RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 ARMC6Q6NXE6 501 aa11.9□□□□□ -0.5
TNC-201ENST00000341037 HHIPL2Q6UWX4 724 aa11.9□□□□□ -0.5
TNC-201ENST00000341037 ZNF34Q8IZ26 560 aa11.9□□□□□ -0.5
TNC-201ENST00000341037 SH2D3CQ8N5H7 860 aa11.9□□□□□ -0.5
TNC-201ENST00000341037 CCSER1Q9C0I3 900 aa11.9□□□□□ -0.5
TNC-201ENST00000341037 PRG3Q9Y2Y8 225 aaPredicted RBP11.9□□□□□ -0.5
TNC-201ENST00000341037 PITPNM2Q9BZ72 1349 aa11.9□□□□□ -0.5
TNC-201ENST00000341037 TARSL2A2RTX5 802 aaKnown RBP11.9□□□□□ -0.5
TNC-201ENST00000341037 SLC25A27O95847 323 aa11.9□□□□□ -0.5
TNC-201ENST00000341037 RALBP11234 206 aa11.9□□□□□ -0.5
TNC-201ENST00000341037 NBPF20Q3BBV1 942 aa11.9□□□□□ -0.5
TNC-201ENST00000341037 STX19Q8N4C7 294 aa11.9□□□□□ -0.5
TNC-201ENST00000341037 KCNH7Q9NS40 1196 aa11.9□□□□□ -0.5
TNC-201ENST00000341037 RHOBTB1O94844 696 aa11.9□□□□□ -0.51
TNC-201ENST00000341037 FKBP9O95302 570 aa11.9□□□□□ -0.51
TNC-201ENST00000341037 CHRM3P20309 590 aa11.9□□□□□ -0.51
TNC-201ENST00000341037 RAP1GDS1P52306 607 aa11.9□□□□□ -0.51
TNC-201ENST00000341037 STK4Q13043 487 aa11.9□□□□□ -0.51
TNC-201ENST00000341037 FKBP9P1Q75LS8 142 aa11.9□□□□□ -0.51
TNC-201ENST00000341037 ABCA6Q8N139 1617 aa11.9□□□□□ -0.51
TNC-201ENST00000341037 A0A1B0GTH6 734 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 EPB42P16452 691 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 MFSD4BQ5TF39 518 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 FAM151AQ8WW52 585 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 MRPL1Q9BYD6 325 aaKnown RBP11.89□□□□□ -0.51
TNC-201ENST00000341037 C6orf203Q9P0P8 240 aaPredicted RBP11.89□□□□□ -0.51
TNC-201ENST00000341037 PDS5AQ29RF7 1337 aaKnown RBP11.89□□□□□ -0.51
TNC-201ENST00000341037 CNTNAP5Q8WYK1 1306 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 RHOBTB3O94955 611 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 FCGRTP55899 365 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 SREBF2Q12772 1141 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 MED21Q13503 144 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 CLEC4FQ8N1N0 589 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 SYTL2Q9HCH5 934 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 ZDHHC9Q9Y397 364 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 FAM32AQ9Y421 112 aaKnown RBP11.89□□□□□ -0.51
TNC-201ENST00000341037 IGSF9BQ9UPX0 1349 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 ODC1P11926 461 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 YY1P25490 414 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 RAP1GAPP47736 663 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 IFNEQ86WN2 208 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 CELF4Q9BZC1 486 aaKnown RBP11.89□□□□□ -0.51
TNC-201ENST00000341037 DEFB129Q9H1M3 183 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 AIM2O14862 343 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 HBP1O60381 514 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 FAM200BP0CF97 657 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 PBLDP30039 288 aaPredicted RBP11.89□□□□□ -0.51
TNC-201ENST00000341037 GRAMD1AQ96CP6 724 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 ENTPD7Q9NQZ7 604 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 ITGA8P53708 1063 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 NPEPPSP55786 919 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 PDK1Q15118 436 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 C3orf62Q6ZUJ4 267 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 DENND5BQ6ZUT9 1274 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 HORMAD1Q86X24 394 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 SPATA16Q9BXB7 569 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 SHCBP1LQ9BZQ2 653 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 KCND2Q9NZV8 630 aa11.89□□□□□ -0.51
TNC-201ENST00000341037 RNF17Q9BXT8 1623 aaKnown RBP11.89□□□□□ -0.51
TNC-201ENST00000341037 TBX3O15119 743 aa11.88□□□□□ -0.51
TNC-201ENST00000341037 CARSP49589 748 aaKnown RBP11.88□□□□□ -0.51
TNC-201ENST00000341037 CDH18Q13634 790 aa11.88□□□□□ -0.51
TNC-201ENST00000341037 VPS72Q15906 364 aa11.88□□□□□ -0.51
TNC-201ENST00000341037 C1orf131Q8NDD1 294 aaKnown RBP11.88□□□□□ -0.51
TNC-201ENST00000341037 CHST13Q8NET6 341 aa11.88□□□□□ -0.51
TNC-201ENST00000341037 RBM12Q9NTZ6 932 aaKnown RBP11.88□□□□□ -0.51
TNC-201ENST00000341037 JCADQ9P266 1359 aa11.88□□□□□ -0.51
TNC-201ENST00000341037 EIF3DO15371 548 aaKnown RBP eCLIP11.88□□□□□ -0.51
TNC-201ENST00000341037 ITIH2P19823 946 aa11.88□□□□□ -0.51
TNC-201ENST00000341037 KLRK1P26718 216 aa11.88□□□□□ -0.51
TNC-201ENST00000341037 PCSK1P29120 753 aa11.88□□□□□ -0.51
TNC-201ENST00000341037 RABL6Q3YEC7 729 aaPredicted RBP11.88□□□□□ -0.51
TNC-201ENST00000341037 SMAD5Q99717 465 aaKnown RBP11.88□□□□□ -0.51
TNC-201ENST00000341037 ZNF556Q9HAH1 456 aa11.88□□□□□ -0.51
TNC-201ENST00000341037 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.88□□□□□ -0.51
TNC-201ENST00000341037 SPATA31A1Q5TZJ5 1347 aa11.88□□□□□ -0.51
TNC-201ENST00000341037 MYO1CO00159 1063 aa11.88□□□□□ -0.51
TNC-201ENST00000341037 CHUKO15111 745 aa11.88□□□□□ -0.51
TNC-201ENST00000341037 TBC1D4O60343 1298 aa11.88□□□□□ -0.51
TNC-201ENST00000341037 AGTP01019 485 aa11.88□□□□□ -0.51
TNC-201ENST00000341037 NAB2Q15742 525 aa11.88□□□□□ -0.51
TNC-201ENST00000341037 CNGA3Q16281 694 aa11.88□□□□□ -0.51
TNC-201ENST00000341037 BTNL9Q6UXG8 535 aa11.88□□□□□ -0.51
TNC-201ENST00000341037 HASPINQ8TF76 798 aa11.88□□□□□ -0.51
TNC-201ENST00000341037 BCORL1Q5H9F3 1711 aa11.88□□□□□ -0.51
TNC-201ENST00000341037 RAD51CO43502 376 aa11.88□□□□□ -0.51
TNC-201ENST00000341037 POLBP06746 335 aa11.88□□□□□ -0.51
TNC-201ENST00000341037 SF3B3Q15393 1217 aaKnown RBP11.88□□□□□ -0.51
TNC-201ENST00000341037 LAYNQ6UX15 382 aa11.88□□□□□ -0.51
TNC-201ENST00000341037 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.88□□□□□ -0.51
TNC-201ENST00000341037 TRIM48Q8IWZ4 208 aa11.88□□□□□ -0.51
TNC-201ENST00000341037 TFB1MQ8WVM0 346 aaKnown RBP11.88□□□□□ -0.51
TNC-201ENST00000341037 PRMT7Q9NVM4 692 aaPredicted RBP11.88□□□□□ -0.51
TNC-201ENST00000341037 TFR2Q9UP52 801 aa11.88□□□□□ -0.51
TNC-201ENST00000341037 NTSR2O95665 410 aa11.88□□□□□ -0.51
TNC-201ENST00000341037 VTNP04004 478 aa11.88□□□□□ -0.51
TNC-201ENST00000341037 ALDH7A1P49419 539 aaKnown RBP11.88□□□□□ -0.51
TNC-201ENST00000341037 SERPINB9P50453 376 aa11.88□□□□□ -0.51
TNC-201ENST00000341037 RNF180Q86T96 592 aa11.88□□□□□ -0.51
TNC-201ENST00000341037 TARS2Q9BW92 718 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms