RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 ATICP31939 592 aa18.21■□□□□ 0.51
ATAD3A-201ENST00000339113 GLRA4Q5JXX5 417 aa18.21■□□□□ 0.51
ATAD3A-201ENST00000339113 C1orf131Q8NDD1 294 aaKnown RBP18.21■□□□□ 0.51
ATAD3A-201ENST00000339113 FAM76AQ8TAV0 307 aa18.21■□□□□ 0.51
ATAD3A-201ENST00000339113 SNX27Q96L92 541 aa18.21■□□□□ 0.51
ATAD3A-201ENST00000339113 MTG1Q9BT17 334 aaPredicted RBP18.21■□□□□ 0.51
ATAD3A-201ENST00000339113 APOL6Q9BWW8 343 aa18.21■□□□□ 0.51
ATAD3A-201ENST00000339113 RNF39Q9H2S5 420 aa18.21■□□□□ 0.51
ATAD3A-201ENST00000339113 TTC7AQ9ULT0 858 aaPredicted RBP18.21■□□□□ 0.51
ATAD3A-201ENST00000339113 BRCA2P51587 3418 aa18.21■□□□□ 0.51
ATAD3A-201ENST00000339113 MIF4GDA9UHW6 222 aaKnown RBP18.21■□□□□ 0.51
ATAD3A-201ENST00000339113 KRIT1O00522 736 aa18.21■□□□□ 0.51
ATAD3A-201ENST00000339113 ELNP15502 786 aa18.21■□□□□ 0.51
ATAD3A-201ENST00000339113 CCND3P30281 292 aaPredicted RBP18.21■□□□□ 0.51
ATAD3A-201ENST00000339113 CRYBB1P53674 252 aaPredicted RBP18.21■□□□□ 0.51
ATAD3A-201ENST00000339113 NOGQ13253 232 aa18.21■□□□□ 0.51
ATAD3A-201ENST00000339113 MAMLD1Q13495 774 aa18.21■□□□□ 0.51
ATAD3A-201ENST00000339113 TTC31Q49AM3 519 aaPredicted RBP18.21■□□□□ 0.51
ATAD3A-201ENST00000339113 ADAT2Q7Z6V5 191 aaKnown RBP18.21■□□□□ 0.51
ATAD3A-201ENST00000339113 WNT8BQ93098 351 aa18.21■□□□□ 0.51
ATAD3A-201ENST00000339113 C18orf25Q96B23 403 aaPredicted RBP18.21■□□□□ 0.51
ATAD3A-201ENST00000339113 ZBTB9Q96C00 473 aa18.21■□□□□ 0.51
ATAD3A-201ENST00000339113 ELOVL4Q9GZR5 314 aa18.21■□□□□ 0.51
ATAD3A-201ENST00000339113 STIM2Q9P246 746 aa18.21■□□□□ 0.51
ATAD3A-201ENST00000339113 ITGA11Q9UKX5 1188 aa18.21■□□□□ 0.51
ATAD3A-201ENST00000339113 A6NNZ2 444 aa18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 SEPT4O43236 478 aa18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 RAD51CO43502 376 aa18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 SPOPO43791 374 aa18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 GNAT1P11488 350 aa18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 MMP8P22894 467 aa18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 RBP5P82980 135 aa18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 ZBTB6Q15916 424 aa18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 TUBB8Q3ZCM7 444 aa18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 UBXN11Q5T124 520 aa18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 DAB2IPQ5VWQ8 1189 aa18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 GDF6Q6KF10 455 aaPredicted RBP18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 ALKAL1Q6UXT8 129 aa18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 SLC4A11Q8NBS3 891 aa18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 TRIM11Q96F44 468 aa18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 VCPIP1Q96JH7 1222 aa18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 DDX47Q9H0S4 455 aaKnown RBP18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 UPF3AQ9H1J1 476 aaKnown RBP18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 PLEKHA5Q9HAU0 1116 aa18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 TUBGCP4Q9UGJ1 667 aa18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 GOLGA6BA6NDN3 693 aa18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 RECQL4O94761 1208 aa18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 PYGMP11217 842 aa18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 CD19P15391 556 aa18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 PCBP1Q15365 356 aaKnown RBP eCLIP18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 GLE1Q53GS7 698 aaKnown RBP18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 PLEKHA7Q6IQ23 1121 aa18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 DENND1BQ6P3S1 775 aa18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 CD302Q8IX05 232 aa18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 UBL4BQ8N7F7 174 aa18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 GDAP1L1Q96MZ0 367 aa18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 SH3GL2Q99962 352 aa18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 TRIM6Q9C030 488 aaPredicted RBP18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 WNT8AQ9H1J5 351 aa18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 KLK14Q9P0G3 267 aa18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 GTF2IRD1Q9UHL9 959 aa18.2■□□□□ 0.5
ATAD3A-201ENST00000339113 A0A087WUV0 522 aaPredicted RBP18.19■□□□□ 0.5
ATAD3A-201ENST00000339113 CILPO75339 1184 aa18.19■□□□□ 0.5
ATAD3A-201ENST00000339113 CTNNA1P35221 906 aaKnown RBP18.19■□□□□ 0.5
ATAD3A-201ENST00000339113 YWHAEP62258 255 aaKnown RBP18.19■□□□□ 0.5
ATAD3A-201ENST00000339113 C1QBPQ07021 282 aaKnown RBP18.19■□□□□ 0.5
ATAD3A-201ENST00000339113 TRADDQ15628 312 aa18.19■□□□□ 0.5
ATAD3A-201ENST00000339113 LIN9Q5TKA1 542 aa18.19■□□□□ 0.5
ATAD3A-201ENST00000339113 NT5DC4Q86YG4 428 aa18.19■□□□□ 0.5
ATAD3A-201ENST00000339113 NME8Q8N427 588 aa18.19■□□□□ 0.5
ATAD3A-201ENST00000339113 CAPNS2Q96L46 248 aa18.19■□□□□ 0.5
ATAD3A-201ENST00000339113 PCDHGC3Q9UN70 934 aa18.19■□□□□ 0.5
ATAD3A-201ENST00000339113 PCDHA3Q9Y5H8 950 aa18.19■□□□□ 0.5
ATAD3A-201ENST00000339113 ESYT3A0FGR9 886 aa18.18■□□□□ 0.5
ATAD3A-201ENST00000339113 GOLGA6CA6NDK9 693 aa18.18■□□□□ 0.5
ATAD3A-201ENST00000339113 SART1O43290 800 aaKnown RBP18.18■□□□□ 0.5
ATAD3A-201ENST00000339113 KPNA6O60684 536 aa18.18■□□□□ 0.5
ATAD3A-201ENST00000339113 ADAMTS4O75173 837 aa18.18■□□□□ 0.5
ATAD3A-201ENST00000339113 MYCNP04198 464 aaPredicted RBP18.18■□□□□ 0.5
ATAD3A-201ENST00000339113 GOLGA6DP0CG33 693 aa18.18■□□□□ 0.5
ATAD3A-201ENST00000339113 RARBP10826 455 aa18.18■□□□□ 0.5
ATAD3A-201ENST00000339113 AXLP30530 894 aa18.18■□□□□ 0.5
ATAD3A-201ENST00000339113 TNNC1P63316 161 aa18.18■□□□□ 0.5
ATAD3A-201ENST00000339113 SP3Q02447 781 aa18.18■□□□□ 0.5
ATAD3A-201ENST00000339113 CELF4Q9BZC1 486 aaKnown RBP18.18■□□□□ 0.5
ATAD3A-201ENST00000339113 ERVK-5Q9HDB9 667 aa18.18■□□□□ 0.5
ATAD3A-201ENST00000339113 GOLGA6AQ9NYA3 693 aa18.18■□□□□ 0.5
ATAD3A-201ENST00000339113 CYTH4Q9UIA0 394 aa18.18■□□□□ 0.5
ATAD3A-201ENST00000339113 CITO14578 2027 aa18.18■□□□□ 0.5
ATAD3A-201ENST00000339113 CEP350Q5VT06 3117 aa18.18■□□□□ 0.5
ATAD3A-201ENST00000339113 GOLGA8KD6RF30 607 aa18.18■□□□□ 0.5
ATAD3A-201ENST00000339113 MYO1FO00160 1098 aa18.18■□□□□ 0.5
ATAD3A-201ENST00000339113 HEXIM1O94992 359 aaKnown RBP18.18■□□□□ 0.5
ATAD3A-201ENST00000339113 YARSP54577 528 aaKnown RBP18.18■□□□□ 0.5
ATAD3A-201ENST00000339113 TRIP11Q15643 1979 aa18.18■□□□□ 0.5
ATAD3A-201ENST00000339113 DEFB115Q30KQ5 88 aa18.18■□□□□ 0.5
ATAD3A-201ENST00000339113 PACS2Q86VP3 889 aa18.18■□□□□ 0.5
ATAD3A-201ENST00000339113 FAM228AQ86W67 206 aa18.18■□□□□ 0.5
ATAD3A-201ENST00000339113 ZDHHC14Q8IZN3 488 aa18.18■□□□□ 0.5
ATAD3A-201ENST00000339113 TMEM35BQ8NCS4 154 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms