RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 CASP4P49662 377 aa12.17□□□□□ -0.46
SLC28A1-202ENST00000338602 VAMP7P51809 220 aa12.17□□□□□ -0.46
SLC28A1-202ENST00000338602 TNNC1P63316 161 aa12.17□□□□□ -0.46
SLC28A1-202ENST00000338602 LRRC63Q05C16 580 aa12.17□□□□□ -0.46
SLC28A1-202ENST00000338602 ENPEPQ07075 957 aa12.17□□□□□ -0.46
SLC28A1-202ENST00000338602 IQCEQ6IPM2 695 aa12.17□□□□□ -0.46
SLC28A1-202ENST00000338602 CLEC17AQ6ZS10 378 aa12.17□□□□□ -0.46
SLC28A1-202ENST00000338602 C2orf15Q8WU43 125 aaKnown RBP12.17□□□□□ -0.46
SLC28A1-202ENST00000338602 ERCC4Q92889 916 aaPredicted RBP12.17□□□□□ -0.46
SLC28A1-202ENST00000338602 ZNF707Q96C28 371 aaPredicted RBP12.17□□□□□ -0.46
SLC28A1-202ENST00000338602 BORCS6Q96GS4 357 aa12.17□□□□□ -0.46
SLC28A1-202ENST00000338602 DHTKD1Q96HY7 919 aaPredicted RBP12.17□□□□□ -0.46
SLC28A1-202ENST00000338602 MKNK1Q9BUB5 465 aa12.17□□□□□ -0.46
SLC28A1-202ENST00000338602 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.17□□□□□ -0.46
SLC28A1-202ENST00000338602 SIX4Q9UIU6 781 aa12.17□□□□□ -0.46
SLC28A1-202ENST00000338602 MAN1B1Q9UKM7 699 aa12.17□□□□□ -0.46
SLC28A1-202ENST00000338602 PLXNA3P51805 1871 aa12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 CLUHO75153 1309 aa12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 PTPRJQ12913 1337 aa12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 MTCL1Q9Y4B5 1905 aaKnown RBP12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 LRRIQ3A6PVS8 624 aaPredicted RBP12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 CCL16O15467 120 aa12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 STX10O60499 249 aa12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 FAM163BP0C2L3 166 aa12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 P4HA1P13674 534 aa12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 PTPN2P17706 415 aa12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 PCSK1P29120 753 aa12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 GBP2P32456 591 aaPredicted RBP12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 ALDH1A3P47895 512 aa12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 TUFMP49411 452 aaKnown RBP12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 CLDN10P78369 228 aa12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 FKBP3Q00688 224 aaKnown RBP12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 NFE2Q16621 373 aaPredicted RBP12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 CENPPQ6IPU0 288 aa12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 RNF19BQ6ZMZ0 732 aa12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 RNF135Q8IUD6 432 aa12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 ADGRF2Q8IZF7 708 aa12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 ZDHHC14Q8IZN3 488 aa12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 ADSSL1Q8N142 457 aa12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 PDCL2Q8N4E4 241 aa12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 TRIML1Q8N9V2 468 aa12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 CXorf38Q8TB03 319 aa12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 ZNF512Q96ME7 567 aaPredicted RBP12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 MMS19Q96T76 1030 aa12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 ACBD6Q9BR61 282 aa12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 CD320Q9NPF0 282 aa12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 DDX43Q9NXZ2 648 aaKnown RBP12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 HSFX1Q9UBD0 423 aa12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 CDH22Q9UJ99 828 aa12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 INSL5Q9Y5Q6 135 aa12.16□□□□□ -0.46
SLC28A1-202ENST00000338602 BICDL2A1A5D9 508 aa12.15□□□□□ -0.46
SLC28A1-202ENST00000338602 FAM86C2PA6NEL3 165 aa12.15□□□□□ -0.46
SLC28A1-202ENST00000338602 ZNF197O14709 1029 aa12.15□□□□□ -0.46
SLC28A1-202ENST00000338602 DCXO43602 365 aa12.15□□□□□ -0.46
SLC28A1-202ENST00000338602 AKAP3O75969 853 aa12.15□□□□□ -0.46
SLC28A1-202ENST00000338602 STAU1O95793 577 aaKnown RBP12.15□□□□□ -0.46
SLC28A1-202ENST00000338602 CST3P01034 146 aaPredicted RBP12.15□□□□□ -0.46
SLC28A1-202ENST00000338602 SP100P23497 879 aaPredicted RBP12.15□□□□□ -0.46
SLC28A1-202ENST00000338602 FSHRP23945 695 aa12.15□□□□□ -0.46
SLC28A1-202ENST00000338602 CCNE1P24864 410 aa12.15□□□□□ -0.46
SLC28A1-202ENST00000338602 EPHB3P54753 998 aa12.15□□□□□ -0.46
SLC28A1-202ENST00000338602 DUSP4Q13115 394 aa12.15□□□□□ -0.46
SLC28A1-202ENST00000338602 NCOA4Q13772 614 aa12.15□□□□□ -0.46
SLC28A1-202ENST00000338602 WDR72Q3MJ13 1102 aa12.15□□□□□ -0.46
SLC28A1-202ENST00000338602 SLC39A12Q504Y0 691 aa12.15□□□□□ -0.46
SLC28A1-202ENST00000338602 ZCWPW2Q504Y3 356 aa12.15□□□□□ -0.46
SLC28A1-202ENST00000338602 CYP4A22Q5TCH4 519 aa12.15□□□□□ -0.46
SLC28A1-202ENST00000338602 ISM2Q6H9L7 571 aa12.15□□□□□ -0.46
SLC28A1-202ENST00000338602 GRASPQ7Z6J2 395 aaPredicted RBP12.15□□□□□ -0.46
SLC28A1-202ENST00000338602 CCDC150Q8NCX0 1101 aa12.15□□□□□ -0.46
SLC28A1-202ENST00000338602 SPPL2BQ8TCT7 592 aa12.15□□□□□ -0.46
SLC28A1-202ENST00000338602 PGLYRP2Q96PD5 576 aa12.15□□□□□ -0.46
SLC28A1-202ENST00000338602 IMPG2Q9BZV3 1241 aa12.15□□□□□ -0.46
SLC28A1-202ENST00000338602 ZCWPW1Q9H0M4 648 aa12.15□□□□□ -0.46
SLC28A1-202ENST00000338602 SNX25Q9H3E2 840 aa12.15□□□□□ -0.46
SLC28A1-202ENST00000338602 C11orf16Q9NQ32 467 aa12.15□□□□□ -0.46
SLC28A1-202ENST00000338602 KIAA1468Q9P260 1216 aa12.15□□□□□ -0.46
SLC28A1-202ENST00000338602 L1RE1Q9UN81 338 aa12.15□□□□□ -0.46
SLC28A1-202ENST00000338602 ZFP37Q9Y6Q3 630 aaPredicted RBP12.15□□□□□ -0.46
SLC28A1-202ENST00000338602 SCN1AP35498 2009 aa12.14□□□□□ -0.47
SLC28A1-202ENST00000338602 C2CD4DB7Z1M9 353 aa12.14□□□□□ -0.47
SLC28A1-202ENST00000338602 PI4K2BG5E9Z4 385 aa12.14□□□□□ -0.47
SLC28A1-202ENST00000338602 BIN1O00499 593 aa12.14□□□□□ -0.47
SLC28A1-202ENST00000338602 SLC16A3O15427 465 aaKnown RBP12.14□□□□□ -0.47
SLC28A1-202ENST00000338602 SEC24AO95486 1093 aa12.14□□□□□ -0.47
SLC28A1-202ENST00000338602 C4BPAP04003 597 aaKnown RBP12.14□□□□□ -0.47
SLC28A1-202ENST00000338602 OR4Q2P0C623 313 aa12.14□□□□□ -0.47
SLC28A1-202ENST00000338602 TRIM21P19474 475 aaKnown RBP12.14□□□□□ -0.47
SLC28A1-202ENST00000338602 GTF2H1P32780 548 aa12.14□□□□□ -0.47
SLC28A1-202ENST00000338602 MYL6P60660 151 aa12.14□□□□□ -0.47
SLC28A1-202ENST00000338602 TWF1Q12792 350 aa12.14□□□□□ -0.47
SLC28A1-202ENST00000338602 MORC3Q14149 939 aa12.14□□□□□ -0.47
SLC28A1-202ENST00000338602 VEPH1Q14D04 833 aa12.14□□□□□ -0.47
SLC28A1-202ENST00000338602 MAPRE1Q15691 268 aaKnown RBP12.14□□□□□ -0.47
SLC28A1-202ENST00000338602 CAMK4Q16566 473 aa12.14□□□□□ -0.47
SLC28A1-202ENST00000338602 SGSM1Q2NKQ1 1148 aa12.14□□□□□ -0.47
SLC28A1-202ENST00000338602 ZNF699Q32M78 642 aa12.14□□□□□ -0.47
SLC28A1-202ENST00000338602 PABPC1LQ4VXU2 614 aaKnown RBP12.14□□□□□ -0.47
SLC28A1-202ENST00000338602 ZNF667Q5HYK9 610 aa12.14□□□□□ -0.47
SLC28A1-202ENST00000338602 ANKRD40Q6AI12 368 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms