RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 ARSHQ5FYA8 562 aa16.96■□□□□ 0.31
LINC01116-202ENST00000339037 CENPPQ6IPU0 288 aa16.96■□□□□ 0.31
LINC01116-202ENST00000339037 PRR23BQ6ZRT6 265 aa16.96■□□□□ 0.31
LINC01116-202ENST00000339037 SPEM1Q8N4L4 309 aa16.96■□□□□ 0.31
LINC01116-202ENST00000339037 ATAD1Q8NBU5 361 aa16.96■□□□□ 0.31
LINC01116-202ENST00000339037 KCNN1Q92952 543 aa16.96■□□□□ 0.31
LINC01116-202ENST00000339037 PSMG2Q969U7 264 aa16.96■□□□□ 0.31
LINC01116-202ENST00000339037 TSPAN18Q96SJ8 248 aa16.96■□□□□ 0.31
LINC01116-202ENST00000339037 REEP2Q9BRK0 252 aa16.96■□□□□ 0.31
LINC01116-202ENST00000339037 C8orf33Q9H7E9 229 aaPredicted RBP16.96■□□□□ 0.31
LINC01116-202ENST00000339037 RPF1Q9H9Y2 349 aaKnown RBP16.96■□□□□ 0.31
LINC01116-202ENST00000339037 PARD6AQ9NPB6 346 aa16.96■□□□□ 0.31
LINC01116-202ENST00000339037 TBX20Q9UMR3 447 aa16.96■□□□□ 0.31
LINC01116-202ENST00000339037 SLC27A5Q9Y2P5 690 aa16.96■□□□□ 0.31
LINC01116-202ENST00000339037 ASB3Q9Y575 518 aa16.96■□□□□ 0.31
LINC01116-202ENST00000339037 K7ENM7 598 aa16.95■□□□□ 0.3
LINC01116-202ENST00000339037 SOX9P48436 509 aa16.95■□□□□ 0.3
LINC01116-202ENST00000339037 LILRA4P59901 499 aa16.95■□□□□ 0.3
LINC01116-202ENST00000339037 SPATA1Q5VX52 437 aa16.95■□□□□ 0.3
LINC01116-202ENST00000339037 ARL6IP4Q66PJ3 421 aaKnown RBP16.95■□□□□ 0.3
LINC01116-202ENST00000339037 ARMCX5Q6P1M9 558 aa16.95■□□□□ 0.3
LINC01116-202ENST00000339037 GAREM2Q75VX8 874 aa16.95■□□□□ 0.3
LINC01116-202ENST00000339037 DNAJB7Q7Z6W7 309 aaPredicted RBP16.95■□□□□ 0.3
LINC01116-202ENST00000339037 ARID3BQ8IVW6 561 aaPredicted RBP16.95■□□□□ 0.3
LINC01116-202ENST00000339037 TTC9BQ8N6N2 239 aa16.95■□□□□ 0.3
LINC01116-202ENST00000339037 MSTO1Q9BUK6 570 aa16.95■□□□□ 0.3
LINC01116-202ENST00000339037 A0A0B4J269 797 aa16.94■□□□□ 0.3
LINC01116-202ENST00000339037 DPYSL4O14531 572 aa16.94■□□□□ 0.3
LINC01116-202ENST00000339037 PPEF2O14830 753 aa16.94■□□□□ 0.3
LINC01116-202ENST00000339037 SOAT2O75908 522 aa16.94■□□□□ 0.3
LINC01116-202ENST00000339037 FGF19O95750 216 aa16.94■□□□□ 0.3
LINC01116-202ENST00000339037 PIGRP01833 764 aa16.94■□□□□ 0.3
LINC01116-202ENST00000339037 RETP07949 1114 aa16.94■□□□□ 0.3
LINC01116-202ENST00000339037 PAX3P23760 479 aa16.94■□□□□ 0.3
LINC01116-202ENST00000339037 SPEM2Q0P670 501 aa16.94■□□□□ 0.3
LINC01116-202ENST00000339037 JADE1Q6IE81 842 aa16.94■□□□□ 0.3
LINC01116-202ENST00000339037 ITIH5Q86UX2 942 aa16.94■□□□□ 0.3
LINC01116-202ENST00000339037 GPBP1Q86WP2 473 aa16.94■□□□□ 0.3
LINC01116-202ENST00000339037 RALGPS2Q86X27 583 aaPredicted RBP16.94■□□□□ 0.3
LINC01116-202ENST00000339037 GPIHBP1Q8IV16 184 aa16.94■□□□□ 0.3
LINC01116-202ENST00000339037 MYCT1Q8N699 235 aa16.94■□□□□ 0.3
LINC01116-202ENST00000339037 FAM200AQ8TCP9 573 aa16.94■□□□□ 0.3
LINC01116-202ENST00000339037 TMX3Q96JJ7 454 aa16.94■□□□□ 0.3
LINC01116-202ENST00000339037 SENP8Q96LD8 212 aa16.94■□□□□ 0.3
LINC01116-202ENST00000339037 AK8Q96MA6 479 aa16.94■□□□□ 0.3
LINC01116-202ENST00000339037 RTKNQ9BST9 563 aa16.94■□□□□ 0.3
LINC01116-202ENST00000339037 MKNK1Q9BUB5 465 aa16.94■□□□□ 0.3
LINC01116-202ENST00000339037 ATXN3LQ9H3M9 355 aa16.94■□□□□ 0.3
LINC01116-202ENST00000339037 PARVGQ9HBI0 331 aa16.94■□□□□ 0.3
LINC01116-202ENST00000339037 RBM12Q9NTZ6 932 aaKnown RBP16.94■□□□□ 0.3
LINC01116-202ENST00000339037 KMT2BQ9UMN6 2715 aaPredicted RBP16.93■□□□□ 0.3
LINC01116-202ENST00000339037 MYBPHLA2RUH7 354 aa16.93■□□□□ 0.3
LINC01116-202ENST00000339037 SPECC1L-ADORA2AF8WAN1 911 aa16.93■□□□□ 0.3
LINC01116-202ENST00000339037 H3BQV1 296 aa16.93■□□□□ 0.3
LINC01116-202ENST00000339037 FAM13AO94988 1023 aa16.93■□□□□ 0.3
LINC01116-202ENST00000339037 ADRB2P07550 413 aa16.93■□□□□ 0.3
LINC01116-202ENST00000339037 GABRR2P28476 465 aa16.93■□□□□ 0.3
LINC01116-202ENST00000339037 CTHP32929 405 aa16.93■□□□□ 0.3
LINC01116-202ENST00000339037 ZNF131P52739 623 aa16.93■□□□□ 0.3
LINC01116-202ENST00000339037 SIM2Q14190 667 aaPredicted RBP16.93■□□□□ 0.3
LINC01116-202ENST00000339037 VEPH1Q14D04 833 aa16.93■□□□□ 0.3
LINC01116-202ENST00000339037 ARHGAP29Q52LW3 1261 aa16.93■□□□□ 0.3
LINC01116-202ENST00000339037 ARHGAP15Q53QZ3 475 aa16.93■□□□□ 0.3
LINC01116-202ENST00000339037 GPR158Q5T848 1215 aa16.93■□□□□ 0.3
LINC01116-202ENST00000339037 C9orf57Q5W0N0 161 aa16.93■□□□□ 0.3
LINC01116-202ENST00000339037 TXNDC11Q6PKC3 985 aa16.93■□□□□ 0.3
LINC01116-202ENST00000339037 Q6ZS52 159 aa16.93■□□□□ 0.3
LINC01116-202ENST00000339037 CD302Q8IX05 232 aa16.93■□□□□ 0.3
LINC01116-202ENST00000339037 CALML4Q96GE6 196 aa16.93■□□□□ 0.3
LINC01116-202ENST00000339037 ZFYVE19Q96K21 471 aa16.93■□□□□ 0.3
LINC01116-202ENST00000339037 LRRC3BQ96PB8 259 aa16.93■□□□□ 0.3
LINC01116-202ENST00000339037 TMEM209Q96SK2 561 aa16.93■□□□□ 0.3
LINC01116-202ENST00000339037 SEPT5Q99719 369 aaPredicted RBP16.93■□□□□ 0.3
LINC01116-202ENST00000339037 HSFX1Q9UBD0 423 aa16.93■□□□□ 0.3
LINC01116-202ENST00000339037 CPSF3Q9UKF6 684 aaKnown RBP16.93■□□□□ 0.3
LINC01116-202ENST00000339037 DCDC2BA2VCK2 349 aa16.92■□□□□ 0.3
LINC01116-202ENST00000339037 CHURC1-FNTBB4DL54 471 aa16.92■□□□□ 0.3
LINC01116-202ENST00000339037 SLC26A4O43511 780 aa16.92■□□□□ 0.3
LINC01116-202ENST00000339037 LRP3O75074 770 aa16.92■□□□□ 0.3
LINC01116-202ENST00000339037 PAPSS2O95340 614 aaPredicted RBP16.92■□□□□ 0.3
LINC01116-202ENST00000339037 PRAMEF12O95522 483 aa16.92■□□□□ 0.3
LINC01116-202ENST00000339037 NFICP08651 508 aa16.92■□□□□ 0.3
LINC01116-202ENST00000339037 GJB2P29033 226 aa16.92■□□□□ 0.3
LINC01116-202ENST00000339037 UBA7P41226 1012 aa16.92■□□□□ 0.3
LINC01116-202ENST00000339037 FNTBP49356 437 aa16.92■□□□□ 0.3
LINC01116-202ENST00000339037 DHX8Q14562 1220 aaKnown RBP16.92■□□□□ 0.3
LINC01116-202ENST00000339037 TMEM132DQ14C87 1099 aa16.92■□□□□ 0.3
LINC01116-202ENST00000339037 SLC39A12Q504Y0 691 aa16.92■□□□□ 0.3
LINC01116-202ENST00000339037 DGKKQ5KSL6 1271 aa16.92■□□□□ 0.3
LINC01116-202ENST00000339037 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.92■□□□□ 0.3
LINC01116-202ENST00000339037 OR10T2Q8NGX3 314 aa16.92■□□□□ 0.3
LINC01116-202ENST00000339037 TTC8Q8TAM2 541 aa16.92■□□□□ 0.3
LINC01116-202ENST00000339037 GCNAQ96QF7 691 aa16.92■□□□□ 0.3
LINC01116-202ENST00000339037 OBP2AQ9NY56 170 aa16.92■□□□□ 0.3
LINC01116-202ENST00000339037 GTSE1Q9NYZ3 720 aa16.92■□□□□ 0.3
LINC01116-202ENST00000339037 DSEQ9UL01 958 aa16.92■□□□□ 0.3
LINC01116-202ENST00000339037 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.92■□□□□ 0.3
LINC01116-202ENST00000339037 CEP295Q9C0D2 2601 aa16.92■□□□□ 0.3
LINC01116-202ENST00000339037 CFAP47Q6ZTR5 3102 aa16.92■□□□□ 0.3
LINC01116-202ENST00000339037 ANK1P16157 1881 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms