RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 THAP12O43422 761 aa14.82□□□□□ -0.04
PMS1-201ENST00000342075 XPOTO43592 962 aaKnown RBP14.82□□□□□ -0.04
PMS1-201ENST00000342075 ATP2C2O75185 946 aa14.82□□□□□ -0.04
PMS1-201ENST00000342075 CILPO75339 1184 aa14.82□□□□□ -0.04
PMS1-201ENST00000342075 WDR5P61964 334 aaKnown RBP14.82□□□□□ -0.04
PMS1-201ENST00000342075 SLC18A3Q16572 532 aa14.82□□□□□ -0.04
PMS1-201ENST00000342075 ENOSF1Q7L5Y1 443 aa14.82□□□□□ -0.04
PMS1-201ENST00000342075 COLGALT2Q8IYK4 626 aa14.82□□□□□ -0.04
PMS1-201ENST00000342075 PDCL2Q8N4E4 241 aa14.82□□□□□ -0.04
PMS1-201ENST00000342075 TAF4BQ92750 862 aa14.82□□□□□ -0.04
PMS1-201ENST00000342075 NRDE2Q9H7Z3 1164 aa14.82□□□□□ -0.04
PMS1-201ENST00000342075 FAM49BQ9NUQ9 324 aa14.82□□□□□ -0.04
PMS1-201ENST00000342075 EIF3CLB5ME19 914 aaKnown RBP14.82□□□□□ -0.04
PMS1-201ENST00000342075 ATMINO43313 823 aaPredicted RBP14.82□□□□□ -0.04
PMS1-201ENST00000342075 CYLC1P35663 651 aaPredicted RBP14.82□□□□□ -0.04
PMS1-201ENST00000342075 PSMC1P62191 440 aaKnown RBP14.82□□□□□ -0.04
PMS1-201ENST00000342075 ZNF365Q70YC5 407 aa14.82□□□□□ -0.04
PMS1-201ENST00000342075 ACOT1Q86TX2 421 aa14.82□□□□□ -0.04
PMS1-201ENST00000342075 TMEM199Q8N511 208 aa14.82□□□□□ -0.04
PMS1-201ENST00000342075 OR6B3Q8NGW1 331 aa14.82□□□□□ -0.04
PMS1-201ENST00000342075 EIF3CQ99613 913 aaKnown RBP14.82□□□□□ -0.04
PMS1-201ENST00000342075 SALL4Q9UJQ4 1053 aa14.82□□□□□ -0.04
PMS1-201ENST00000342075 NAGPAQ9UK23 515 aa14.82□□□□□ -0.04
PMS1-201ENST00000342075 PCDHA13Q9Y5I0 950 aa14.82□□□□□ -0.04
PMS1-201ENST00000342075 VWA8A3KMH1 1905 aa14.82□□□□□ -0.04
PMS1-201ENST00000342075 ZBBXA8MT70 800 aa14.82□□□□□ -0.04
PMS1-201ENST00000342075 CYB561D2O14569 222 aa14.82□□□□□ -0.04
PMS1-201ENST00000342075 CCDC175P0C221 793 aa14.82□□□□□ -0.04
PMS1-201ENST00000342075 CD19P15391 556 aa14.82□□□□□ -0.04
PMS1-201ENST00000342075 ARHGAP25P42331 645 aa14.82□□□□□ -0.04
PMS1-201ENST00000342075 DSC1Q08554 894 aa14.82□□□□□ -0.04
PMS1-201ENST00000342075 SENP8Q96LD8 212 aa14.82□□□□□ -0.04
PMS1-201ENST00000342075 CNTN6Q9UQ52 1028 aa14.82□□□□□ -0.04
PMS1-201ENST00000342075 XIRP2A4UGR9 3374 aa14.81□□□□□ -0.04
PMS1-201ENST00000342075 ABCB4P21439 1286 aa14.81□□□□□ -0.04
PMS1-201ENST00000342075 CCDC122Q5T0U0 273 aa14.81□□□□□ -0.04
PMS1-201ENST00000342075 CCDC170Q8IYT3 715 aa14.81□□□□□ -0.04
PMS1-201ENST00000342075 BCL7CQ8WUZ0 217 aaPredicted RBP14.81□□□□□ -0.04
PMS1-201ENST00000342075 CPA5Q8WXQ8 436 aa14.81□□□□□ -0.04
PMS1-201ENST00000342075 ZNF560Q96MR9 790 aa14.81□□□□□ -0.04
PMS1-201ENST00000342075 UBN1Q9NPG3 1134 aa14.81□□□□□ -0.04
PMS1-201ENST00000342075 TSC2P49815 1807 aa14.81□□□□□ -0.04
PMS1-201ENST00000342075 FANCGO15287 622 aa14.81□□□□□ -0.04
PMS1-201ENST00000342075 TNFAIP3P21580 790 aa14.81□□□□□ -0.04
PMS1-201ENST00000342075 SV2CQ496J9 727 aa14.81□□□□□ -0.04
PMS1-201ENST00000342075 KIAA0319Q5VV43 1072 aa14.81□□□□□ -0.04
PMS1-201ENST00000342075 ALKBH5Q6P6C2 394 aaKnown RBP14.81□□□□□ -0.04
PMS1-201ENST00000342075 NPAS4Q8IUM7 802 aa14.81□□□□□ -0.04
PMS1-201ENST00000342075 ADGRF2Q8IZF7 708 aa14.81□□□□□ -0.04
PMS1-201ENST00000342075 URGCPQ8TCY9 931 aa14.81□□□□□ -0.04
PMS1-201ENST00000342075 ZNF606Q8WXB4 792 aa14.81□□□□□ -0.04
PMS1-201ENST00000342075 CYFIP2Q96F07 1278 aa14.81□□□□□ -0.04
PMS1-201ENST00000342075 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.81□□□□□ -0.042e-8■□□□□ 9.3
PMS1-201ENST00000342075 PRKAG2Q9UGJ0 569 aa14.81□□□□□ -0.04
PMS1-201ENST00000342075 PAXBP1Q9Y5B6 917 aa14.81□□□□□ -0.04
PMS1-201ENST00000342075 MYH10P35580 1976 aa14.8□□□□□ -0.04
PMS1-201ENST00000342075 STAU1O95793 577 aaKnown RBP14.8□□□□□ -0.04
PMS1-201ENST00000342075 RABGGTBP53611 331 aa14.8□□□□□ -0.04
PMS1-201ENST00000342075 APPL2Q8NEU8 664 aa14.8□□□□□ -0.04
PMS1-201ENST00000342075 ELAC1Q9H777 363 aaKnown RBP14.8□□□□□ -0.04
PMS1-201ENST00000342075 INPPL1O15357 1258 aa14.8□□□□□ -0.04
PMS1-201ENST00000342075 SLC11A1P49279 550 aa14.8□□□□□ -0.04
PMS1-201ENST00000342075 CDR2Q01850 454 aa14.8□□□□□ -0.04
PMS1-201ENST00000342075 DSTYKQ6XUX3 929 aa14.8□□□□□ -0.04
PMS1-201ENST00000342075 KIAA1328Q86T90 577 aa14.8□□□□□ -0.04
PMS1-201ENST00000342075 DPF3Q92784 378 aa14.8□□□□□ -0.04
PMS1-201ENST00000342075 HEXIM2Q96MH2 286 aaKnown RBP14.8□□□□□ -0.04
PMS1-201ENST00000342075 GDAP2Q9NXN4 497 aa14.8□□□□□ -0.04
PMS1-201ENST00000342075 TJP2Q9UDY2 1190 aa14.8□□□□□ -0.04
PMS1-201ENST00000342075 BARX2Q9UMQ3 279 aaPredicted RBP14.8□□□□□ -0.04
PMS1-201ENST00000342075 NENFQ9UMX5 172 aa14.8□□□□□ -0.04
PMS1-201ENST00000342075 GUCA1BQ9UMX6 200 aa14.8□□□□□ -0.04
PMS1-201ENST00000342075 C5orf42Q9H799 3197 aa14.79□□□□□ -0.04
PMS1-201ENST00000342075 MACROD2A1Z1Q3 448 aa14.79□□□□□ -0.04
PMS1-201ENST00000342075 A8MXQ7 604 aa14.79□□□□□ -0.04
PMS1-201ENST00000342075 LCA5LO95447 670 aa14.79□□□□□ -0.04
PMS1-201ENST00000342075 PARNO95453 639 aaKnown RBP14.79□□□□□ -0.04
PMS1-201ENST00000342075 MAGEA1P43355 309 aa14.79□□□□□ -0.04
PMS1-201ENST00000342075 INCA1Q0VD86 236 aa14.79□□□□□ -0.04
PMS1-201ENST00000342075 SPA17Q15506 151 aa14.79□□□□□ -0.04
PMS1-201ENST00000342075 TOP1MTQ969P6 601 aa14.79□□□□□ -0.04
PMS1-201ENST00000342075 TMEM176AQ96HP8 235 aa14.79□□□□□ -0.04
PMS1-201ENST00000342075 TMEM209Q96SK2 561 aa14.79□□□□□ -0.04
PMS1-201ENST00000342075 IL23AQ9NPF7 189 aa14.79□□□□□ -0.04
PMS1-201ENST00000342075 PIK3R2O00459 728 aa14.79□□□□□ -0.04
PMS1-201ENST00000342075 NRP1O14786 923 aa14.79□□□□□ -0.04
PMS1-201ENST00000342075 HUS1O60921 280 aa14.79□□□□□ -0.04
PMS1-201ENST00000342075 DGKIO75912 1065 aa14.79□□□□□ -0.04
PMS1-201ENST00000342075 P4HA1P13674 534 aa14.79□□□□□ -0.04
PMS1-201ENST00000342075 CCDC130P13994 396 aa14.79□□□□□ -0.04
PMS1-201ENST00000342075 FPGSQ05932 587 aa14.79□□□□□ -0.04
PMS1-201ENST00000342075 PTPROQ16827 1216 aa14.79□□□□□ -0.04
PMS1-201ENST00000342075 NAA35Q5VZE5 725 aa14.79□□□□□ -0.04
PMS1-201ENST00000342075 FAM193BQ96PV7 902 aaPredicted RBP14.79□□□□□ -0.04
PMS1-201ENST00000342075 CYTH4Q9UIA0 394 aa14.79□□□□□ -0.04
PMS1-201ENST00000342075 BZW2Q9Y6E2 419 aaKnown RBP14.79□□□□□ -0.04
PMS1-201ENST00000342075 RFC2P35250 354 aa14.79□□□□□ -0.04
PMS1-201ENST00000342075 PNPLA4P41247 253 aa14.79□□□□□ -0.04
PMS1-201ENST00000342075 BMS1Q14692 1282 aaKnown RBP14.79□□□□□ -0.04
PMS1-201ENST00000342075 DENND1BQ6P3S1 775 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms