RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 SH3GL2Q99962 352 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 DUX4Q9UBX2 424 aa12.29□□□□□ -0.44
SHANK2-201ENST00000338508 CHORDC1Q9UHD1 332 aaPredicted RBP12.29□□□□□ -0.44
SHANK2-201ENST00000338508 ATMINO43313 823 aaPredicted RBP12.28□□□□□ -0.44
SHANK2-201ENST00000338508 NUP62P37198 522 aaPredicted RBP12.28□□□□□ -0.44
SHANK2-201ENST00000338508 CPA2P48052 419 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 ATN1P54259 1190 aaPredicted RBP12.28□□□□□ -0.44
SHANK2-201ENST00000338508 KCNK10P57789 538 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 AKIRIN2Q53H80 203 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 CCDC149Q6ZUS6 474 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 LDHDQ86WU2 507 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 MICU2Q8IYU8 434 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 NBPF15Q8N660 670 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 WWP1Q9H0M0 922 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 RSPH9Q9H1X1 276 aaPredicted RBP12.28□□□□□ -0.44
SHANK2-201ENST00000338508 A0A087X0T9 212 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 ATP8B1O43520 1251 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 ITGAXP20702 1163 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 NCOA4Q13772 614 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 TRADDQ15628 312 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 GLB1LQ6UWU2 654 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 PROM2Q8N271 834 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 PI4K2AQ9BTU6 479 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 RCOR1Q9UKL0 485 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 NBPF26B4DH59 902 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 SMNDC1O75940 238 aaKnown RBP eCLIP12.28□□□□□ -0.44
SHANK2-201ENST00000338508 CAMK2GQ13555 558 aaPredicted RBP12.28□□□□□ -0.44
SHANK2-201ENST00000338508 GLRA4Q5JXX5 417 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 TRIM65Q6PJ69 517 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 LOC100653049A0A140TA62 436 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 KRT34O76011 436 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 NPTXRO95502 500 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 ALDH9A1P49189 494 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 TRIM25Q14258 630 aaKnown RBP12.28□□□□□ -0.44
SHANK2-201ENST00000338508 DDI2Q5TDH0 399 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 TRIM72Q6ZMU5 477 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 PRPF39Q86UA1 669 aaKnown RBP12.28□□□□□ -0.44
SHANK2-201ENST00000338508 FAM20AQ96MK3 541 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 ZFYVE28Q9HCC9 887 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 TMEM94Q12767 1356 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 RTN2O75298 545 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 NUDT14O95848 222 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 RBP5P82980 135 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 CNTN1Q12860 1018 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 B3GALNT2Q8NCR0 500 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 NACC2Q96BF6 587 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 RNPC3Q96LT9 517 aaKnown RBP12.28□□□□□ -0.44
SHANK2-201ENST00000338508 CCDC3Q9BQI4 270 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 NDOR1Q9UHB4 597 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 CFAP99D6REC4 459 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 HSMCR30P0CW71 290 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 TAP1Q03518 808 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 EFCAB12Q6NXP0 572 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 C3orf62Q6ZUJ4 267 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 OLFM3Q96PB7 478 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 EPN3Q9H201 632 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 CATSPERBQ9H7T0 1116 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 OLFML3Q9NRN5 406 aa12.28□□□□□ -0.44
SHANK2-201ENST00000338508 MRPL42Q9Y6G3 142 aaKnown RBP12.28□□□□□ -0.44
SHANK2-201ENST00000338508 PCDH8O95206 1070 aa12.27□□□□□ -0.44
SHANK2-201ENST00000338508 AKR1B1P15121 316 aa12.27□□□□□ -0.44
SHANK2-201ENST00000338508 DPYDQ12882 1025 aa12.27□□□□□ -0.44
SHANK2-201ENST00000338508 GNASQ5JWF2 1037 aa12.27□□□□□ -0.44
SHANK2-201ENST00000338508 MROH9Q5TGP6 573 aa12.27□□□□□ -0.44
SHANK2-201ENST00000338508 TDRD10Q5VZ19 366 aaKnown RBP12.27□□□□□ -0.44
SHANK2-201ENST00000338508 SCARA3Q6AZY7 606 aa12.27□□□□□ -0.44
SHANK2-201ENST00000338508 SLC35G2Q8TBE7 412 aa12.27□□□□□ -0.44
SHANK2-201ENST00000338508 IL17RAQ96F46 866 aa12.27□□□□□ -0.44
SHANK2-201ENST00000338508 TRIM51Q9BSJ1 452 aa12.27□□□□□ -0.44
SHANK2-201ENST00000338508 KATNAL1Q9BW62 490 aa12.27□□□□□ -0.44
SHANK2-201ENST00000338508 MRPS26Q9BYN8 205 aaKnown RBP12.27□□□□□ -0.44
SHANK2-201ENST00000338508 ATP6V1HQ9UI12 483 aa12.27□□□□□ -0.44
SHANK2-201ENST00000338508 RNF112Q9ULX5 631 aa12.27□□□□□ -0.44
SHANK2-201ENST00000338508 ATP6V1B1P15313 513 aa12.27□□□□□ -0.44
SHANK2-201ENST00000338508 GTF2E2P29084 291 aaKnown RBP12.27□□□□□ -0.44
SHANK2-201ENST00000338508 THPOP40225 353 aa12.27□□□□□ -0.44
SHANK2-201ENST00000338508 PTPN12Q05209 780 aaKnown RBP12.27□□□□□ -0.44
SHANK2-201ENST00000338508 BFSP2Q13515 415 aa12.27□□□□□ -0.44
SHANK2-201ENST00000338508 MICALL2Q8IY33 904 aa12.27□□□□□ -0.44
SHANK2-201ENST00000338508 PCYOX1LQ8NBM8 494 aa12.27□□□□□ -0.44
SHANK2-201ENST00000338508 MED8Q96G25 268 aa12.27□□□□□ -0.44
SHANK2-201ENST00000338508 MXD3Q9BW11 206 aa12.27□□□□□ -0.44
SHANK2-201ENST00000338508 METTL5Q9NRN9 209 aaKnown RBP12.27□□□□□ -0.44
SHANK2-201ENST00000338508 PRR12Q9ULL5 1215 aa12.27□□□□□ -0.44
SHANK2-201ENST00000338508 ABCC2Q92887 1545 aa12.27□□□□□ -0.45
SHANK2-201ENST00000338508 C16orf96A6NNT2 1141 aa12.27□□□□□ -0.45
SHANK2-201ENST00000338508 DYRK3O43781 588 aa12.27□□□□□ -0.45
SHANK2-201ENST00000338508 ABCB1P08183 1280 aaPredicted RBP12.27□□□□□ -0.45
SHANK2-201ENST00000338508 UBTFL6P0CB48 400 aaPredicted RBP12.27□□□□□ -0.45
SHANK2-201ENST00000338508 PYGMP11217 842 aa12.27□□□□□ -0.45
SHANK2-201ENST00000338508 ZNF200P98182 395 aaPredicted RBP12.27□□□□□ -0.45
SHANK2-201ENST00000338508 CCDC92Q53HC0 331 aaPredicted RBP12.27□□□□□ -0.45
SHANK2-201ENST00000338508 C11orf88Q6PI97 169 aa12.27□□□□□ -0.45
SHANK2-201ENST00000338508 CNOT7Q9UIV1 285 aaKnown RBP12.27□□□□□ -0.45
SHANK2-201ENST00000338508 TSC22D4Q9Y3Q8 395 aa12.27□□□□□ -0.45
SHANK2-201ENST00000338508 CYP51A1Q16850 503 aa12.27□□□□□ -0.45
SHANK2-201ENST00000338508 IPCEF1Q8WWN9 437 aaPredicted RBP12.27□□□□□ -0.45
SHANK2-201ENST00000338508 STRBPQ96SI9 672 aaKnown RBP12.27□□□□□ -0.45
SHANK2-201ENST00000338508 LCMT1Q9UIC8 334 aa12.27□□□□□ -0.45
SHANK2-201ENST00000338508 MYO3BQ8WXR4 1341 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms