B-202ENST00000342494 DDIT4Q9NX09 232 aa15.68■□□□□ 0.1
UBE3B-202ENST00000342494 IQGAP3Q86VI3 1631 aa15.68■□□□□ 0.1
UBE3B-202ENST00000342494 RNF17Q9BXT8 1623 aaKnown RBP15.68■□□□□ 0.1
UBE3B-202ENST00000342494 PNPLA6Q8IY17 1366 aa15.68■□□□□ 0.1
UBE3B-202ENST00000342494 MSH4O15457 936 aa15.68■□□□□ 0.1
UBE3B-202ENST00000342494 SLC9A1P19634 815 aa15.68■□□□□ 0.1
UBE3B-202ENST00000342494 SERPINB9P50453 376 aa15.68■□□□□ 0.1
UBE3B-202ENST00000342494 BYSLQ13895 437 aaKnown RBP15.68■□□□□ 0.1
UBE3B-202ENST00000342494 SPATA4Q8NEY3 305 aa15.68■□□□□ 0.1
UBE3B-202ENST00000342494 STN1Q9H668 368 aaKnown RBP15.68■□□□□ 0.1
UBE3B-202ENST00000342494 GIMAP4Q9NUV9 329 aa15.68■□□□□ 0.1
UBE3B-202ENST00000342494 HEATR9A2RTY3 570 aa15.68■□□□□ 0.1
UBE3B-202ENST00000342494 IL10P22301 178 aa15.68■□□□□ 0.1
UBE3B-202ENST00000342494 SMTNL2Q2TAL5 461 aa15.68■□□□□ 0.1
UBE3B-202ENST00000342494 WDR48Q8TAF3 677 aa15.68■□□□□ 0.1
UBE3B-202ENST00000342494 WDCPQ9H6R7 721 aa15.68■□□□□ 0.1
UBE3B-202ENST00000342494 TMEM161AQ9NX61 479 aa15.68■□□□□ 0.1
UBE3B-202ENST00000342494 FAM32AQ9Y421 112 aaKnown RBP15.68■□□□□ 0.1
UBE3B-202ENST00000342494 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.68■□□□□ 0.1
UBE3B-202ENST00000342494 GMNCA6NCL1 334 aa15.68■□□□□ 0.1
UBE3B-202ENST00000342494 PFDN1O60925 122 aa15.68■□□□□ 0.1
UBE3B-202ENST00000342494 RPLP2P05387 115 aaKnown RBP15.68■□□□□ 0.1
UBE3B-202ENST00000342494 BLVRAP53004 296 aa15.68■□□□□ 0.1
UBE3B-202ENST00000342494 MIB1Q86YT6 1006 aa15.68■□□□□ 0.1
UBE3B-202ENST00000342494 CD302Q8IX05 232 aa15.68■□□□□ 0.1
UBE3B-202ENST00000342494 PKD2L2Q9NZM6 624 aa15.68■□□□□ 0.1
UBE3B-202ENST00000342494 C6orf203Q9P0P8 240 aaPredicted RBP15.68■□□□□ 0.1
UBE3B-202ENST00000342494 OGTO15294 1046 aa15.67■□□□□ 0.1
UBE3B-202ENST00000342494 STX7O15400 261 aaKnown RBP15.67■□□□□ 0.1
UBE3B-202ENST00000342494 ASS1P00966 412 aaKnown RBP15.67■□□□□ 0.1
UBE3B-202ENST00000342494 POLBP06746 335 aa15.67■□□□□ 0.1
UBE3B-202ENST00000342494 CCDC144BQ3MJ40 725 aa15.67■□□□□ 0.1
UBE3B-202ENST00000342494 ERCC6L2Q5T890 1561 aa15.67■□□□□ 0.1
UBE3B-202ENST00000342494 OPTNQ96CV9 577 aa15.67■□□□□ 0.1
UBE3B-202ENST00000342494 ZDHHC15Q96MV8 337 aa15.67■□□□□ 0.1
UBE3B-202ENST00000342494 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.67■□□□□ 0.1
UBE3B-202ENST00000342494 F5H5T6 163 aa15.67■□□□□ 0.1
UBE3B-202ENST00000342494 MUTP22033 750 aa15.67■□□□□ 0.1
UBE3B-202ENST00000342494 SPRP35270 261 aaPredicted RBP15.67■□□□□ 0.1
UBE3B-202ENST00000342494 CTXN3Q4LDR2 81 aa15.67■□□□□ 0.1
UBE3B-202ENST00000342494 NAPEPLDQ6IQ20 393 aa15.67■□□□□ 0.1
UBE3B-202ENST00000342494 ADAM33Q9BZ11 813 aa15.67■□□□□ 0.1
UBE3B-202ENST00000342494 OSBPL8Q9BZF1 889 aa15.67■□□□□ 0.1
UBE3B-202ENST00000342494 NEU2Q9Y3R4 380 aa15.67■□□□□ 0.1
UBE3B-202ENST00000342494 IPPQ9Y573 584 aa15.67■□□□□ 0.1
UBE3B-202ENST00000342494 CST8O60676 142 aa15.67■□□□□ 0.1
UBE3B-202ENST00000342494 RNASEH1O60930 286 aaKnown RBP15.67■□□□□ 0.1
UBE3B-202ENST00000342494 DDHD2O94830 711 aa15.67■□□□□ 0.1
UBE3B-202ENST00000342494 MMP14P50281 582 aa15.67■□□□□ 0.1
UBE3B-202ENST00000342494 ANTXR2P58335 489 aa15.67■□□□□ 0.1
UBE3B-202ENST00000342494 PPP2R3BQ9Y5P8 575 aa15.67■□□□□ 0.1
UBE3B-202ENST00000342494 M0QYT0 321 aa15.67■□□□□ 0.1
UBE3B-202ENST00000342494 RGL2O15211 777 aa15.67■□□□□ 0.1
UBE3B-202ENST00000342494 EPB42P16452 691 aa15.67■□□□□ 0.1
UBE3B-202ENST00000342494 PTK6Q13882 451 aa15.67■□□□□ 0.1
UBE3B-202ENST00000342494 SEZ6Q53EL9 994 aa15.67■□□□□ 0.1
UBE3B-202ENST00000342494 ITIH2P19823 946 aa15.67■□□□□ 0.1
UBE3B-202ENST00000342494 EPC2Q52LR7 807 aa15.67■□□□□ 0.1
UBE3B-202ENST00000342494 ATP6V1G3Q96LB4 118 aa15.67■□□□□ 0.1
UBE3B-202ENST00000342494 TRAF3IP3Q9Y228 551 aa15.67■□□□□ 0.1
UBE3B-202ENST00000342494 LZTS3O60299 673 aaPredicted RBP15.66■□□□□ 0.1
UBE3B-202ENST00000342494 RPL10AP62906 217 aaKnown RBP15.66■□□□□ 0.1
UBE3B-202ENST00000342494 AP2B1P63010 937 aa15.66■□□□□ 0.1
UBE3B-202ENST00000342494 OCA2Q04671 838 aa15.66■□□□□ 0.1
UBE3B-202ENST00000342494 DEFB128Q7Z7B8 93 aa15.66■□□□□ 0.1
UBE3B-202ENST00000342494 USP13Q92995 863 aaPredicted RBP15.66■□□□□ 0.1
UBE3B-202ENST00000342494 PTGER2P43116 358 aa15.66■□□□□ 0.1
UBE3B-202ENST00000342494 NFIAQ12857 509 aa15.66■□□□□ 0.1
UBE3B-202ENST00000342494 NAB2Q15742 525 aa15.66■□□□□ 0.1
UBE3B-202ENST00000342494 TMC7Q7Z402 723 aa15.66■□□□□ 0.1
UBE3B-202ENST00000342494 STX19Q8N4C7 294 aa15.66■□□□□ 0.1
UBE3B-202ENST00000342494 AURKCQ9UQB9 309 aa15.66■□□□□ 0.1
UBE3B-202ENST00000342494 ZNF200P98182 395 aaPredicted RBP15.66■□□□□ 0.1
UBE3B-202ENST00000342494 MED21Q13503 144 aa15.66■□□□□ 0.1
UBE3B-202ENST00000342494 MTF1Q14872 753 aa15.66■□□□□ 0.1
UBE3B-202ENST00000342494 RABGAP1LQ5R372 815 aa15.66■□□□□ 0.1
UBE3B-202ENST00000342494 FEZF2Q8TBJ5 459 aa15.66■□□□□ 0.1
UBE3B-202ENST00000342494 TRPM5Q9NZQ8 1165 aa15.66■□□□□ 0.1
UBE3B-202ENST00000342494 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.66■□□□□ 0.1
UBE3B-202ENST00000342494 SNX12Q9UMY4 172 aa15.66■□□□□ 0.1
UBE3B-202ENST00000342494 CHMP2BQ9UQN3 213 aa15.66■□□□□ 0.1
UBE3B-202ENST00000342494 TRPM1Q7Z4N2 1603 aa15.66■□□□□ 0.1
UBE3B-202ENST00000342494 RHOBTB1O94844 696 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms