RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 ADRB2P07550 413 aa11.15□□□□□ -0.62
TPM3-207ENST00000341372 ASIC1P78348 528 aa11.15□□□□□ -0.62
TPM3-207ENST00000341372 HYAL1Q12794 435 aa11.15□□□□□ -0.62
TPM3-207ENST00000341372 TEAD4Q15561 434 aa11.15□□□□□ -0.62
TPM3-207ENST00000341372 CTC1Q2NKJ3 1217 aa11.15□□□□□ -0.62
TPM3-207ENST00000341372 PPP4R4Q6NUP7 873 aa11.15□□□□□ -0.62
TPM3-207ENST00000341372 ADGRD2Q7Z7M1 963 aa11.15□□□□□ -0.62
TPM3-207ENST00000341372 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.15□□□□□ -0.62
TPM3-207ENST00000341372 PHC3Q8NDX5 983 aa11.15□□□□□ -0.62
TPM3-207ENST00000341372 PPP2R3CQ969Q6 453 aa11.15□□□□□ -0.62
TPM3-207ENST00000341372 TCHPQ9BT92 498 aa11.15□□□□□ -0.62
TPM3-207ENST00000341372 GOLPH3LQ9H4A5 285 aa11.15□□□□□ -0.62
TPM3-207ENST00000341372 IRAK3Q9Y616 596 aa11.15□□□□□ -0.62
TPM3-207ENST00000341372 PVALEFA0A1B0GWK0 134 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 ALG1L2C9J202 215 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 OGTO15294 1046 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 EIF3DO15371 548 aaKnown RBP eCLIP11.14□□□□□ -0.63
TPM3-207ENST00000341372 FBXO24O75426 580 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 GCNT3O95395 438 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 IL2RAP01589 272 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 RPLP1P05386 114 aaKnown RBP11.14□□□□□ -0.63
TPM3-207ENST00000341372 CLTAP09496 248 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 MYBP10242 640 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 KCNE1P15382 129 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 SYKP43405 635 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 NDUFA8P51970 172 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 YARSP54577 528 aaKnown RBP11.14□□□□□ -0.63
TPM3-207ENST00000341372 EPM2AIP1Q7L775 607 aaPredicted RBP11.14□□□□□ -0.63
TPM3-207ENST00000341372 VASH1Q7L8A9 365 aaPredicted RBP11.14□□□□□ -0.63
TPM3-207ENST00000341372 CEP57L1Q8IYX8 460 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 FSIP1Q8NA03 581 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 ATXN2LQ8WWM7 1075 aaKnown RBP11.14□□□□□ -0.63
TPM3-207ENST00000341372 PABPC5Q96DU9 382 aaKnown RBP11.14□□□□□ -0.63
TPM3-207ENST00000341372 PAGE5Q96GU1 130 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 ACAP3Q96P50 834 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 CDCA3Q99618 268 aaPredicted RBP11.14□□□□□ -0.63
TPM3-207ENST00000341372 TCF25Q9BQ70 676 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 AVENQ9NQS1 362 aaPredicted RBP11.14□□□□□ -0.63
TPM3-207ENST00000341372 ENAMQ9NRM1 1142 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 EXOC7Q9UPT5 735 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 PCDHGC5Q9Y5F6 944 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 UNC80Q8N2C7 3258 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 SMIM28A0A1B0GU29 152 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 FSD2A1L4K1 749 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 ANKRD63C9JTQ0 380 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 TMEM189-UBE2V1I3L0A0 370 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 KIF4AO95239 1232 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 CTSAP10619 480 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 OR1G1P47890 313 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 COPS2P61201 443 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 NFKB2Q00653 900 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 POU5F1Q01860 360 aaKnown RBP11.14□□□□□ -0.63
TPM3-207ENST00000341372 CUL4BQ13620 913 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 BRD3Q15059 726 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 TLR1Q15399 786 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 SLC10A6Q3KNW5 377 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 FAM26FQ5R3K3 315 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 SLFN12LQ6IEE8 588 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 GOLM1Q8NBJ4 401 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 GLIS3Q8NEA6 775 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 ACCSQ96QU6 501 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 HERC2P3Q9BVR0 1158 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 UBE2ZQ9H832 354 aaPredicted RBP11.14□□□□□ -0.63
TPM3-207ENST00000341372 PLEKHA5Q9HAU0 1116 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 TBC1D7Q9P0N9 293 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 PRG3Q9Y2Y8 225 aaPredicted RBP11.14□□□□□ -0.63
TPM3-207ENST00000341372 UBE4BO95155 1302 aa11.14□□□□□ -0.63
TPM3-207ENST00000341372 TTC26A0AVF1 554 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 KLRC4O43908 158 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 PF4P02776 101 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 SOD2P04179 222 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 HARSP12081 509 aaKnown RBP11.13□□□□□ -0.63
TPM3-207ENST00000341372 BDNFP23560 247 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 CASP1P29466 404 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 PMLP29590 882 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 ADSSP30520 456 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 AFMP43652 599 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 OSTNP61366 133 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 KCNC3Q14003 757 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 HSP90AA2PQ14568 343 aaPredicted RBP11.13□□□□□ -0.63
TPM3-207ENST00000341372 SMC1AQ14683 1233 aaKnown RBP11.13□□□□□ -0.63
TPM3-207ENST00000341372 DUSP6Q16828 381 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 GLRA4Q5JXX5 417 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 PLPP4Q5VZY2 271 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 STXBP4Q6ZWJ1 553 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 GPR65Q8IYL9 337 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 VPS52Q8N1B4 723 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 EFHBQ8N7U6 833 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 UROC1Q96N76 676 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 ZMAT2Q96NC0 199 aaKnown RBP11.13□□□□□ -0.63
TPM3-207ENST00000341372 TSPAN18Q96SJ8 248 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 COLEC11Q9BWP8 271 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 BLZF1Q9H2G9 400 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 TMEM206Q9H813 350 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 ENTPD7Q9NQZ7 604 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 SLC38A7Q9NVC3 462 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 CPSF3Q9UKF6 684 aaKnown RBP11.13□□□□□ -0.63
TPM3-207ENST00000341372 VWA8A3KMH1 1905 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 C2orf71A6NGG8 1288 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 TISP43B9A030 160 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms