RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 SLC38A10Q9HBR0 1119 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 SLCO1B3Q9NPD5 702 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 CLIC5Q9NZA1 410 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 ZNHIT2Q9UHR6 403 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 OGDHLQ9ULD0 1010 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 PAIP2BQ9ULR5 123 aaKnown RBP5.92□□□□□ -1.46
CSDE1-202ENST00000339438 GNEQ9Y223 722 aaKnown RBP5.92□□□□□ -1.46
CSDE1-202ENST00000339438 TDRKHQ9Y2W6 561 aaKnown RBP5.92□□□□□ -1.46
CSDE1-202ENST00000339438 NR2E3Q9Y5X4 410 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 GJA3Q9Y6H8 435 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 USH1CQ9Y6N9 552 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 TRIP11Q15643 1979 aa5.92□□□□□ -1.46
CSDE1-202ENST00000339438 SMIM31A0A1B0GVY4 71 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 CLRN2A0PK11 232 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 BICDL2A1A5D9 508 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 EDF1O60869 148 aaKnown RBP5.91□□□□□ -1.46
CSDE1-202ENST00000339438 PLEKHA8P1O95397 391 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 CD48P09326 243 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 CTNNA2P26232 953 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 PLTPP55058 493 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 ITGA9Q13797 1035 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 SIX1Q15475 284 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-202ENST00000339438 SLC9C1Q4G0N8 1177 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 KLHDC10Q6PID8 442 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 FOXR2Q6PJQ5 311 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 DHRS4L2Q6PKH6 230 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 TAOK1Q7L7X3 1001 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 ZNF654Q8IZM8 581 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 ATP11CQ8NB49 1132 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 GLIS3Q8NEA6 775 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 PXYLP1Q8TE99 480 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 NMD3Q96D46 503 aaKnown RBP5.91□□□□□ -1.46
CSDE1-202ENST00000339438 C18orf8Q96DM3 657 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 HSPBAP1Q96EW2 488 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 CENPKQ9BS16 269 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 ZNF341Q9BYN7 854 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 TMEM60Q9H2L4 133 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 SYNCQ9H7C4 482 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 MMRN2Q9H8L6 949 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 C17orf75Q9HAS0 396 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 MKNK2Q9HBH9 465 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 SAR1AQ9NR31 198 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 USP40Q9NVE5 1235 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 PI4KBQ9UBF8 816 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 PCYOX1Q9UHG3 505 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 NAGPAQ9UK23 515 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 PCDHGB4Q9UN71 923 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 STX8Q9UNK0 236 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 PLA2G4CQ9UP65 541 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 NUB1Q9Y5A7 615 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 PCDHGB5Q9Y5G0 923 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 A0A0A6YYK5 440 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-202ENST00000339438 SLC5A2P31639 672 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 HALP42357 657 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 TRAPPC10P48553 1259 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 RAP1GDS1P52306 607 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 KCNC4Q03721 635 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 TMEM132BQ14DG7 1078 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 SLC2A7Q6PXP3 512 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 PIK3AP1Q6ZUJ8 805 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 OTOP1Q7RTM1 612 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 TRIM22Q8IYM9 498 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 SHCBP1Q8NEM2 672 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 UHMK1Q8TAS1 419 aaKnown RBP5.91□□□□□ -1.46
CSDE1-202ENST00000339438 DGCR14Q96DF8 476 aaKnown RBP5.91□□□□□ -1.46
CSDE1-202ENST00000339438 LBHD1Q9BQE6 289 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-202ENST00000339438 BTBD10Q9BSF8 475 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 CRNKL1Q9BZJ0 848 aaKnown RBP5.91□□□□□ -1.46
CSDE1-202ENST00000339438 PFDN4Q9NQP4 134 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 PPP1R9AQ9ULJ8 1098 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 PHTF1Q9UMS5 762 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 SNX24Q9Y343 169 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 TELO2Q9Y4R8 837 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 RIPK3Q9Y572 518 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 SPO11Q9Y5K1 396 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 FAM187AA6NFU0 413 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 PEX10O60683 326 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 FGGP02679 453 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 HNRNPCP07910 306 aaKnown RBP eCLIP5.91□□□□□ -1.463e-6■■■□□ 18.5
CSDE1-202ENST00000339438 RGS2P41220 211 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 NPEPPSP55786 919 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 NOGQ13253 232 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 USP41Q3LFD5 358 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 SLC45A4Q5BKX6 768 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 TAPT1Q6NXT6 567 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 AADACL2Q6P093 401 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 NLRX1Q86UT6 975 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 CLEC10AQ8IUN9 316 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 SDR16C5Q8N3Y7 309 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 LINC01465Q8N7H1 131 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 PRELID2Q8N945 189 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 SHKBP1Q8TBC3 707 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 ALG3Q92685 438 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 EMID1Q96A84 441 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-202ENST00000339438 DDX27Q96GQ7 796 aaKnown RBP5.91□□□□□ -1.46
CSDE1-202ENST00000339438 OLFM3Q96PB7 478 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 SYT11Q9BT88 431 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 NT5C3AQ9H0P0 336 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 KCNK13Q9HB14 408 aa5.91□□□□□ -1.46
CSDE1-202ENST00000339438 TIMMDC1Q9NPL8 285 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms