RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 ACTR2P61160 394 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 NFX1Q12986 1120 aaKnown RBP12.34□□□□□ -0.43
TRAK1-202ENST00000341421 EPS8L3Q8TE67 593 aaKnown RBP12.34□□□□□ -0.43
TRAK1-202ENST00000341421 EPS8L1Q8TE68 723 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 SEMA4AQ9H3S1 761 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 SLC5A4Q9NY91 659 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 ABLIM1O14639 778 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 RIPK2O43353 540 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 VHLP40337 213 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 TRADDQ15628 312 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 GEN1Q17RS7 908 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 SEPT1Q8WYJ6 367 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 RNF34Q969K3 372 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 OLFM3Q96PB7 478 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 C2CD2Q9Y426 696 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 PI4K2BG5E9Z4 385 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 GAS2O43903 313 aaKnown RBP12.33□□□□□ -0.44
TRAK1-202ENST00000341421 ZWINTO95229 277 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 OATP04181 439 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 NUDT17P0C025 328 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 IREB2P48200 963 aaKnown RBP12.33□□□□□ -0.44
TRAK1-202ENST00000341421 NCALDP61601 193 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 PDE1BQ01064 536 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 PGM5Q15124 567 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 CCDC125Q86Z20 511 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 SMC1BQ8NDV3 1235 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 BTBD6Q96KE9 485 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 CYTH2Q99418 400 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 NGRNQ9NPE2 291 aaKnown RBP12.33□□□□□ -0.44
TRAK1-202ENST00000341421 PDP2Q9P2J9 529 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 ZFP69BQ9UJL9 534 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 ZBTB39O15060 712 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 TTC4O95801 387 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 PYGMP11217 842 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 ESRRAP11474 423 aaPredicted RBP12.33□□□□□ -0.44
TRAK1-202ENST00000341421 TAL1P17542 331 aaPredicted RBP12.33□□□□□ -0.44
TRAK1-202ENST00000341421 RRM1P23921 792 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 RPL21P46778 160 aaKnown RBP12.33□□□□□ -0.44
TRAK1-202ENST00000341421 ROR1Q01973 937 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 PPP3CAQ08209 521 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 DUPD1Q68J44 220 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 FAM71AQ8IYT1 594 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 NME8Q8N427 588 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 LRRC57Q8N9N7 239 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 CHST13Q8NET6 341 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 RAB3IL1Q8TBN0 382 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 ZNF518BQ9C0D4 1074 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 AKAP11Q9UKA4 1901 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 WDR91A4D1P6 747 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 ACADSP16219 412 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 CALB2P22676 271 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 SLC30A10Q6XR72 485 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 FAM43BQ6ZT52 329 aaPredicted RBP12.33□□□□□ -0.44
TRAK1-202ENST00000341421 NOP9Q86U38 636 aaKnown RBP12.33□□□□□ -0.44
TRAK1-202ENST00000341421 MCOLN2Q8IZK6 566 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 ATXN2LQ8WWM7 1075 aaKnown RBP12.33□□□□□ -0.44
TRAK1-202ENST00000341421 MCEEQ96PE7 176 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 VPS33BQ9H267 617 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 CAPN9O14815 690 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 JAM2P57087 298 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 EPC2Q52LR7 807 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 RNF149Q8NC42 400 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 TARS2Q9BW92 718 aaKnown RBP12.33□□□□□ -0.44
TRAK1-202ENST00000341421 RNPEPL1Q9HAU8 725 aa12.33□□□□□ -0.44
TRAK1-202ENST00000341421 G3BP2Q9UN86 482 aaKnown RBP12.33□□□□□ -0.44
TRAK1-202ENST00000341421 GOLGA8MH3BSY2 632 aa12.32□□□□□ -0.44
TRAK1-202ENST00000341421 SPAG6O75602 509 aa12.32□□□□□ -0.44
TRAK1-202ENST00000341421 LYPLA2O95372 231 aa12.32□□□□□ -0.44
TRAK1-202ENST00000341421 C1QBPQ07021 282 aaKnown RBP12.32□□□□□ -0.44
TRAK1-202ENST00000341421 IER5Q5VY09 327 aa12.32□□□□□ -0.44
TRAK1-202ENST00000341421 CGRRF1Q99675 332 aa12.32□□□□□ -0.44
TRAK1-202ENST00000341421 MAGEA13PA6NCF6 341 aa12.32□□□□□ -0.44
TRAK1-202ENST00000341421 ARHGAP42A6NI28 874 aa12.32□□□□□ -0.44
TRAK1-202ENST00000341421 M0QYV0 167 aa12.32□□□□□ -0.44
TRAK1-202ENST00000341421 GYG2O15488 501 aa12.32□□□□□ -0.44
TRAK1-202ENST00000341421 TBC1D12O60347 775 aa12.32□□□□□ -0.44
TRAK1-202ENST00000341421 RARAP10276 462 aa12.32□□□□□ -0.44
TRAK1-202ENST00000341421 SDC4P31431 198 aa12.32□□□□□ -0.44
TRAK1-202ENST00000341421 GCLCP48506 637 aaPredicted RBP12.32□□□□□ -0.44
TRAK1-202ENST00000341421 STILQ15468 1287 aa12.32□□□□□ -0.44
TRAK1-202ENST00000341421 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.32□□□□□ -0.44
TRAK1-202ENST00000341421 TLDC1Q6P9B6 456 aa12.32□□□□□ -0.44
TRAK1-202ENST00000341421 RHPN2Q8IUC4 686 aa12.32□□□□□ -0.44
TRAK1-202ENST00000341421 STK32AQ8WU08 396 aa12.32□□□□□ -0.44
TRAK1-202ENST00000341421 NLRP7Q8WX94 980 aa12.32□□□□□ -0.44
TRAK1-202ENST00000341421 SHC3Q92529 594 aa12.32□□□□□ -0.44
TRAK1-202ENST00000341421 DCLRE1BQ9H816 532 aa12.32□□□□□ -0.44
TRAK1-202ENST00000341421 PCSK1NQ9UHG2 260 aa12.32□□□□□ -0.44
TRAK1-202ENST00000341421 PCDHA2Q9Y5H9 948 aa12.32□□□□□ -0.44
TRAK1-202ENST00000341421 DOT1LQ8TEK3 1739 aa12.32□□□□□ -0.44
TRAK1-202ENST00000341421 HAUS5O94927 633 aa12.32□□□□□ -0.44
TRAK1-202ENST00000341421 LSM8O95777 96 aaKnown RBP12.32□□□□□ -0.44
TRAK1-202ENST00000341421 SUPT20HL2P0C7V6 817 aa12.32□□□□□ -0.44
TRAK1-202ENST00000341421 HSP90AA5PQ58FG0 334 aa12.32□□□□□ -0.44
TRAK1-202ENST00000341421 PIK3R5Q8WYR1 880 aa12.32□□□□□ -0.44
TRAK1-202ENST00000341421 CFAP36Q96G28 342 aa12.32□□□□□ -0.44
TRAK1-202ENST00000341421 SNX25Q9H3E2 840 aa12.32□□□□□ -0.44
TRAK1-202ENST00000341421 SLC38A10Q9HBR0 1119 aa12.32□□□□□ -0.44
TRAK1-202ENST00000341421 UBR2Q8IWV8 1755 aa12.31□□□□□ -0.44
TRAK1-202ENST00000341421 SPAG7O75391 227 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms